Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305C07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    29   0.033
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   5.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 28.7 bits (61), Expect = 0.033
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 402 LANILSLVALKLQHLAVLRVLHDRTVARELLLACPH 295
           L +I   VAL ++HLA  RV+H    AR +L+   H
Sbjct: 594 LLSIARQVALGMEHLAKTRVVHRDLAARNVLVCENH 629


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 84  ILRTQQYILSLITRCYVLADK 22
           I+RT    L  ++RC +L+++
Sbjct: 669 IIRTDHQALKFLSRCRLLSER 689


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 109 LFVSTKRCDTTHSTIYTVTDNALLCAR*QT 20
           +F S   CD  +STI TV+    L  + QT
Sbjct: 291 IFDSIHLCDVCYSTIGTVSKAGELIHQIQT 320


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 109 LFVSTKRCDTTHSTIYTVT 53
           +F S   CD  +STI TV+
Sbjct: 309 IFDSIHLCDVCYSTIGTVS 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,116
Number of Sequences: 336
Number of extensions: 2455
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)