Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305C01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051472-1|AAK92896.1|  661|Drosophila melanogaster GH13919p pro...   172   2e-43
AE013599-2872|AAN16127.1|  661|Drosophila melanogaster CG17246-P...   172   2e-43
AE013599-2871|AAM70849.1|  661|Drosophila melanogaster CG17246-P...   172   2e-43
AE013599-2870|AAG22257.1|  661|Drosophila melanogaster CG17246-P...   172   2e-43
Y09064-1|CAA70285.1|  509|Drosophila melanogaster succinate dehy...   167   1e-41
AY094732-1|AAM11085.1|  651|Drosophila melanogaster GH25972p pro...   136   1e-32
AE014296-2058|AAF49990.2|  651|Drosophila melanogaster CG5718-PA...   136   1e-32
AE013599-399|AAM68891.2|  409|Drosophila melanogaster CG11112-PB...    26   1.3  

>AY051472-1|AAK92896.1|  661|Drosophila melanogaster GH13919p
           protein.
          Length = 661

 Score =  172 bits (419), Expect = 2e-43
 Identities = 83/148 (56%), Positives = 99/148 (66%)
 Frame = +1

Query: 49  IMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKHDXXXXX 228
           + S L K AV+    + A  + R+ H+   G     A+    ++K Y V+DH +D     
Sbjct: 7   VPSILAKNAVASMQRAAAVGVQRSYHIT-HGRQQASAANPDKISKQYPVVDHAYDAIVVG 65

Query: 229 XXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVK 408
                       V EGF+TAV+TKLFPTRSHT+AAQGGINAALGNMEED W WHMYDTVK
Sbjct: 66  AGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAAQGGINAALGNMEEDDWKWHMYDTVK 125

Query: 409 GSDWLGDQDAIHYMTKEAPHAVIELDNY 492
           GSDWLGDQDAIHYMT+EAP AVIEL+NY
Sbjct: 126 GSDWLGDQDAIHYMTREAPKAVIELENY 153


>AE013599-2872|AAN16127.1|  661|Drosophila melanogaster CG17246-PC,
           isoform C protein.
          Length = 661

 Score =  172 bits (419), Expect = 2e-43
 Identities = 83/148 (56%), Positives = 99/148 (66%)
 Frame = +1

Query: 49  IMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKHDXXXXX 228
           + S L K AV+    + A  + R+ H+   G     A+    ++K Y V+DH +D     
Sbjct: 7   VPSILAKNAVASMQRAAAVGVQRSYHIT-HGRQQASAANPDKISKQYPVVDHAYDAIVVG 65

Query: 229 XXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVK 408
                       V EGF+TAV+TKLFPTRSHT+AAQGGINAALGNMEED W WHMYDTVK
Sbjct: 66  AGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAAQGGINAALGNMEEDDWKWHMYDTVK 125

Query: 409 GSDWLGDQDAIHYMTKEAPHAVIELDNY 492
           GSDWLGDQDAIHYMT+EAP AVIEL+NY
Sbjct: 126 GSDWLGDQDAIHYMTREAPKAVIELENY 153


>AE013599-2871|AAM70849.1|  661|Drosophila melanogaster CG17246-PB,
           isoform B protein.
          Length = 661

 Score =  172 bits (419), Expect = 2e-43
 Identities = 83/148 (56%), Positives = 99/148 (66%)
 Frame = +1

Query: 49  IMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKHDXXXXX 228
           + S L K AV+    + A  + R+ H+   G     A+    ++K Y V+DH +D     
Sbjct: 7   VPSILAKNAVASMQRAAAVGVQRSYHIT-HGRQQASAANPDKISKQYPVVDHAYDAIVVG 65

Query: 229 XXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVK 408
                       V EGF+TAV+TKLFPTRSHT+AAQGGINAALGNMEED W WHMYDTVK
Sbjct: 66  AGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAAQGGINAALGNMEEDDWKWHMYDTVK 125

Query: 409 GSDWLGDQDAIHYMTKEAPHAVIELDNY 492
           GSDWLGDQDAIHYMT+EAP AVIEL+NY
Sbjct: 126 GSDWLGDQDAIHYMTREAPKAVIELENY 153


>AE013599-2870|AAG22257.1|  661|Drosophila melanogaster CG17246-PA,
           isoform A protein.
          Length = 661

 Score =  172 bits (419), Expect = 2e-43
 Identities = 83/148 (56%), Positives = 99/148 (66%)
 Frame = +1

