Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305C04f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118309-1|AAM48338.1|  779|Drosophila melanogaster GH14362p pro...    28   6.7  
AY061021-1|AAL28569.1|  402|Drosophila melanogaster HL04393p pro...    28   6.7  
AE014298-1620|AAN09633.2|  779|Drosophila melanogaster CG11727-P...    28   6.7  
AE014298-1619|AAF48044.3|  807|Drosophila melanogaster CG11727-P...    28   6.7  

>AY118309-1|AAM48338.1|  779|Drosophila melanogaster GH14362p
           protein.
          Length = 779

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 303 KQRTQETFSRVSKLKAENQVLEEKVNFIKTTSVPERLV---FCSSKERHH 443
           KQR QE  S+  +  AENQ  E +       S P++L+   F SSK   H
Sbjct: 564 KQRVQELSSQWQRQLAENQRSESERTTNAVDSTPKKLLTNFFDSSKSSEH 613


>AY061021-1|AAL28569.1|  402|Drosophila melanogaster HL04393p
           protein.
          Length = 402

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 303 KQRTQETFSRVSKLKAENQVLEEKVNFIKTTSVPERLV---FCSSKERHH 443
           KQR QE  S+  +  AENQ  E +       S P++L+   F SSK   H
Sbjct: 187 KQRVQELSSQWQRQLAENQRSESERTTNAVDSTPKKLLTNFFDSSKSSEH 236


>AE014298-1620|AAN09633.2|  779|Drosophila melanogaster CG11727-PB,
           isoform B protein.
          Length = 779

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 303 KQRTQETFSRVSKLKAENQVLEEKVNFIKTTSVPERLV---FCSSKERHH 443
           KQR QE  S+  +  AENQ  E +       S P++L+   F SSK   H
Sbjct: 564 KQRVQELSSQWQRQLAENQRSESERTTNAVDSTPKKLLTNFFDSSKSSEH 613


>AE014298-1619|AAF48044.3|  807|Drosophila melanogaster CG11727-PA,
           isoform A protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 303 KQRTQETFSRVSKLKAENQVLEEKVNFIKTTSVPERLV---FCSSKERHH 443
           KQR QE  S+  +  AENQ  E +       S P++L+   F SSK   H
Sbjct: 564 KQRVQELSSQWQRQLAENQRSESERTTNAVDSTPKKLLTNFFDSSKSSEH 613


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,324,504
Number of Sequences: 53049
Number of extensions: 273427
Number of successful extensions: 643
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)