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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305C05f
         (374 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z25749-1|CAA81022.1|  194|Homo sapiens ribosomal protein S7 prot...   173   2e-43
M77233-1|AAB00969.1|  192|Homo sapiens ribosomal protein protein.     173   2e-43
BC071919-1|AAH71919.1|  194|Homo sapiens ribosomal protein S7 pr...   173   2e-43
BC061901-1|AAH61901.1|  194|Homo sapiens ribosomal protein S7 pr...   173   2e-43
BC002866-1|AAH02866.1|  194|Homo sapiens ribosomal protein S7 pr...   173   2e-43
AC108488-2|AAX82027.1|  194|Homo sapiens unknown protein.             173   2e-43
BC073744-1|AAH73744.1|  648|Homo sapiens ITSN1 protein protein.        32   0.70 
X13482-1|CAA31838.1|  255|Homo sapiens protein ( Human mRNA for ...    31   0.92 
BC071717-1|AAH71717.1|  255|Homo sapiens small nuclear ribonucle...    31   0.92 
BC022816-1|AAH22816.1|  255|Homo sapiens small nuclear ribonucle...    31   0.92 
AK223070-1|BAD96790.1|  255|Homo sapiens small nuclear ribonucle...    31   0.92 
AL078621-9|CAB81646.1|  255|Homo sapiens protein ( G islands.  ).).    31   1.6  
DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short for...    30   2.1  
DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short for...    30   2.1  
DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short for...    30   2.1  
DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short for...    30   2.1  
DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short for...    30   2.1  
DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short for...    30   2.1  
BX538175-1|CAD98050.1|  627|Homo sapiens hypothetical protein pr...    30   2.1  
BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein.        30   2.1  
BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 doma...    30   2.1  
BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein.        30   2.1  
AK223110-1|BAD96830.1|  255|Homo sapiens small nuclear ribonucle...    30   2.1  
AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isofo...    30   2.1  
AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isofor...    30   2.1  
AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form p...    30   2.1  
AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form ...    30   2.1  
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin...    29   3.7  
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin...    29   3.7  
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin...    29   3.7  
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin...    29   3.7  
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin...    29   3.7  
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin...    29   3.7  
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250...    29   3.7  
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.           29   3.7  
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.           29   3.7  
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p...    29   3.7  
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ...    29   3.7  
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.              29   3.7  
BC068580-1|AAH68580.1|  738|Homo sapiens MGC24039 protein protein.     28   8.6  
BC020855-1|AAH20855.1|  507|Homo sapiens MGC24039 protein protein.     28   8.6  
AK125323-1|BAC86129.1| 1309|Homo sapiens protein ( Homo sapiens ...    28   8.6  

>Z25749-1|CAA81022.1|  194|Homo sapiens ribosomal protein S7
           protein.
          Length = 194

 Score =  173 bits (421), Expect = 2e-43
 Identities = 85/113 (75%), Positives = 101/113 (89%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   FETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIR 177
           FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+   +K+III+VP+P+LK+FQKIQ+R
Sbjct: 19  FESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVR 78

Query: 178 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 336
           LVRELEKKFSGKHVVF+  R+ILPKP+ K+R  NKQKRPRSRTLT+V+DAILE
Sbjct: 79  LVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131


>M77233-1|AAB00969.1|  192|Homo sapiens ribosomal protein protein.
          Length = 192

 Score =  173 bits (421), Expect = 2e-43
 Identities = 85/113 (75%), Positives = 101/113 (89%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   FETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIR 177
           FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+   +K+III+VP+P+LK+FQKIQ+R
Sbjct: 17  FESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVR 76

Query: 178 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 336
           LVRELEKKFSGKHVVF+  R+ILPKP+ K+R  NKQKRPRSRTLT+V+DAILE
Sbjct: 77  LVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 129


>BC071919-1|AAH71919.1|  194|Homo sapiens ribosomal protein S7
           protein.
          Length = 194

