BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS305C05f (374 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 173 2e-43 M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 173 2e-43 BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 173 2e-43 BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 173 2e-43 BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 173 2e-43 AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 173 2e-43 BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein. 32 0.70 X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 31 0.92 BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 31 0.92 BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 31 0.92 AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 31 0.92 AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).). 31 1.6 DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short for... 30 2.1 DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short for... 30 2.1 DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short for... 30 2.1 DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short for... 30 2.1 DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short for... 30 2.1 DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short for... 30 2.1 BX538175-1|CAD98050.1| 627|Homo sapiens hypothetical protein pr... 30 2.1 BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein. 30 2.1 BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 doma... 30 2.1 BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein. 30 2.1 AK223110-1|BAD96830.1| 255|Homo sapiens small nuclear ribonucle... 30 2.1 AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isofo... 30 2.1 AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isofor... 30 2.1 AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form p... 30 2.1 AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form ... 30 2.1 AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 29 3.7 AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 29 3.7 AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 29 3.7 AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 29 3.7 AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 29 3.7 AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 29 3.7 AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 29 3.7 AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 29 3.7 AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 29 3.7 AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 29 3.7 AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 29 3.7 AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 29 3.7 BC068580-1|AAH68580.1| 738|Homo sapiens MGC24039 protein protein. 28 8.6 BC020855-1|AAH20855.1| 507|Homo sapiens MGC24039 protein protein. 28 8.6 AK125323-1|BAC86129.1| 1309|Homo sapiens protein ( Homo sapiens ... 28 8.6 >Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 protein. Length = 194 Score = 173 bits (421), Expect = 2e-43 Identities = 85/113 (75%), Positives = 101/113 (89%), Gaps = 1/113 (0%) Frame = +1 Query: 1 FETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIR 177 FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+R Sbjct: 19 FESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVR 78 Query: 178 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 336 LVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILE Sbjct: 79 LVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131 >M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. Length = 192 Score = 173 bits (421), Expect = 2e-43 Identities = 85/113 (75%), Positives = 101/113 (89%), Gaps = 1/113 (0%) Frame = +1 Query: 1 FETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIR 177 FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+R Sbjct: 17 FESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVR 76 Query: 178 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 336 LVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILE Sbjct: 77 LVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 129 >BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 protein. Length = 194 Score = 173 bits (421), Expect = 2e-43 Identities = 85/113 (75%), Positives = 101/113 (89%), Gaps = 1/113 (0%) Frame = +1 Query: 1 FETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIR 177 FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+R Sbjct: 19 FESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVR 78 Query: 178 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 336 LVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILE Sbjct: 79 LVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131 >BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 protein. Length = 194 Score = 173 bits (421), Expect = 2e-43 Identities = 85/113 (75%), Positives = 101/113 (89%), Gaps = 1/113 (0%) Frame = +1 Query: 1 FETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIR 177 FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+R Sbjct: 19 FESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVR 78 Query: 178 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 336 LVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILE Sbjct: 79 LVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131 >BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 protein. Length = 194 Score = 173 bits (421), Expect = 2e-43 Identities = 85/113 (75%), Positives = 101/113 (89%), Gaps = 1/113 (0%) Frame = +1 Query: 1 FETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIR 177 FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+R Sbjct: 19 FESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVR 78 Query: 178 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 336 LVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILE Sbjct: 79 LVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131 >AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. Length = 194 Score = 173 bits (421), Expect = 2e-43 Identities = 85/113 (75%), Positives = 101/113 (89%), Gaps = 1/113 (0%) Frame = +1 Query: 1 FETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIR 177 FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+R Sbjct: 19 FESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVR 78 Query: 178 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 336 LVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILE