Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305C01f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21936-1|AAA20683.1| 664|Homo sapiens succinate dehydrogenase f... 161 1e-39
D30648-1|BAA06332.1| 664|Homo sapiens flavoprotein subunit of c... 161 1e-39
BC001380-1|AAH01380.1| 664|Homo sapiens succinate dehydrogenase... 161 1e-39
AF171030-1|AAD51006.1| 664|Homo sapiens succinate dehydrogenase... 161 1e-39
AB208991-1|BAD92228.1| 670|Homo sapiens succinate dehydrogenase... 161 1e-39
DQ402982-1|ABD77315.1| 550|Homo sapiens succinate dehydrogenase... 146 5e-35
BC041016-1|AAH41016.1| 519|Homo sapiens SDHA protein protein. 105 9e-23
BC062438-1|AAH62438.1| 144|Homo sapiens SDHALP2 protein protein. 85 1e-16
BC053551-1|AAH53551.1| 148|Homo sapiens SDHALP2 protein protein. 85 1e-16
AK130817-1|BAC85436.1| 478|Homo sapiens protein ( Homo sapiens ... 29 9.9
>L21936-1|AAA20683.1| 664|Homo sapiens succinate dehydrogenase
flavoprotein subunit protein.
Length = 664
Score = 161 bits (392), Expect = 1e-39
Identities = 80/154 (51%), Positives = 95/154 (61%)
Frame = +1
Query: 31 VRTESSIMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKH 210
VR S ++S A P L + R H G A V+ +++ Y V+DH+
Sbjct: 4 VRGLSRLLSARRLALAKAWPTVLQTGT-RGFHFTVDGNKRASAKVSDSISAQYPVVDHEF 62
Query: 211 DXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWH 390
D + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH
Sbjct: 63 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 122
Query: 391 MYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNY 492
YDTVKGSDWLGDQDAIHYMT++AP AV+EL+NY
Sbjct: 123 FYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENY 156
>D30648-1|BAA06332.1| 664|Homo sapiens flavoprotein subunit of
complex II protein.
Length = 664
Score = 161 bits (392), Expect = 1e-39
Identities = 80/154 (51%), Positives = 95/154 (61%)
Frame = +1
Query: 31 VRTESSIMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKH 210
VR S ++S A P L + R H G A V+ +++ Y V+DH+
Sbjct: 4 VRGLSRLLSARRLALAKAWPTVLQTGT-RGFHFTVDGNKRASAKVSDSISAQYPVVDHEF 62
Query: 211 DXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWH 390
D + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH
Sbjct: 63 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 122
Query: 391 MYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNY 492
YDTVKGSDWLGDQDAIHYMT++AP AV+EL+NY
Sbjct: 123 FYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENY 156
>BC001380-1|AAH01380.1| 664|Homo sapiens succinate dehydrogenase
complex, subunit A, flavoprotein (Fp) protein.
Length = 664
Score = 161 bits (392), Expect = 1e-39
Identities = 80/154 (51%), Positives = 95/154 (61%)
Frame = +1
Query: 31 VRTESSIMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKH 210
VR S ++S A P L + R H G A V+ +++ Y V+DH+
Sbjct: 4 VRGLSRLLSARRLALAKAWPTVLQTGT-RGFHFTVDGNKRASAKVSDSISAQYPVVDHEF 62
Query: 211 DXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWH 390
D + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH
Sbjct: 63 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 122
Query: 391 MYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNY 492
YDTVKGSDWLGDQDAIHYMT++AP AV+EL+NY
Sbjct: 123 FYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENY 156
>AF171030-1|AAD51006.1| 664|Homo sapiens succinate dehydrogenase
flavoprotein subunit protein.
