Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305B10f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 256 5e-68
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 256 5e-68
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 256 5e-68
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 256 5e-68
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 256 5e-68
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 256 5e-68
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 256 5e-68
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 256 5e-68
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 256 5e-68
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 66 9e-11
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 34 0.35
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 33 0.61
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 33 0.61
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 33 0.61
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 30 4.3
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 256 bits (626), Expect = 5e-68
Identities = 115/141 (81%), Positives = 127/141 (90%)
Frame = -1
Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
NV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+
Sbjct: 100 NVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHI
Sbjct: 160 SANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHI 219
Query: 161 GKASTVKRGTSAGRKVGLIAA 99
GK ST++R AGRKVGLIAA
Sbjct: 220 GKPSTIRRDAPAGRKVGLIAA 240
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 256 bits (626), Expect = 5e-68
Identities = 115/141 (81%), Positives = 127/141 (90%)
Frame = -1
Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
NV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+
Sbjct: 100 NVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHI
Sbjct: 160 SANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHI 219
Query: 161 GKASTVKRGTSAGRKVGLIAA 99
GK ST++R AGRKVGLIAA
Sbjct: 220 GKPSTIRRDAPAGRKVGLIAA 240
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 256 bits (626), Expect = 5e-68
Identities = 115/141 (81%), Positives = 127/141 (90%)
Frame = -1
Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
NV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+
Sbjct: 100 NVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHI
Sbjct: 160 SANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHI 219
Query: 161 GKASTVKRGTSAGRKVGLIAA 99
GK ST++R AGRKVGLIAA
Sbjct: 220 GKPSTIRRDAPAGRKVGLIAA 240
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 256 bits (626), Expect = 5e-68
Identities = 115/141 (81%), Positives = 127/141 (90%)
Frame = -1
Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
NV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+
Sbjct: 100 NVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHI
Sbjct: 160 SANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHI 219
Query: 161 GKASTVKRGTSAGRKVGLIAA 99
GK ST++R AGRKVGLIAA
Sbjct: 220 GKPSTIRRDAPAGRKVGLIAA 240
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 256 bits (626), Expect = 5e-68
Identities = 115/141 (81%), Positives = 127/141 (90%)
Frame = -1
Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
NV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+
Sbjct: 100 NVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHI
Sbjct: 160 SANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHI 219
Query: 161 GKASTVKRGTSAGRKVGLIAA 99
GK ST++R AGRKVGLIAA
Sbjct: 220 GKPSTIRRDAPAGRKVGLIAA 240
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 256 bits (626), Expect = 5e-68
Identities = 115/141 (81%), Positives = 127/141 (90%)
Frame = -1
Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
NV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+
Sbjct: 100 NVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHI
Sbjct: 160 SANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHI 219
Query: 161 GKASTVKRGTSAGRKVGLIAA 99
GK ST++R AGRKVGLIAA
Sbjct: 220 GKPSTIRRDAPAGRKVGLIAA 240
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 256 bits (626), Expect = 5e-68
Identities = 115/141 (81%), Positives = 127/141 (90%)
Frame = -1
Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
NV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+
Sbjct: 100 NVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHI
Sbjct: 160 SANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHI 219
Query: 161 GKASTVKRGTSAGRKVGLIAA 99
GK ST++R AGRKVGLIAA
Sbjct: 220 GKPSTIRRDAPAGRKVGLIAA 240
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 256 bits (626), Expect = 5e-68
Identities = 115/141 (81%), Positives = 127/141 (90%)
Frame = -1
Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
NV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+
Sbjct: 54 NVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 113
Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHI
Sbjct: 114 SANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHI 173
Query: 161 GKASTVKRGTSAGRKVGLIAA 99
GK ST++R AGRKVGLIAA
Sbjct: 174 GKPSTIRRDAPAGRKVGLIAA 194
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 256 bits (626), Expect = 5e-68
Identities = 115/141 (81%), Positives = 127/141 (90%)
Frame = -1
Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
NV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+
Sbjct: 100 NVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHI
Sbjct: 160 SANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHI 219
Query: 161 GKASTVKRGTSAGRKVGLIAA 99
GK ST++R AGRKVGLIAA
Sbjct: 220 GKPSTIRRDAPAGRKVGLIAA 240
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 65.7 bits (153), Expect = 9e-11
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = -1
Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 417
NV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 96 NVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 33.9 bits (74), Expect = 0.35
Identities = 23/82 (28%), Positives = 41/82 (50%)
Frame = -1
Query: 512 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSN 333
P+GA+P GT++ N+E + G + RA+G ++ + ++LPS + + +
Sbjct: 183 PLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGHSIIQLPSKRQMQVLETC 240
Query: 332 RGMVGIVAGGGRIDKPILKAGR 267
VG V+ + I KAGR
Sbjct: 241 VATVGRVSNVDHNKRVIGKAGR 262
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.61
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = -1
Query: 512 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSN 333
P+GA+P GT++ N+E + G + RA+G ++ ++LPS + + +
Sbjct: 183 PLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETC 240
Query: 332 RGMVGIVAGGGRIDKPILKAGR 267
VG V+ + I KAGR
Sbjct: 241 VATVGRVSNVDHNKRVIGKAGR 262
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.61
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = -1
Query: 512 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSN 333
P+GA+P GT++ N+E + G + RA+G ++ ++LPS + + +
Sbjct: 183 PLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETC 240
Query: 332 RGMVGIVAGGGRIDKPILKAGR 267
VG V+ + I KAGR
Sbjct: 241 VATVGRVSNVDHNKRVIGKAGR 262
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 33.1 bits (72), Expect = 0.61
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = -1
Query: 512 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSN 333
P+GA+P GT++ N+E + G + RA+G ++ ++LPS + + +
Sbjct: 180 PLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETC 237
Query: 332 RGMVGIVAGGGRIDKPILKAGR 267
VG V+ + I KAGR
Sbjct: 238 VATVGRVSNVDHNKRVIGKAGR 259
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 238 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPL 333
L LT +L+ A P F++ +S+ PPP ++P P+
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,575,533
Number of Sequences: 237096
Number of extensions: 1940081
Number of successful extensions: 4675
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4674
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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