Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305B08f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         26   0.051
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.2  
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    23   8.2  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    23   8.2  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 26.2 bits (55), Expect(2) = 0.051
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -1

Query: 449 PSTCPPAPPGGGGQTSGCRNYLYLFRASVTVTSRTQ 342
           P+  PP+PP   G+++    ++  F A+    +  Q
Sbjct: 300 PAAAPPSPPTSAGESNHYYGHIRAFAAAAVAAAAVQ 335



 Score = 22.2 bits (45), Expect(2) = 0.051
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 467 CETTARPSTCPPAPP 423
           C ++A  S CP +PP
Sbjct: 249 CSSSAAGSLCPTSPP 263


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 453 PPLDLSPCPPGGRGADLRLPELFVSFP 373
           P    SP  P G G+  R  + FV FP
Sbjct: 371 PKTPTSPTGPSGPGSGHRSHDSFVLFP 397


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 447 LDLSPCPPGGRGADLRLPE 391
           L   PCPP G+     LPE
Sbjct: 55  LSRKPCPPEGKDLKRILPE 73


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 447 LDLSPCPPGGRGADLRLPE 391
           L   PCPP G+     LPE
Sbjct: 55  LSRKPCPPEGKDLKRILPE 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,857
Number of Sequences: 2352
Number of extensions: 10635
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)