Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305B11f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 31 0.58
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 31 0.76
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.0
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 29 2.3
SB_25059| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_17889| Best HMM Match : Patched (HMM E-Value=0.14) 29 2.3
SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0) 29 2.3
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 29 3.1
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_39625| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_25197| Best HMM Match : TatC (HMM E-Value=1.8) 29 3.1
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84) 29 3.1
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 29 3.1
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 28 4.1
SB_52131| Best HMM Match : AIRS_C (HMM E-Value=1.69978e-42) 28 4.1
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_42063| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 27 7.1
SB_49822| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_28082| Best HMM Match : A2M_comp (HMM E-Value=0) 27 9.4
SB_11623| Best HMM Match : ABC1 (HMM E-Value=0) 27 9.4
SB_53747| Best HMM Match : S1-P1_nuclease (HMM E-Value=2.9) 27 9.4
SB_32235| Best HMM Match : Peptidase_A17 (HMM E-Value=4.2e-08) 27 9.4
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 27 9.4
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 31.1 bits (67), Expect = 0.58
Identities = 25/122 (20%), Positives = 45/122 (36%)
Frame = +3
Query: 27 TSSFRLTNTTPYIDRMTAKMKSMSRDQFSGCHPGRSFSPNHSRRGPSSLQCRLLETITR* 206
T++ T TTPY T + + + + + +PN + P++ T T
Sbjct: 122 TTTTTTTTTTPYATTTTPNTTTTTPNTTTTSPNATTTTPNTTTTTPNTTTTTPTATTTTP 181
Query: 207 TTMEVLHSVTRLRMGPSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKR 386
T + T + P T + +T T T T ++ T+ T T+ R
Sbjct: 182 TATTTTPNTTTNTPNATTTTPTATTTTPNATTTTPNTTTTTPNATTTTPTATTMQQSFNR 241
Query: 387 MS 392
+S
Sbjct: 242 VS 243
Score = 27.1 bits (57), Expect = 9.4
Identities = 22/95 (23%), Positives = 38/95 (40%)
Frame = +3
Query: 162 PSSLQCRLLETITR*TTMEVLHSVTRLRMGPSRRRPEVPTVSYAESTATLIPTATNGSSP 341
P +C++L+ ++ V + +R T + TAT+ ++P
Sbjct: 58 PFYYRCKILKEDVAFVESNIIDLVLVVLTVLLKRELIAATATITTYTATVTAPNATTTTP 117
Query: 342 TSLVTLATLTSQTKRMSPKLQHLTPPSATTEYRTT 446
T+ T T T+ T +P TP + TT TT
Sbjct: 118 TATTTTTTTTTTT---TPYATTTTPNTTTTTPNTT 149
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 31.1 bits (67), Expect = 0.58
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Frame = +3
Query: 108 FSGCHPGRSFSPNHSRRGPS--SLQCRLLETITR*TTMEVLHSVTRLRMGPSRRRPEVPT 281
++ C + + HS PS SL T+T T + + R+ + ++PT
Sbjct: 1689 YAQCQSSIAKNSVHSIPSPSRPSLNIAPSSTLTPSTAGHTIDIRSTNRVHSRAQEGQIPT 1748
Query: 282 VSYAESTATLIPTA---TNGSSPTSLVTLATLTSQTKRMSPKLQHLTPPSATTEYRTT 446
+S ++T+T T SP + T T T +T T P TT TT
Sbjct: 1749 LSTLKTTSTSTSTTKYIPPPHSPPTTTTTTTTTPETTAPRTTTPETTTPETTTPRTTT 1806
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 30.7 bits (66), Expect = 0.76
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Frame = +3
Query: 147 HSRRGPS--SLQCRLLETITR*TTMEVLHSVTRLRMGPSRRRPEVPTVSYAESTATLIPT 320
HS+ PS SL T+T T + + + + ++PT+S ++TAT T
Sbjct: 88 HSKPSPSRPSLNIAPSSTLTPSTAGHTIDIRSTDHVHSRAQEEQIPTLSTLKTTATSTST 147
Query: 321 ATNGSSPTS-LVTLATLTSQTKRMSPKLQHLTPPSATTEYRTT 446
P S T T T +T T P TT TT
Sbjct: 148 TKYIPPPPSPPTTTTTTTPETTAPRTTTPETTTPETTTPRTTT 190
