Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305C05f
(374 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 138 1e-33
U41263-5|AAC24427.1| 400|Caenorhabditis elegans Hypothetical pr... 27 4.4
AL034488-17|CAA22459.2| 316|Caenorhabditis elegans Hypothetical... 27 5.8
AL034488-16|CAN99708.1| 317|Caenorhabditis elegans Hypothetical... 27 5.8
AL034393-8|CAA22313.1| 241|Caenorhabditis elegans Hypothetical ... 27 5.8
AF098506-1|ABN43085.1| 145|Caenorhabditis elegans Hypothetical ... 27 5.8
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 26 7.6
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 26 7.6
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 26 7.6
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 26 7.6
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 26 7.6
AF038611-5|AAT27250.1| 760|Caenorhabditis elegans Homolog of el... 26 7.6
AF038611-4|AAB92042.3| 833|Caenorhabditis elegans Homolog of el... 26 7.6
>Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical
protein ZC434.2 protein.
Length = 194
Score = 138 bits (334), Expect = 1e-33
Identities = 66/112 (58%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Frame = +1
Query: 4 ETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLV 183
E +SQAL++LETN D+++QL+ELYI KE+EL NK +IIIYVP+P+LKAF KI LV
Sbjct: 20 EKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVPQLKAFHKIHPALV 79
Query: 184 RELEKKFSGKHVVFVGDRKILPKPSHKTRV-ANKQKRPRSRTLTSVYDAILE 336
RELEKKF G+ ++ + R+ILPKP ++ KQKRPRSRTLT+V+DA L+
Sbjct: 80 RELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVHDAWLD 131
>U41263-5|AAC24427.1| 400|Caenorhabditis elegans Hypothetical
protein T19D12.7 protein.
Length = 400
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 252 LRQDLTVSNKDYMFTTELLFELTDKPDLDLLKGLQFRHRHIDD 124
L+QD K +MF +F DK +D + L+F+ + DD
Sbjct: 167 LQQDFRSFQKVWMFNKTEMFSADDKTFIDSNRSLEFQVLNEDD 209
>AL034488-17|CAA22459.2| 316|Caenorhabditis elegans Hypothetical
protein Y54G11A.10b protein.
Length = 316
Score = 26.6 bits (56), Expect = 5.8
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +1
Query: 94 EIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKT 267
E E H K ++ + +K + +L+ E+E++F + + LP PS T
Sbjct: 255 EAECHEKAVDLLKSAVGSVKLVIRYMPKLLDEMERRFERQRIRSTQQSPTLPTPSSST 312
>AL034488-16|CAN99708.1| 317|Caenorhabditis elegans Hypothetical
protein Y54G11A.10a protein.
Length = 317
Score = 26.6 bits (56), Expect = 5.8
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +1
Query: 94 EIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKT 267
E E H K ++ + +K + +L+ E+E++F + + LP PS T
Sbjct: 256 EAECHEKAVDLLKSAVGSVKLVIRYMPKLLDEMERRFERQRIRSTQQSPTLPTPSSST 313
>AL034393-8|CAA22313.1| 241|Caenorhabditis elegans Hypothetical
protein Y18D10A.10 protein.
Length = 241
Score = 26.6 bits (56), Expect = 5.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 263 LWLGLGRILRSPTKTTCLPLNFF 195
+W+G R R P K +C PL+ F
Sbjct: 143 VWVGAYRKARCPNKPSCTPLDTF 165
>AF098506-1|ABN43085.1| 145|Caenorhabditis elegans Hypothetical
protein H29C22.1 protein.
Length = 145
Score = 26.6 bits (56), Expect = 5.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 16 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 135
S+A ++LE N D+ E + K + E +NK+ + Y+
Sbjct: 33 SRAAIKLENNDDVPELFHENFEFKTCKEERYNKEQTVDYI 72
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 26.2 bits (55), Expect = 7.6
Identities = 16/74 (21%), Positives = 32/74 (43%)
Frame = +1
Query: 7 TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 186
TSI Q L+ ++ + + E ++ +K+IE+H + + + QK ++LV
Sbjct: 2214 TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDYEKTQKYDLKLVA 2273
Query: 187 ELEKKFSGKHVVFV 228
K F+
Sbjct: 2274 TSSGKQVSSEAEFI 2287
>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical protein
T02C12.1 protein.
Length = 1017
Score = 26.2 bits (55), Expect = 7.6
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +1
Query: 55 KAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGD 234
K+ LR L +T +L NKK ++ P+P L++ +I + + +G V+ VGD
Sbjct: 878 KSSLRVLIVTDRFVAKLENKKFKLLKEPIP-LQSISRISVC------AESNGLFVIHVGD 930
Query: 235 RKIL 246
I+
Sbjct: 931 NDIV 934
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 26.2 bits (55), Expect = 7.6
Identities = 16/74 (21%), Positives = 32/74 (43%)
Frame = +1
Query: 7 TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 186
TSI Q L+ ++ + + E ++ +K+IE+H + + + QK ++LV
Sbjct: 2214 TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDYEKTQKYDLKLVA 2273
Query: 187 ELEKKFSGKHVVFV 228
K F+
Sbjct: 2274 TSSGKQVSSEAEFI 2287
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 26.2 bits (55), Expect = 7.6
Identities = 16/74 (21%), Positives = 32/74 (43%)
Frame = +1
Query: 7 TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 186
TSI Q L+ ++ + + E ++ +K+IE+H + + + QK ++LV
Sbjct: 2214 TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDYEKTQKYDLKLVA 2273
Query: 187 ELEKKFSGKHVVFV 228
K F+
Sbjct: 2274 TSSGKQVSSEAEFI 2287
>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
Length = 1017
Score = 26.2 bits (55), Expect = 7.6
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +1
Query: 55 KAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGD 234
K+ LR L +T +L NKK ++ P+P L++ +I + + +G V+ VGD
Sbjct: 878 KSSLRVLIVTDRFVAKLENKKFKLLKEPIP-LQSISRISVC------AESNGLFVIHVGD 930
Query: 235 RKIL 246
I+
Sbjct: 931 NDIV 934
>AF038611-5|AAT27250.1| 760|Caenorhabditis elegans Homolog of elac2
(cancer susceptibilitylocus) protein 1, isoform b
protein.
Length = 760
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 139 MPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRK 240
+ +LKA Q R+ + +GK +VF GD K
Sbjct: 593 LDELKAVQVHHTRMANGFVMRVAGKRIVFSGDTK 626
>AF038611-4|AAB92042.3| 833|Caenorhabditis elegans Homolog of elac2
(cancer susceptibilitylocus) protein 1, isoform a
protein.
Length = 833
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 139 MPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRK 240
+ +LKA Q R+ + +GK +VF GD K
Sbjct: 666 LDELKAVQVHHTRMANGFVMRVAGKRIVFSGDTK 699
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,670,252
Number of Sequences: 27780
Number of extensions: 164387
Number of successful extensions: 477
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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