Length = 664
Score = 161 bits (392), Expect = 1e-39
Identities = 80/154 (51%), Positives = 95/154 (61%)
Frame = +1
Query: 31 VRTESSIMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKH 210
VR S ++S A P L + R H G A V+ +++ Y V+DH+
Sbjct: 4 VRGLSRLLSARRLALAKAWPTVLQTGT-RGFHFTVDGNKRASAKVSDSISAQYPVVDHEF 62
Query: 211 DXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWH 390
D + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH
Sbjct: 63 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 122
Query: 391 MYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNY 492
YDTVKGSDWLGDQDAIHYMT++AP AV+EL+NY
Sbjct: 123 FYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENY 156
>AB208991-1|BAD92228.1| 670|Homo sapiens succinate dehydrogenase
complex, subunit A, flavoprotein precursor variant
protein.
Length = 670
Score = 161 bits (392), Expect = 1e-39
Identities = 80/154 (51%), Positives = 95/154 (61%)
Frame = +1
Query: 31 VRTESSIMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKH 210
VR S ++S A P L + R H G A V+ +++ Y V+DH+
Sbjct: 10 VRGLSRLLSARRLALAKAWPTVLQTGT-RGFHFTVDGNKRASAKVSDSISAQYPVVDHEF 68
Query: 211 DXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWH 390
D + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH
Sbjct: 69 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 128
Query: 391 MYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNY 492
YDTVKGSDWLGDQDAIHYMT++AP AV+EL+NY
Sbjct: 129 FYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENY 162
>DQ402982-1|ABD77315.1| 550|Homo sapiens succinate dehydrogenase
complex subunit A protein.
Length = 550
Score = 146 bits (353), Expect = 5e-35
Identities = 63/75 (84%), Positives = 69/75 (92%)
Frame = +1
Query: 268 QEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVKGSDWLGDQDAIHY 447
+ GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH YDTVKGSDWLGDQDAIHY
Sbjct: 17 EAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHY 76
Query: 448 MTKEAPHAVIELDNY 492
MT++AP AV+EL+NY
Sbjct: 77 MTEQAPAAVVELENY 91
>BC041016-1|AAH41016.1| 519|Homo sapiens SDHA protein protein.
Length = 519
Score = 105 bits (252), Expect = 9e-23
Identities = 56/127 (44%), Positives = 67/127 (52%)
Frame = +1
Query: 31 VRTESSIMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKH 210
VR S ++S A P L + R H G A V+ +++ Y V+DH+
Sbjct: 4 VRGLSRLLSARRLALAKAWPTVLQTGT-RGFHFTVDGNKRASAKVSDSISAQYPVVDHEF 62
Query: 211 DXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWH 390
D + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH
Sbjct: 63 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 122
Query: 391 MYDTVKG 411
YDT G
Sbjct: 123 FYDTSTG 129
>BC062438-1|AAH62438.1| 144|Homo sapiens SDHALP2 protein protein.
Length = 144
Score = 85.0 bits (201), Expect = 1e-16
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +1
Query: 364 MEEDSWLWHMYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNY 492
MEED+W WH YDTVKGSDWLGDQDAIHY+T++AP A++E++NY
Sbjct: 1 MEEDNWRWHFYDTVKGSDWLGDQDAIHYVTEQAPTAMVEVENY 43
>BC053551-1|AAH53551.1| 148|Homo sapiens SDHALP2 protein protein.
Length = 148
Score = 85.0 bits (201), Expect = 1e-16
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +1
Query: 364 MEEDSWLWHMYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNY 492
MEED+W WH YDTVKGSDWLGDQDAIHY+T++AP A++E++NY
Sbjct: 1 MEEDNWRWHFYDTVKGSDWLGDQDAIHYVTEQAPTAMVEVENY 43
>AK130817-1|BAC85436.1| 478|Homo sapiens protein ( Homo sapiens
cDNA FLJ27307 fis, clone TMS05849, highly similar to Ig
gamma-1 chain C region. ).
Length = 478
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +1
Query: 370 EDSWLWHMYDTVKGSDWLG---DQDAIHYMTKEAPHAVIELDNYXNAI 504
+DSW W + +G +WLG D + +Y I +D N +
Sbjct: 52 DDSWSWFRQSSQRGLEWLGYIYDTGSTYYNPSLKSRVTISVDESKNQL 99
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,746,944
Number of Sequences: 237096
Number of extensions: 1544875
Number of successful extensions: 9060
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9060
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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