 Score =  173 bits (421), Expect = 2e-43
 Identities = 85/113 (75%), Positives = 101/113 (89%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   FETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIR 177
           FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+   +K+III+VP+P+LK+FQKIQ+R
Sbjct: 19  FESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVR 78

Query: 178 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 336
           LVRELEKKFSGKHVVF+  R+ILPKP+ K+R  NKQKRPRSRTLT+V+DAILE
Sbjct: 79  LVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131


>BC061901-1|AAH61901.1|  194|Homo sapiens ribosomal protein S7
           protein.
          Length = 194

 Score =  173 bits (421), Expect = 2e-43
 Identities = 85/113 (75%), Positives = 101/113 (89%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   FETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIR 177
           FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+   +K+III+VP+P+LK+FQKIQ+R
Sbjct: 19  FESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVR 78

Query: 178 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 336
           LVRELEKKFSGKHVVF+  R+ILPKP+ K+R  NKQKRPRSRTLT+V+DAILE
Sbjct: 79  LVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131


>BC002866-1|AAH02866.1|  194|Homo sapiens ribosomal protein S7
           protein.
          Length = 194

 Score =  173 bits (421), Expect = 2e-43
 Identities = 85/113 (75%), Positives = 101/113 (89%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   FETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIR 177
           FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+   +K+III+VP+P+LK+FQKIQ+R
Sbjct: 19  FESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVR 78

Query: 178 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 336
           LVRELEKKFSGKHVVF+  R+ILPKP+ K+R  NKQKRPRSRTLT+V+DAILE
Sbjct: 79  LVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131


>AC108488-2|AAX82027.1|  194|Homo sapiens unknown protein.
          Length = 194

 Score =  173 bits (421), Expect = 2e-43
 Identities = 85/113 (75%), Positives = 101/113 (89%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   FETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIR 177
           FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+   +K+III+VP+P+LK+FQKIQ+R
Sbjct: 19  FESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVR 78

Query: 178 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 336
           LVRELEKKFSGKHVVF+  R+ILPKP+ K+R  NKQKRPRSRTLT+V+DAILE
Sbjct: 79  LVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131


>BC073744-1|AAH73744.1|  648|Homo sapiens ITSN1 protein protein.
          Length = 648

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEKK
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKK 645


>X13482-1|CAA31838.1|  255|Homo sapiens protein ( Human mRNA for U2
           snRNP-specific A' protein. ).
          Length = 255

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +1

Query: 16  SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 183
           + +LVEL  + D  A L+ L         + NKK   +YV    P  ++  FQK++++  
Sbjct: 97  NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155

Query: 184 RELEKKFSGK 213
           +E EK F GK
Sbjct: 156 QEAEKMFKGK 165


>BC071717-1|AAH71717.1|  255|Homo sapiens small nuclear
           ribonucleoprotein polypeptide A' protein.
          Length = 255

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +1

Query: 16  SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 183
           + +LVEL  + D  A L+ L         + NKK   +YV    P  ++  FQK++++  
Sbjct: 97  NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155

Query: 184 RELEKKFSGK 213
           +E EK F GK
Sbjct: 156 QEAEKMFKGK 165


>BC022816-1|AAH22816.1|  255|Homo sapiens small nuclear
           ribonucleoprotein polypeptide A' protein.
          Length = 255

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +1

Query: 16  SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 183
           + +LVEL  + D  A L+ L         + NKK   +YV    P  ++  FQK++++  
Sbjct: 97  NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155

Query: 184 RELEKKFSGK 213
           +E EK F GK
Sbjct: 156 QEAEKMFKGK 165


>AK223070-1|BAD96790.1|  255|Homo sapiens small nuclear
           ribonucleoprotein polypeptide A' variant protein.
          Length = 255

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +1

Query: 16  SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 183
           + +LVEL  + D  A L+ L         + NKK   +YV    P  ++  FQK++++  
Sbjct: 97  NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155

