Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305B08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    23   2.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   5.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   6.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.7  

>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 447 LDLSPCPPGGRGADLRLPELFVSFPS*C 364
           L+  PC P GR     LP+  V+  S C
Sbjct: 61  LEKGPCSPEGRELKKILPDALVTNCSKC 88


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 319 RFC*RYSACVRDVTVTLAR 375
           +FC RYSA  +D+   L +
Sbjct: 547 KFCARYSAATQDLNKLLRK 565


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 193 ILFF*YTYIYFVFRDTLVYLI 131
           +L F   Y++FV  + ++YLI
Sbjct: 138 VLVFVPDYVFFVENEPILYLI 158


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 449 PSTCPPAPP 423
           PST PP PP
Sbjct: 210 PSTIPPPPP 218


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = -3

Query: 447 LDLSPCPPGGRGADLRLPELFVSFPS*CHGDVTDTSRVPSTKTTRTRRMQFSK 289
           L   PCPP G      LPE   +  + C    T+  R  + ++ +  + ++ K
Sbjct: 48  LSKGPCPPQGVDLKRVLPEALQTNCAKC----TEKQRTAAYRSIKRLKKEYPK 96


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 140 Y*CVSKNEIYICILKKKYFCLYNEHETTICDY 235
           Y CVS     + I +K    L  + E  IC+Y
Sbjct: 459 YTCVSDGSKLVSIQRKCNHGLVYDLELNICNY 490


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 74  RTYIL*RLKLSTTLHRYCS 130
           R Y     K++T L RYCS
Sbjct: 60  RKYSTPLAKITTILQRYCS 78


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 74  RTYIL*RLKLSTTLHRYCS 130
           R Y     K++T L RYCS
Sbjct: 56  RKYSTPLAKITTILQRYCS 74


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/46 (19%), Positives = 21/46 (45%)
 Frame = +2

Query: 155 KNEIYICILKKKYFCLYNEHETTICDYLCLISYFVNQQNLLIAKFF 292
           K+ +   IL +  F ++  +   +C  +    YF  +  L+I  ++
Sbjct: 176 KSSLVQLILTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYY 221


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/46 (19%), Positives = 21/46 (45%)
 Frame = +2

Query: 155 KNEIYICILKKKYFCLYNEHETTICDYLCLISYFVNQQNLLIAKFF 292
           K+ +   IL +  F ++  +   +C  +    YF  +  L+I  ++
Sbjct: 102 KSSLVQLILTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYY 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,349
Number of Sequences: 336
Number of extensions: 2901
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)