Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305B09f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.6  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   8.2  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   8.2  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 59  RFWYRSCSGNGTGRNVCKLTV 121
           R+++R+C+GN  G    KL+V
Sbjct: 666 RYFFRACAGNVKGWGPYKLSV 686


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 222 LVVAPGRQLEVVVQERGPVPE 160
           L+++   QL VVV E  P PE
Sbjct: 11  LLISLSAQLHVVVGEEAPKPE 31


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 467 MSCRNCYSNVRLLRGIR 417
           M+CR  Y  +++LRG R
Sbjct: 32  MACRQKYGPLKILRGAR 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,643
Number of Sequences: 2352
Number of extensions: 6500
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)