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Frame = +3
Query: 252 PSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATL--TSQTKRMSPKLQHLTPPSA 425
PS++ P T + T T P T + PT+ AT T T P T P+
Sbjct: 35 PSQQLPHNRTTTPTTPTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTT 94
Query: 426 TTEYRTT 446
TT TT
Sbjct: 95 TTPPATT 101
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 252 PSRRRPEVPTVSYAESTATLI-PTATNGSSPTSLVTLATLTSQTKRMSPKLQHLTPPSAT 428
P+ P PT + +T T PT T + T+ T T T K TPP+ T
Sbjct: 56 PATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATT 115
Query: 429 TEYRTT 446
T + T
Sbjct: 116 TPTKPT 121
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 252 PSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMSP-KLQHLTPPSAT 428
P+ P PT + +T T T T+ T T T+ +P K TPP+ T
Sbjct: 84 PATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATT 143
Query: 429 TEYRTT 446
T + T
Sbjct: 144 TPTKPT 149
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 252 PSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMSP-KLQHLTPPSAT 428
P+ P PT + T T T T+ T T T+ +P K TPP+ T
Sbjct: 112 PATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATT 171
Query: 429 TEYRTT 446
T ++T
Sbjct: 172 TPTKST 177
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +3
Query: 252 PSRRRPEVPTVSYAESTAT-LIPTATNGSSPTSLVTLATLTSQTKRMSPKLQHLTPPSAT 428
P+ P PT + +T T PT T + T+ T T K TPP T
Sbjct: 70 PATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTT 129
Query: 429 TEYRTT 446
T + T
Sbjct: 130 TPTKPT 135
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 252 PSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMSP-KLQHLTPPSAT 428
P+ P PT + +T T T T+ T T T+ +P K TPP+ T
Sbjct: 98 PATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATT 157
Query: 429 TEYRTT 446
T + T
Sbjct: 158 TPTKPT 163
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +3
Query: 252 PSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMSP-KLQHLTPPSAT 428
P P PT + +T T T T+ T T T+ +P K TPP+ T
Sbjct: 126 PGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATT 185
Query: 429 T 431
T
Sbjct: 186 T 186
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 264 RPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMSPK 398
+ E P+ + L T ++P ++ TL+++TSQTK+ +P+
Sbjct: 3934 KEEFPSKPSTSLSTDLADTLELNTTPATVDTLSSITSQTKKKTPQ 3978
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 29.1 bits (62), Expect = 2.3
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +3
Query: 141 PNHSRRGPSSLQCRLLETITR*TTMEVLHSVTRLRMGPSRRRPEVPTVSYAESTATLIPT 320
P R+ PSS+ ++ M VT ++MG + +RP P +S S+ P
Sbjct: 1179 PQGDRQLPSSMSAAANSSMWPQDAMRFARPVTSMQMGMATQRP--PDMSGVSSSQRNDPL 1236
Query: 321 ATNGSSPTSLVTLATLTSQTKRMS 392
A++ +P A SQTK+M+
Sbjct: 1237 ASHHVNPE-----ARPVSQTKKMA 1255
>SB_25059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 246 MGPSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMSPKLQHLTPPSA 425
M PS + PT + S L+P + P + T T+ S TK + +L H PP++
Sbjct: 175 MRPSSPNSQAPTTTSPTSPTPLLPPSAPPIQPVACPTSPTIASPTK-LKRELPH--PPAS 231
Query: 426 TTEYR 440
+ R
Sbjct: 232 PRKGR 236
>SB_17889| Best HMM Match : Patched (HMM E-Value=0.14)
Length = 925
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 93 YSSSWRSFCLYMESYWSAGTSWYTCPSCR 7
YS R F Y + W GT+WY+ R
Sbjct: 528 YSKLTRRFSSYQVAVWGKGTNWYSIKQLR 556
>SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1054
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 224 TFGYEAADGSFKEETRG-TDCVVR-GKYGYIDPDGNKREFTYV 346
+ G+ +DG + + ++ TD ++R + + DP GNKRE ++