Query: 184 RELEKKFSGK 213
           +E EK F GK
Sbjct: 156 QEAEKMFKGK 165


>AL078621-9|CAB81646.1|  255|Homo sapiens protein ( G islands.  ).).
          Length = 255

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
 Frame = +1

Query: 25  LVELETNSDLKAQLREL-YITKAKEIELHNK--KSIIIY-VPMPKLKAFQKIQIRLVREL 192
           LVEL  + D  A L+ L Y++  + +  + K  +  +IY VP  ++  FQK++++  +E 
Sbjct: 100 LVELG-DLDPLASLKSLTYLSILRNLVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEA 158

Query: 193 EKKFSGK 213
           EK F GK
Sbjct: 159 EKMFKGK 165


>DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short form
           variant 5 protein.
          Length = 1215

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645


>DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short form
           variant 2 protein.
          Length = 1178

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 552 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 608


>DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short form
           variant 7 protein.
          Length = 1149

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645


>DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short form
           variant 6 protein.
          Length = 1144

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645


>DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short form
           transcript variant 8 protein.
          Length = 1020

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645


>DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short form
           protein.
          Length = 1076

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 587 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 643


>BX538175-1|CAD98050.1|  627|Homo sapiens hypothetical protein
           protein.
          Length = 627

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 444 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 500


>BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein.
          Length = 1144

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645


>BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 domain
           protein) protein.
          Length = 1721

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645


>BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein.
          Length = 1716

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645


>AK223110-1|BAD96830.1|  255|Homo sapiens small nuclear
           ribonucleoprotein polypeptide A' variant protein.
          Length = 255

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +1

Query: 16  SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 183
           + +LVEL  + D  A L+ L         + NKK   +YV    P  ++  FQ+++++  
Sbjct: 97  NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQRVKLKER 155

Query: 184 RELEKKFSGK 213
           +E EK F GK
Sbjct: 156 QEAEKMFKGK 165


>AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isoform
           protein.
          Length = 1220

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645


>AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isoform
           protein.
          Length = 1721

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645


>AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form
           protein.
          Length = 1721

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645


>AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form
           protein.
          Length = 1220

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 28  VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 201
           VE ET S  K Q  +++  + KE+ E+HNK+ +     M   +  QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645


>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting
           13 homolog A (S. cerevisiae) protein.
          Length = 3174

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/89 (25%), Positives = 42/89 (47%)
 Frame = +1

Query: 52  LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231
           L    + + +     +EL +K  + + V MPK K + K+ +  +R  +KK  G   +   
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789

Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318
             + +PKP   T V+   K  + +T TS+
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816


>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting
           13 homolog A (S. cerevisiae) protein.
          Length = 3095

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/89 (25%), Positives = 42/89 (47%)
 Frame = +1

Query: 52  LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231
           L    + + +     +EL +K  + + V MPK K + K+ +  +R  +KK  G   +   
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789

Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318
             + +PKP   T V+   K  + +T TS+
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816


>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting
           13 homolog A (S. cerevisiae) protein.
          Length = 3174

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/89 (25%), Positives = 42/89 (47%)
 Frame = +1

Query: 52  LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231
           L    + + +     +EL +K  + + V MPK K + K+ +  +R  +KK  G   +   
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789

Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318
             + +PKP   T V+   K  + +T TS+
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816


>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting
           13 homolog A (S. cerevisiae) protein.
          Length = 3095

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/89 (25%), Positives = 42/89 (47%)
 Frame = +1

Query: 52  LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231
           L    + + +     +EL +K  + + V MPK K + K+ +  +R  +KK  G   +   
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789

Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318
             + +PKP   T V+   K  + +T TS+
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816


>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting
           13 homolog A (S. cerevisiae) protein.
          Length = 3174

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/89 (25%), Positives = 42/89 (47%)
 Frame = +1

Query: 52  LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231
           L    + + +     +EL +K  + + V MPK K + K+ +  +R  +KK  G   +   
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789

Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318
             + +PKP   T V+   K  + +T TS+
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816


>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting
           13 homolog A (S. cerevisiae) protein.
          Length = 3095

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/89 (25%), Positives = 42/89 (47%)
 Frame = +1

Query: 52  LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231
           L    + + +     +EL +K  + + V MPK K + K+ +  +R  +KK  G   +   
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789

Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318
             + +PKP   T V+   K  + +T TS+
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816


>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
            protein.
          Length = 2442

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
 Frame = +1

Query: 4    ETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQK--IQIR 177
            +  + +A +EL  + DLK + +E+ + + +  EL   +S++ ++PM   +  QK  +Q  
Sbjct: 1450 QREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQRE 1508

Query: 178  LVRELEK 198
             +RELEK
Sbjct: 1509 QIRELEK 1515


>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
          Length = 3069

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/89 (25%), Positives = 42/89 (47%)
 Frame = +1

Query: 52  LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231
           L    + + +     +EL +K  + + V MPK K + K+ +  +R  +KK  G   +   
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789

Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318
             + +PKP   T V+   K  + +T TS+
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816


>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
          Length = 3135

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/89 (25%), Positives = 42/89 (47%)
 Frame = +1

Query: 52  LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231
           L    + + +     +EL +K  + + V MPK K + K+ +  +R  +KK  G   +   
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789

Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318
             + +PKP   T V+   K  + +T TS+
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816


>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
           protein.
          Length = 3174

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/89 (25%), Positives = 42/89 (47%)
 Frame = +1

Query: 52  LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231
           L    + + +     +EL +K  + + V MPK K + K+ +  +R  +KK  G   +   
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789

Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318
             + +PKP   T V+   K  + +T TS+
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816


>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
            protein 1 protein.
          Length = 2442

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
 Frame = +1

Query: 4    ETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQK--IQIR 177
            +  + +A +EL  + DLK + +E+ + + +  EL   +S++ ++PM   +  QK  +Q  
Sbjct: 1450 QREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQRE 1508

Query: 178  LVRELEK 198
             +RELEK
Sbjct: 1509 QIRELEK 1515


>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
          Length = 3095

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/89 (25%), Positives = 42/89 (47%)
 Frame = +1

Query: 52  LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 231
           L    + + +     +EL +K  + + V MPK K + K+ +  +R  +KK  G   +   
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789

Query: 232 DRKILPKPSHKTRVANKQKRPRSRTLTSV 318
             + +PKP   T V+   K  + +T TS+
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSL 816


>BC068580-1|AAH68580.1|  738|Homo sapiens MGC24039 protein protein.
          Length = 738

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = +1

Query: 10  SISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 186
           S++ +L E +T S LK Q    Y        L+  KSI +  P+P ++A +K  I+L +
Sbjct: 179 SLASSLDEGDTTSLLKLQRYNSY--DISRDTLYVSKSICLITPLPFMQACKKFLIQLYK 235


>BC020855-1|AAH20855.1|  507|Homo sapiens MGC24039 protein protein.
          Length = 507

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = +1

Query: 10  SISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 186
           S++ +L E +T S LK Q    Y        L+  KSI +  P+P ++A +K  I+L +
Sbjct: 79  SLASSLDEGDTTSLLKLQRYNSY--DISRDTLYVSKSICLITPLPFMQACKKFLIQLYK 135


>AK125323-1|BAC86129.1| 1309|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43333 fis, clone NT2RI3006376. ).
          Length = 1309

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = +1

Query: 10  SISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 186
           S++ +L E +T S LK Q    Y        L+  KSI +  P+P ++A +K  I+L +
Sbjct: 192 SLASSLDEGDTTSLLKLQRYNSY--DISRDTLYVSKSICLITPLPFMQACKKFLIQLYK 248


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,320,220
Number of Sequences: 237096
Number of extensions: 1144137
Number of successful extensions: 2463
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2457
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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