Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305B10f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p pro...   272   2e-73
AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p pro...   272   2e-73
AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal pr...   272   2e-73
AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,...   272   2e-73
AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,...   272   2e-73
BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p pro...   249   2e-66
U47849-1|AAC47196.2|  829|Drosophila melanogaster Lozenge protein.     34   0.13 
DQ397338-1|ABD59005.1|  705|Drosophila melanogaster Lozenge spli...    34   0.13 
AF217651-2|AAF35308.1|  826|Drosophila melanogaster lozenge prot...    34   0.13 
AE014298-1325|AAF46486.2|  826|Drosophila melanogaster CG1689-PA...    34   0.13 
AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p pro...    33   0.31 
AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA...    33   0.31 
AY070942-1|AAL48564.1|  286|Drosophila melanogaster RE03883p pro...    29   5.1  
AE013599-1623|AAF58435.2|  286|Drosophila melanogaster CG13321-P...    29   5.1  
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P...    28   6.7  
AE014298-1064|AAF46277.1|  667|Drosophila melanogaster CG15326-P...    28   6.7  

>BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p
           protein.
          Length = 256

 Score =  272 bits (667), Expect = 2e-73
 Identities = 125/141 (88%), Positives = 131/141 (92%)
 Frame = -1

Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
           NVMP+  MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+P
Sbjct: 100 NVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVP 159

Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
           S+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHI
Sbjct: 160 SANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHI 219

Query: 161 GKASTVKRGTSAGRKVGLIAA 99
           GKASTVKRGTSAGRKVGLIAA
Sbjct: 220 GKASTVKRGTSAGRKVGLIAA 240


>AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p
           protein.
          Length = 256

 Score =  272 bits (667), Expect = 2e-73
 Identities = 125/141 (88%), Positives = 131/141 (92%)
 Frame = -1

Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
           NVMP+  MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+P
Sbjct: 100 NVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVP 159

Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
           S+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHI
Sbjct: 160 SANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHI 219

Query: 161 GKASTVKRGTSAGRKVGLIAA 99
           GKASTVKRGTSAGRKVGLIAA
Sbjct: 220 GKASTVKRGTSAGRKVGLIAA 240


>AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal
           protein L8 protein.
          Length = 256

 Score =  272 bits (667), Expect = 2e-73
 Identities = 125/141 (88%), Positives = 131/141 (92%)
 Frame = -1

Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
           NVMP+  MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+P
Sbjct: 100 NVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVP 159

Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
           S+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHI
Sbjct: 160 SANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHI 219

Query: 161 GKASTVKRGTSAGRKVGLIAA 99
           GKASTVKRGTSAGRKVGLIAA
Sbjct: 220 GKASTVKRGTSAGRKVGLIAA 240


>AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,
           isoform B protein.
          Length = 256

 Score =  272 bits (667), Expect = 2e-73
 Identities = 125/141 (88%), Positives = 131/141 (92%)
 Frame = -1

Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
           NVMP+  MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+P
Sbjct: 100 NVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVP 159

Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
           S+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHI
Sbjct: 160 SANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHI 219

Query: 161 GKASTVKRGTSAGRKVGLIAA 99
           GKASTVKRGTSAGRKVGLIAA
Sbjct: 220 GKASTVKRGTSAGRKVGLIAA 240


>AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,
           isoform A protein.
          Length = 256

 Score =  272 bits (667), Expect = 2e-73
 Identities = 125/141 (88%), Positives = 131/141 (92%)
 Frame = -1

Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
           NVMP+  MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+P
Sbjct: 100 NVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVP 159

Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
           S+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHI
Sbjct: 160 SANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHI 219

Query: 161 GKASTVKRGTSAGRKVGLIAA 99
           GKASTVKRGTSAGRKVGLIAA
Sbjct: 220 GKASTVKRGTSAGRKVGLIAA 240


>BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p
           protein.
          Length = 579

 Score =  249 bits (609), Expect = 2e-66
 Identities = 113/130 (86%), Positives = 119/130 (91%)
 Frame = -1

Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
           NVMP+  MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+P
Sbjct: 55  NVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVP 114

Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
           S+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHI
Sbjct: 115 SANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHI 174

Query: 161 GKASTVKRGT 132
           GKASTVKR T
Sbjct: 175 GKASTVKRRT 184


>U47849-1|AAC47196.2|  829|Drosophila melanogaster Lozenge protein.
          Length = 829

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 314 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 165
           VAG GR+ + I  +G ++H + +  +  PY      +P  HPH   +H H
Sbjct: 90  VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138


>DQ397338-1|ABD59005.1|  705|Drosophila melanogaster Lozenge splice
           variant protein.
          Length = 705

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 314 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 165
           VAG GR+ + I  +G ++H + +  +  PY      +P  HPH   +H H
Sbjct: 90  VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138


>AF217651-2|AAF35308.1|  826|Drosophila melanogaster lozenge
           protein.
          Length = 826

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 314 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 165
           VAG GR+ + I  +G ++H + +  +  PY      +P  HPH   +H H
Sbjct: 90  VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138


>AE014298-1325|AAF46486.2|  826|Drosophila melanogaster CG1689-PA
           protein.
          Length = 826

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 314 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 165
           VAG GR+ + I  +G ++H + +  +  PY      +P  HPH   +H H
Sbjct: 90  VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138


>AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p
           protein.
          Length = 294

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -1

Query: 512 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 363
           P+GA+P GT +  LE+  G    L  A+G F T++      ++  V+LPS
Sbjct: 165 PLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212


>AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA
           protein.
          Length = 294

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -1

Query: 512 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 363
           P+GA+P GT +  LE+  G    L  A+G F T++      ++  V+LPS
Sbjct: 165 PLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212


>AY070942-1|AAL48564.1|  286|Drosophila melanogaster RE03883p
           protein.
          Length = 286

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 347 LPSSNRGMV-GIVAGGGRIDKPILKAGRAYHK 255
           + SS RG+V G V GG   D   +  GRAYH+
Sbjct: 149 IASSGRGIVPGTVVGGHDADGDQIYVGRAYHE 180


>AE013599-1623|AAF58435.2|  286|Drosophila melanogaster CG13321-PA
           protein.
          Length = 286

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 347 LPSSNRGMV-GIVAGGGRIDKPILKAGRAYHK 255
           + SS RG+V G V GG   D   +  GRAYH+
Sbjct: 149 IASSGRGIVPGTVVGGHDADGDQIYVGRAYHE 180


>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
            protein.
          Length = 1161

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 242  RNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 123
            ++ WP +     N  E P GGG  + +G A T  RGT  G
Sbjct: 1049 QSSWPRLE--TGNTTEKPAGGGTTE-VGAAGTAGRGTGGG 1085


>AE014298-1064|AAF46277.1|  667|Drosophila melanogaster CG15326-PA
           protein.
          Length = 667

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 205 FMATPR-TYGQQLRLTLYLWYALPAFKIGLSIRPP 306
           +M+ P   YG++++ TL   + L    +G+ +RPP
Sbjct: 107 YMSMPTDAYGEEMQATLRFLWRLSVLNVGVVLRPP 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,510,317
Number of Sequences: 53049
Number of extensions: 588160
Number of successful extensions: 2066
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2065
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)