Sbjct: 834 SMGWARSDGEYYQFSKSFTDDILRIDSHSFEDPQGNKREGVFI 876
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +3
Query: 252 PSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMSPKLQHLTPPSATT 431
P P T ++ T PT T ++PT+ T AT ++QT + ATT
Sbjct: 384 PPTTTPSKATAPISDPMTTTTPTTTKATTPTT--TKATASTQTAAEANTFLSTQKTDATT 441
Query: 432 EYRTT 446
T+
Sbjct: 442 SQSTS 446
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 RRRPEVPTVSYAESTATLIPTAT-NGSSPTSLVTLATLTSQTKRMSPKLQHLTPPSATTE 434
+ R E T + T IPT T + + P ++ T T+ P T + TT+
Sbjct: 1419 KTREEATTKPTTTTRKTTIPTTTASETKPPTIRKTTTATTTVPATKPPTTRKTTTATTTQ 1478
Query: 435 YRTT 446
RTT
Sbjct: 1479 GRTT 1482
>SB_39625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 902
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -2
Query: 349 RDVGELPFVAVGINVAVLSAYDTVGTSGLLLEGPIRSLVTECKTSIVVHLVIVSN 185
R VGE PF VG++ A Y SG +G L+ C + VHL ++ N
Sbjct: 634 RTVGERPFQVVGLDYAGPLPY----KSGNSSDGKAYILLITCSLTRAVHLEVLPN 684
>SB_25197| Best HMM Match : TatC (HMM E-Value=1.8)
Length = 622
Score = 28.7 bits (61), Expect = 3.1
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Frame = +3
Query: 183 LLETITR*TTMEVLHSVTRLRMGPSRRRPEVPTVSYAESTATLIP----TATNGSSPTSL 350
L+++IT T+ V ++ R R S +VSY +T T P TAT SP+S+
Sbjct: 121 LVQSITAPTSPNV--TINRTREANSTMILSSTSVSY-NTTLTPAPDAASTATTAISPSSV 177
Query: 351 VTLATLTSQTKRMSPKLQHLTPPSATT---EYRTT 446
+ TL S L PS +T Y TT
Sbjct: 178 GNMTTLVSSVNLTRSSLSTTLIPSISTSILSYNTT 212
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -2
Query: 349 RDVGELPFVAVGINVAVLSAYDTVGTSGLLLEGPIRSLVTECKTSIVVHLVIVSN 185
R VGE PF VG++ A Y SG +G L+ C + VHL ++ N
Sbjct: 62 RTVGERPFQVVGLDYAGPLPY----KSGNSSDGKAYILLITCSLTRAVHLEVLPN 112
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 276 PTVSYAES-TATLIPTATNGSSPTSLVTLATLTSQTKRMSPKLQHLTPPS 422
PT + + TAT+ PTA+N + T+ VT T + + + +TP S
Sbjct: 434 PTATLTSAPTATVTPTASNAFTETTTVTSTTTITVLPQPTSASSSITPSS 483
>SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84)
Length = 244
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 252 PSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMSPKLQHLTPPSATT 431
P+ VPT + + T +PT + PT++ T T+ T L+ PP+ T
Sbjct: 162 PTTESTAVPTTA-PTTEPTTVPTTIPTTIPTTVPTTEPTTAPTTPEPTTLEPTDPPT-TG 219
Query: 432 EYR 440
EYR
Sbjct: 220 EYR 222
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 297 STATLIPTATNGSSPTSLVTLATLTSQTKRMSPKLQHLTPPSA 425
S+ +I T T+G +PTS +++ TLT+ + + L P SA
Sbjct: 531 SSLIIIDTTTSGITPTSTISVTTLTTTRTHTTTSIT-LHPSSA 572
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 105 GLCSYSSSWRSFCLYMESYWSAG 37
GLCS S +R FC+YME+ + G
Sbjct: 643 GLCS--SCYRRFCIYMETTYGGG 663
>SB_52131| Best HMM Match : AIRS_C (HMM E-Value=1.69978e-42)
Length = 1371
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 343 VGELPFVAVGINVAVLSAYDTVGTSGLLLEGPIRSLV 233
VG L G+ V LS + TVG++ + E PI+ LV
Sbjct: 718 VGPLHTPVAGVAVTALSHFHTVGSATAVGEQPIKCLV 754
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 27.9 bits (59), Expect = 5.4
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 13/115 (11%)
Frame = +3
Query: 123 PGRSFSPNHSRRGPSSLQCRLLETITR*TTMEVLHSVTRLRMG--PSRRRPEVPTVSYAE 296
PG + + +S + R L+ + + + + H V LR P + EVP +
Sbjct: 979 PGADETGGFQEKFENSSKKRFLKCVGKTSRIAATHPVDELRASKKPRLAKVEVPCNKETD 1038
Query: 297 STA----TLIPT-------ATNGSSPTSLVTLATLTSQTKRMSPKLQHLTPPSAT 428
TL T T+GS +L LA S T +PK + PPS T
Sbjct: 1039 LDERVNDTLTSTDGQLSLRGTSGSVTNTLEDLAASISSTASCNPKDSSMIPPSGT 1093
>SB_42063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 321 ATNGSSPTSLVTLATLTSQTKRMSPKLQHLTPPS 422
