Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305B11f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    28   0.058
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   6.6  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 27.9 bits (59), Expect = 0.058
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 252 PSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQT 380
           P +R P V  +S  + T   +P + NGSSP+ L  +  L  ++
Sbjct: 699 PQQRSPSVTDLSTKDGTT--VPESNNGSSPSVLNAIEKLIEKS 739


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 5   IRHEGQVYQLVPADQYDSIYRQNDRQDEEYE 97
           + +  +  QLV     D IYR+    D++Y+
Sbjct: 105 LNYRNEWNQLVAKYDPDGIYRKQYEIDDDYD 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,654
Number of Sequences: 336
Number of extensions: 2048
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)