Sbjct: 79 LVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131 >BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein. Length = 648 Score = 31.9 bits (69), Expect = 0.70 Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEKK Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKK 645 >X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2 snRNP-specific A' protein. ). Length = 255 Score = 31.5 bits (68), Expect = 0.92 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Frame = +1 Query: 16 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 183 + +LVEL + D A L+ L + NKK +YV P ++ FQK++++ Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 Query: 184 RELEKKFSGK 213 +E EK F GK Sbjct: 156 QEAEKMFKGK 165 >BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucleoprotein polypeptide A' protein. Length = 255 Score = 31.5 bits (68), Expect = 0.92 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Frame = +1 Query: 16 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 183 + +LVEL + D A L+ L + NKK +YV P ++ FQK++++ Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 Query: 184 RELEKKFSGK 213 +E EK F GK Sbjct: 156 QEAEKMFKGK 165 >BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucleoprotein polypeptide A' protein. Length = 255 Score = 31.5 bits (68), Expect = 0.92 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Frame = +1 Query: 16 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 183 + +LVEL + D A L+ L + NKK +YV P ++ FQK++++ Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 Query: 184 RELEKKFSGK 213 +E EK F GK Sbjct: 156 QEAEKMFKGK 165 >AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucleoprotein polypeptide A' variant protein. Length = 255 Score = 31.5 bits (68), Expect = 0.92 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Frame = +1 Query: 16 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 183 + +LVEL + D A L+ L + NKK +YV P ++ FQK++++ Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 Query: 184 RELEKKFSGK 213 +E EK F GK Sbjct: 156 QEAEKMFKGK 165 >AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).). Length = 255 Score = 30.7 bits (66), Expect = 1.6 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Frame = +1 Query: 25 LVELETNSDLKAQLREL-YITKAKEIELHNK--KSIIIY-VPMPKLKAFQKIQIRLVREL 192 LVEL + D A L+ L Y++ + + + K + +IY VP ++ FQK++++ +E Sbjct: 100 LVELG-DLDPLASLKSLTYLSILRNLVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEA 158 Query: 193 EKKFSGK 213 EK F GK Sbjct: 159 EKMFKGK 165 >DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short form variant 5 protein. Length = 1215 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645 >DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short form variant 2 protein. Length = 1178 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 552 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 608 >DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short form variant 7 protein. Length = 1149 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645 >DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short form variant 6 protein. Length = 1144 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645 >DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short form transcript variant 8 protein. Length = 1020 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645 >DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short form protein. Length = 1076 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 587 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 643 >BX538175-1|CAD98050.1| 627|Homo sapiens hypothetical protein protein. Length = 627 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 444 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 500 >BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein. Length = 1144 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645 >BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 domain protein) protein. Length = 1721 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645 >BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein. Length = 1716 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645 >AK223110-1|BAD96830.1| 255|Homo sapiens small nuclear ribonucleoprotein polypeptide A' variant protein. Length = 255 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Frame = +1 Query: 16 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 183 + +LVEL + D A L+ L + NKK +YV P ++ FQ+++++ Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQRVKLKER 155 Query: 184 RELEKKFSGK 213 +E EK F GK Sbjct: 156 QEAEKMFKGK 165 >AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isoform protein. Length = 1220 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645 >AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isoform protein. Length = 1721 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645 >AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form protein. Length = 1721 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645 >AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form protein. Length = 1220 Score = 30.3 bits (65), Expect = 2.1 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 28 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201 VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+ Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645 >AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) protein. Length = 3174 Score = 29.5 bits (63), Expect = 3.7 Identities = 23/89 (25%), Positives = 42/89 (47%) Frame = +1 Query: 52 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231 L + + + +EL +K + + V MPK K + K+ + +R +KK G + Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789 Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318 + +PKP T V+ K + +T TS+ Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816 >AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) protein. Length = 3095 Score = 29.5 bits (63), Expect = 3.7 Identities = 23/89 (25%), Positives = 42/89 (47%) Frame = +1 Query: 52 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231 L + + + +EL +K + + V MPK K + K+ + +R +KK G + Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789 Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318 + +PKP T V+ K + +T TS+ Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816 >AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) protein. Length = 3174 Score = 29.5 bits (63), Expect = 3.7 Identities = 23/89 (25%), Positives = 42/89 (47%) Frame = +1 Query: 52 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231 L + + + +EL +K + + V MPK K + K+ + +R +KK G + Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789 Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318 + +PKP T V+ K + +T TS+ Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816 >AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) protein. Length = 3095 Score = 29.5 bits (63), Expect = 3.7 Identities = 23/89 (25%), Positives = 42/89 (47%) Frame = +1 Query: 52 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231 L + + + +EL +K + + V MPK K + K+ + +R +KK G + Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789 Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318 + +PKP T V+ K + +T TS+ Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816 >AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) protein. Length = 3174 Score = 29.5 bits (63), Expect = 3.7 Identities = 23/89 (25%), Positives = 42/89 (47%) Frame = +1 Query: 52 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231 L + + + +EL +K + + V MPK K + K+ + +R +KK G + Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789 Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318 + +PKP T V+ K + +T TS+ Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816 >AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) protein. Length = 3095 Score = 29.5 bits (63), Expect = 3.7 Identities = 23/89 (25%), Positives = 42/89 (47%) Frame = +1 Query: 52 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231 L + + + +EL +K + + V MPK K + K+ + +R +KK G + Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789 Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318 + +PKP T V+ K + +T TS+ Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816 >AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa protein. Length = 2442 Score = 29.5 bits (63), Expect = 3.7 Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Frame = +1 Query: 4 ETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQK--IQIR 177 + + +A +EL + DLK + +E+ + + + EL +S++ ++PM + QK +Q Sbjct: 1450 QREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQRE 1508 Query: 178 LVRELEK 198 +RELEK Sbjct: 1509 QIRELEK 1515 >AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. Length = 3069 Score = 29.5 bits (63), Expect = 3.7 Identities = 23/89 (25%), Positives = 42/89 (47%) Frame = +1 Query: 52 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231 L + + + +EL +K + + V MPK K + K+ + +R +KK G + Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789 Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318 + +PKP T V+ K + +T TS+ Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816 >AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. Length = 3135 Score = 29.5 bits (63), Expect = 3.7 Identities = 23/89 (25%), Positives = 42/89 (47%) Frame = +1 Query: 52 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231 L + + + +EL +K + + V MPK K + K+ + +R +KK G + Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789 Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318 + +PKP T V+ K + +T TS+ Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816 >AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis protein. Length = 3174 Score = 29.5 bits (63), Expect = 3.7 Identities = 23/89 (25%), Positives = 42/89 (47%) Frame = +1 Query: 52 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231 L + + + +EL +K + + V MPK K + K+ + +R +KK G + Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789 Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318 + +PKP T V+ K + +T TS+ Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816 >AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated protein 1 protein. Length = 2442 Score = 29.5 bits (63), Expect = 3.7 Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Frame = +1 Query: 4 ETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQK--IQIR 177 + + +A +EL + DLK + +E+ + + + EL +S++ ++PM + QK +Q Sbjct: 1450 QREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQRE 1508 Query: 178 LVRELEK 198 +RELEK Sbjct: 1509 QIRELEK 1515 >AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. Length = 3095 Score = 29.5 bits (63), Expect = 3.7 Identities = 23/89 (25%), Positives = 42/89 (47%) Frame = +1 Query: 52 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231 L + + + +EL +K + + V MPK K + K+ + +R +KK G + Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789 Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318 + +PKP T V+ K + +T TS+ Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816 >BC068580-1|AAH68580.1| 738|Homo sapiens MGC24039 protein protein. Length = 738 Score = 28.3 bits (60), Expect = 8.6 Identities = 19/59 (32%), Positives = 31/59 (52%) Frame = +1 Query: 10 SISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 186 S++ +L E +T S LK Q Y L+ KSI + P+P ++A +K I+L + Sbjct: 179 SLASSLDEGDTTSLLKLQRYNSY--DISRDTLYVSKSICLITPLPFMQACKKFLIQLYK 235 >BC020855-1|AAH20855.1| 507|Homo sapiens MGC24039 protein protein. Length = 507 Score = 28.3 bits (60), Expect = 8.6 Identities = 19/59 (32%), Positives = 31/59 (52%) Frame = +1 Query: 10 SISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 186 S++ +L E +T S LK Q Y L+ KSI + P+P ++A +K I+L + Sbjct: 79 SLASSLDEGDTTSLLKLQRYNSY--DISRDTLYVSKSICLITPLPFMQACKKFLIQLYK 135 >AK125323-1|BAC86129.1| 1309|Homo sapiens protein ( Homo sapiens cDNA FLJ43333 fis, clone NT2RI3006376. ). Length = 1309 Score = 28.3 bits (60), Expect = 8.6 Identities = 19/59 (32%), Positives = 31/59 (52%) Frame = +1 Query: 10 SISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 186 S++ +L E +T S LK Q Y L+ KSI + P+P ++A +K I+L + Sbjct: 192 SLASSLDEGDTTSLLKLQRYNSY--DISRDTLYVSKSICLITPLPFMQACKKFLIQLYK 248 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 56,320,220 Number of Sequences: 237096 Number of extensions: 1144137 Number of successful extensions: 2463 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 2371 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2457 length of database: 76,859,062 effective HSP length: 81 effective length of database: 57,654,286 effective search space used: 2479134298 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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