AT S + TLAT+ S+ K M P + T P+
Sbjct: 33 ATKASPGPEVATLATVVSKVKAMKPNTLNTTNPA 66
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +3
Query: 276 PTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMSPKLQHLTPPSAT 428
PT + + T P++T +SP VT+ T+ + ++P P++T
Sbjct: 773 PTATTTSTLQTTEPSSTPSTSPALTVTMTTVIATDSSITPTTVTKVIPTST 823
>SB_49822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 750
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 227 FGYEAADGSFKEETRGTDCVVRGKYGYIDPDGNKREFTYVSG 352
FGY + S ++ + V ++GYI ++R+F Y+SG
Sbjct: 137 FGYTSGIASERQFGYISGIVSERQFGYISGIASERQFGYISG 178
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +3
Query: 267 PEVPTVSYA----ESTATLIPTATNGSSPTSLVTLATLTSQTKRMSPKLQHLTPPSATT 431
PE T S A E+T + T ++ SLVT A T+ ++ + T P ATT
Sbjct: 232 PETTTASLATTAPEATTASLATTAPEATTASLVTTAPETTTASLVTTAPEATTAPEATT 290
>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 27.5 bits (58), Expect = 7.1
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Frame = +3
Query: 27 TSSFRLTNTTPYIDRMTAKMKSMSRDQFSGCHPGRSFSPNHSRRGPSSLQCRLLETITR* 206
TS+ TNT D +TA S++ + H S S + + +T T
Sbjct: 598 TSTGVTTNTYTKTDTLTAISTSITTLVTTSIHLATSTQLLTSTKTETKTNT---DTSTAT 654
Query: 207 TTMEVLHSVTRLRMGPSRRRPEVPTVSYAE-STATLIPTATNGSSPTSLVTLATLTSQTK 383
TT H T ++ + R V T+S +TAT+ T T T+L T T+T++T
Sbjct: 655 TTTTHTHHTTETQVS-TVRTTTVDTLSSTHVTTATITATKTQ----TTLATSTTVTTETD 709
Query: 384 RMSPKLQHLTPPSATTEYRTT 446
+ K+ +T T+ T+
Sbjct: 710 TQT-KMHVMTSVETRTDKVTS 729
>SB_28082| Best HMM Match : A2M_comp (HMM E-Value=0)
Length = 1013
Score = 27.1 bits (57), Expect = 9.4
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +3
Query: 78 AKMKSMSRDQFSGCHPGRSFSPNHSRRGPSSLQCRLLETITR*TTMEVLHSVTRLRMGPS 257
+ M M FSG P R H+ GP + + T + TR M S
Sbjct: 812 SNMAVMELGVFSGFTPDRESVAKHAYNGPRGRSQPMAARVQYATRSLSANGSTRTIMLRS 871
Query: 258 RRRPEVPTVSYAESTATLIPTATNGSSPT 344
R +P V YA + + NGS+ T
Sbjct: 872 RSQPMAARVQYASRS-----LSANGSTRT 895
>SB_11623| Best HMM Match : ABC1 (HMM E-Value=0)
Length = 780
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 183 VCTGGCLGPSCCGWG*SFCRD 121
VC G + SCCG +FCR+
Sbjct: 258 VCLRGAVVASCCGVSLAFCRE 278
>SB_53747| Best HMM Match : S1-P1_nuclease (HMM E-Value=2.9)
Length = 554
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/69 (28%), Positives = 25/69 (36%)
Frame = +3
Query: 225 HSVTRLRMGPSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMSPKLQ 404
H VT + E V+ A +TAT T TN + S T T + S
Sbjct: 465 HDVTSASTTTTTTSTETNEVTSASTTATTTSTKTNEVTSASTTATTTSTKTNEFTSASTA 524
Query: 405 HLTPPSATT 431
T SA T
Sbjct: 525 LTTTSSAKT 533
>SB_32235| Best HMM Match : Peptidase_A17 (HMM E-Value=4.2e-08)
Length = 525
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -2
Query: 349 RDVGELPFVAVGINVAVLSAYDTVGTSGLLLEGPIRSLVTECKTSIVVHLVIVSN 185
R VGE PF VG++ A Y SG +G L+ C VHL ++ N
Sbjct: 271 RIVGERPFQVVGLDYAGPLPY----KSGNSSDGKAYILLITCSLPRAVHLEVLPN 321
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +3
Query: 192 TITR*TTMEVLHSVTRLRMGPSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLT 371
T+T T V + T + + + +TAT+ TAT ++ T+ VT AT
Sbjct: 165 TVTATATATVTAAATATATATATATATTTSTATVTATATVTVTATAATTVTATVTAATTV 224
Query: 372 SQT 380
+ T
Sbjct: 225 TVT 227
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,226,397
Number of Sequences: 59808
Number of extensions: 296496
Number of successful extensions: 1201
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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