Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305B10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...   244   3e-65
AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical ...    34   0.054
Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z81586-6|CAB04697.2|  393|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U64859-9|AAC69090.1|  378|Caenorhabditis elegans Activated in bl...    28   4.7  
U64859-8|AAC69096.1|  378|Caenorhabditis elegans Prion-like-(q/n...    28   4.7  
U49830-16|AAK31480.1|  392|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr...    27   6.2  
L11247-6|AAA28005.2|  367|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF220526-1|AAF43009.1|  332|Caenorhabditis elegans DNAse II homo...    27   8.1  

>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score =  244 bits (597), Expect = 3e-65
 Identities = 106/141 (75%), Positives = 123/141 (87%)
 Frame = -1

Query: 521 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 342
           N++PVG +PEGT +CN+E K GDRG +ARASGN+ATVI HNPD K+TR++LPSGAKKV+ 
Sbjct: 100 NIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQ 159

Query: 341 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 162
           S NR M+G+VAGGGR DKP+LKAGR+YHKYK KRN WP VRGVAMNPVEHPHGGGNHQHI
Sbjct: 160 SVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHI 219

Query: 161 GKASTVKRGTSAGRKVGLIAA 99
           G  STV+R  SAG+KVGLIAA
Sbjct: 220 GHPSTVRRDASAGKKVGLIAA 240


>AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical
           protein F56B3.8 protein.
          Length = 321

 Score = 34.3 bits (75), Expect = 0.054
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
 Frame = -1

Query: 521 NVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 345
           N  P+G++  GT++ ++E     D     +A+G  AT++ H  D   T VKLP   +  L
Sbjct: 161 NAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFSL 218

Query: 344 PSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVK 243
             +    VG ++    ID  I  + + + ++  K
Sbjct: 219 HRTCMATVGRLSHAD-IDGKIFGSAQMHRRFGYK 251


>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -1

Query: 410 IGHNPDAKRTRVKLPSGAKKVL 345
           IGH  D +RTR  LP+G KKVL
Sbjct: 57  IGHGSD-RRTRFVLPNGYKKVL 77


>Z81586-6|CAB04697.2|  393|Caenorhabditis elegans Hypothetical
           protein T05F1.8 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +1

Query: 244 LTLYLWYALPAFKIGLSI-RPPPATIP---TMPLLLDGRTFLAP 363
           LT   W+   +FK+ +++ RPPP  +P      L + G T +AP
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPQMPESLKKKLGIPGTTEVAP 352


>U64859-9|AAC69090.1|  378|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 9 protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 22/76 (28%), Positives = 27/76 (35%)
 Frame = +2

Query: 251 CTCGMPFQLSK*VCQYVHLQQQYRPCLCCLMAEPSWLQTVALLLYA*HQDCVQSQWRSFQ 430
           C+C    Q     CQ   +QQQ   C C   A+P   QTV +        C QS  +  Q
Sbjct: 37  CSCQQVQQTQSCSCQSAPVQQQAPSCSC---AQPQQTQTVQVQSTQCAPACQQSCRQQCQ 93

Query: 431 RHVPDDLYHPFSLQDC 478
                    P   Q C
Sbjct: 94  SAPAVSQCQPMCQQQC 109


>U64859-8|AAC69096.1|  378|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 57
           protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 22/76 (28%), Positives = 27/76 (35%)
 Frame = +2

Query: 251 CTCGMPFQLSK*VCQYVHLQQQYRPCLCCLMAEPSWLQTVALLLYA*HQDCVQSQWRSFQ 430
           C+C    Q     CQ   +QQQ   C C   A+P   QTV +        C QS  +  Q
Sbjct: 37  CSCQQVQQTQSCSCQSAPVQQQAPSCSC---AQPQQTQTVQVQSTQCAPACQQSCRQQCQ 93

Query: 431 RHVPDDLYHPFSLQDC 478
                    P   Q C
Sbjct: 94  SAPAVSQCQPMCQQQC 109


>U49830-16|AAK31480.1|  392|Caenorhabditis elegans Hypothetical
           protein C33F10.12 protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +1

Query: 244 LTLYLWYALPAFKIGLSI-RPPPATIP---TMPLLLDGRTFLAP 363
           LT   W+   +FK+ +++ RPPP  +P      L + G T +AP
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPRMPESLKKKLGIPGTTEVAP 352


>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
           protein H05G16.1 protein.
          Length = 1111

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -1

Query: 263 YHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTS 129
           Y+K++   +  P++  ++  P +H   G     +GK+ T    TS
Sbjct: 414 YNKHQNTHSSMPHIAHISSQPADHSFSGTLDARVGKSVTRDPSTS 458


>L11247-6|AAA28005.2|  367|Caenorhabditis elegans Hypothetical
           protein F09G8.2 protein.
          Length = 367

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 342 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHH 518
           W +L+  +      TL++    N SG+    TC +TS TH + ++   G L  +S++ H
Sbjct: 234 WNDLISRQN---KVTLAVESWLNGSGDDIHTTCTSTSQTHDVTEMRVTG-LNFASSKDH 288


>AF220526-1|AAF43009.1|  332|Caenorhabditis elegans DNAse II homolog
           F09G8.2 protein.
          Length = 332

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 342 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHH 518
           W +L+  +      TL++    N SG+    TC +TS TH + ++   G L  +S++ H
Sbjct: 209 WNDLISRQN---KVTLAVESWLNGSGDDIHTTCTSTSQTHDVTEMRVTG-LNFASSKDH 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,654,787
Number of Sequences: 27780
Number of extensions: 276217
Number of successful extensions: 742
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)