Query: 49  IMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKHDXXXXX 228
           + S L K AV+    + A  + R+ H+   G     A+    ++K Y V+DH +D     
Sbjct: 7   VPSILAKNAVASMQRAAAVGVQRSYHIT-HGRQQASAANPDKISKQYPVVDHAYDAIVVG 65

Query: 229 XXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVK 408
                       V EGF+TAV+TKLFPTRSHT+AAQGGINAALGNMEED W WHMYDTVK
Sbjct: 66  AGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAAQGGINAALGNMEEDDWKWHMYDTVK 125

Query: 409 GSDWLGDQDAIHYMTKEAPHAVIELDNY 492
           GSDWLGDQDAIHYMT+EAP AVIEL+NY
Sbjct: 126 GSDWLGDQDAIHYMTREAPKAVIELENY 153


>Y09064-1|CAA70285.1|  509|Drosophila melanogaster succinate
           dehydrogenase flavoproteinsubunit protein.
          Length = 509

 Score =  167 bits (405), Expect = 1e-41
 Identities = 77/126 (61%), Positives = 89/126 (70%)
 Frame = +1

Query: 115 RNIHVAASGATSKDASVTTNMTKAYTVIDHKHDXXXXXXXXXXXXXXXXXVQEGFKTAVV 294
           R+ H+   G     A+    ++K Y V+DH +D                 V EGF+TAV+
Sbjct: 11  RSYHIT-HGRQQASAANPDKISKQYPVVDHAYDAIVVGAGGAGLRAAFGLVAEGFRTAVI 69

Query: 295 TKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVKGSDWLGDQDAIHYMTKEAPHAV 474
           TKLFPTRSHT+AAQGGINAALGNMEED W WHMYDTVKGSDWLGDQDAIHYMT+EAP AV
Sbjct: 70  TKLFPTRSHTIAAQGGINAALGNMEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAV 129

Query: 475 IELDNY 492
           IEL+NY
Sbjct: 130 IELENY 135


>AY094732-1|AAM11085.1|  651|Drosophila melanogaster GH25972p
           protein.
          Length = 651

 Score =  136 bits (330), Expect = 1e-32
 Identities = 60/102 (58%), Positives = 74/102 (72%)
 Frame = +1

Query: 187 YTVIDHKHDXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNM 366
           Y++IDHK D                  ++GF+TA+++KLFPTRSHTVAAQGG+NAAL NM
Sbjct: 40  YSLIDHKFDAIVIGAGGAGMRAGFGLAEKGFQTAIISKLFPTRSHTVAAQGGVNAALSNM 99

Query: 367 EEDSWLWHMYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNY 492
           ++D W +H YDTVKGSDWLGDQ+AIHYM +EA  AV ELD Y
Sbjct: 100 DKDDWKYHFYDTVKGSDWLGDQNAIHYMCREAERAVCELDMY 141


>AE014296-2058|AAF49990.2|  651|Drosophila melanogaster CG5718-PA
           protein.
          Length = 651

 Score =  136 bits (330), Expect = 1e-32
 Identities = 60/102 (58%), Positives = 74/102 (72%)
 Frame = +1

Query: 187 YTVIDHKHDXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNM 366
           Y++IDHK D                  ++GF+TA+++KLFPTRSHTVAAQGG+NAAL NM
Sbjct: 40  YSLIDHKFDAIVIGAGGAGMRAGFGLAEKGFQTAIISKLFPTRSHTVAAQGGVNAALSNM 99

Query: 367 EEDSWLWHMYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNY 492
           ++D W +H YDTVKGSDWLGDQ+AIHYM +EA  AV ELD Y
Sbjct: 100 DKDDWKYHFYDTVKGSDWLGDQNAIHYMCREAERAVCELDMY 141


>AE013599-399|AAM68891.2|  409|Drosophila melanogaster CG11112-PB,
           isoform B protein.
          Length = 409

 Score = 26.2 bits (55), Expect(2) = 1.3
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -2

Query: 382 ANCLPPYCP 356
           A+CLPPYCP
Sbjct: 360 ASCLPPYCP 368



 Score = 23.0 bits (47), Expect(2) = 1.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 379 NCLPPYCPK 353
           NC  PYCPK
Sbjct: 372 NCQKPYCPK 380


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,390,642
Number of Sequences: 53049
Number of extensions: 460382
Number of successful extensions: 1010
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)