Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305C01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   3.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   3.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.6  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.7  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 400 TVKGSDWLGDQDAI 441
           T+ G+DWL +Q A+
Sbjct: 178 TILGADWLNEQRAV 191


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 231  WWSRTSSSLW 260
            WWS T++S W
Sbjct: 1042 WWSSTTTSPW 1051


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 283 F*ILLGQDQRLLEVLLHQPQ 224
           F + LGQ  ++  V+ H PQ
Sbjct: 8   FAMTLGQQNKMYNVIQHSPQ 27


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -3

Query: 216 CIMFVVNYCVC 184
           C+   +NYC+C
Sbjct: 40  CLNLSINYCIC 50


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 402 CVIHMPEPTVFLHIAQSSINSTLCS 328
           CV+   E  V+LH+   S    +C+
Sbjct: 263 CVLVQSEKIVWLHLVYISFLGIICA 287


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +2

Query: 317 HILLLHRVELMLLWAIWRKTVGSGI 391
           HI    R +++  W +W+    SG+
Sbjct: 399 HIQCGRRADVLKFWFMWKAKGTSGL 423


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,790
Number of Sequences: 336
Number of extensions: 2462
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)