Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305B08f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4 p...    25   2.6  
AJ238707-1|CAB42051.1|  462|Drosophila melanogaster MSTA protein...    25   2.8  
AE014298-362|AAN09072.1|  462|Drosophila melanogaster CG33548-PA...    25   2.8  
AY071035-1|AAL48657.1|  233|Drosophila melanogaster RE11961p pro...    29   3.8  
AY070835-1|AAL48457.1|  233|Drosophila melanogaster GH06691p pro...    29   3.8  
AE014297-2748|AAF55732.2|  386|Drosophila melanogaster CG4433-PA...    29   3.8  
AE014297-2747|AAS65179.1|  365|Drosophila melanogaster CG4433-PB...    29   3.8  
AE014296-1844|AAF50139.1|  233|Drosophila melanogaster CG11811-P...    29   3.8  
AY060288-1|AAL25327.1|  701|Drosophila melanogaster GH13047p pro...    28   6.7  
AE014296-2593|AAF49569.3|  861|Drosophila melanogaster CG6114-PA...    28   6.7  
BT001527-1|AAN71282.1|  424|Drosophila melanogaster RE04485p pro...    28   8.8  
AY119067-1|AAM50927.1|  217|Drosophila melanogaster LP08165p pro...    28   8.8  
AE013599-2517|AAS64816.1|  424|Drosophila melanogaster CG6477-PB...    28   8.8  

>AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4
           protein.
          Length = 991

 Score = 24.6 bits (51), Expect(2) = 2.6
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 440 CPPAPPGGGG 411
           CPP  PGGGG
Sbjct: 536 CPPPRPGGGG 545



 Score = 23.4 bits (48), Expect(2) = 2.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 437 PPAPPGGGGQTS 402
           PP P GGGG T+
Sbjct: 538 PPRPGGGGGDTT 549


>AJ238707-1|CAB42051.1|  462|Drosophila melanogaster MSTA protein
           protein.
          Length = 462

 Score = 24.6 bits (51), Expect(2) = 2.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 440 CPPAPPGGGG 411
           CPP  PGGGG
Sbjct: 7   CPPPRPGGGG 16



 Score = 23.4 bits (48), Expect(2) = 2.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 437 PPAPPGGGGQTS 402
           PP P GGGG T+
Sbjct: 9   PPRPGGGGGDTT 20


>AE014298-362|AAN09072.1|  462|Drosophila melanogaster CG33548-PA,
           isoform A protein.
          Length = 462

 Score = 24.6 bits (51), Expect(2) = 2.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 440 CPPAPPGGGG 411
           CPP  PGGGG
Sbjct: 7   CPPPRPGGGG 16



 Score = 23.4 bits (48), Expect(2) = 2.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 437 PPAPPGGGGQTS 402
           PP P GGGG T+
Sbjct: 9   PPRPGGGGGDTT 20


>AY071035-1|AAL48657.1|  233|Drosophila melanogaster RE11961p
           protein.
          Length = 233

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -3

Query: 450 PLDLSPCPPGGRGADLRLPELFVSFPS*CHGDVTDTSRVP 331
           P  L  C P G G    L  LF  FPS     ++ T+R P
Sbjct: 35  PRPLVLCGPSGSGKSTLLKRLFAEFPSTFGFSISHTTRKP 74


>AY070835-1|AAL48457.1|  233|Drosophila melanogaster GH06691p
           protein.
          Length = 233

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -3

Query: 450 PLDLSPCPPGGRGADLRLPELFVSFPS*CHGDVTDTSRVP 331
           P  L  C P G G    L  LF  FPS     ++ T+R P
Sbjct: 35  PRPLVLCGPSGSGKSTLLKRLFAEFPSTFGFSISHTTRKP 74


>AE014297-2748|AAF55732.2|  386|Drosophila melanogaster CG4433-PA,
           isoform A protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 365 H*LGKDTNSSGNRRSAPRPPGGQGDRSRGGL 457
           H  G DT+++G+   A   P   G+RS GGL
Sbjct: 88  HHNGNDTSNAGSGEGAELNPSSDGNRSPGGL 118


>AE014297-2747|AAS65179.1|  365|Drosophila melanogaster CG4433-PB,
           isoform B protein.
          Length = 365

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 365 H*LGKDTNSSGNRRSAPRPPGGQGDRSRGGL 457
           H  G DT+++G+   A   P   G+RS GGL
Sbjct: 88  HHNGNDTSNAGSGEGAELNPSSDGNRSPGGL 118


>AE014296-1844|AAF50139.1|  233|Drosophila melanogaster CG11811-PA
           protein.
          Length = 233

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -3

Query: 450 PLDLSPCPPGGRGADLRLPELFVSFPS*CHGDVTDTSRVP 331
           P  L  C P G G    L  LF  FPS     ++ T+R P
Sbjct: 35  PRPLVLCGPSGSGKSTLLKRLFAEFPSTFGFSISHTTRKP 74


>AY060288-1|AAL25327.1|  701|Drosophila melanogaster GH13047p
           protein.
          Length = 701

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
 Frame = +1

Query: 409 CPPPPGGAGGQVEGRAVVS---HHRANS 483
           C  PPG  GG   G    S   HHRANS
Sbjct: 360 CGIPPGSPGGNSSGSTSASPSVHHRANS 387


>AE014296-2593|AAF49569.3|  861|Drosophila melanogaster CG6114-PA
           protein.
          Length = 861

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
 Frame = +1

Query: 409 CPPPPGGAGGQVEGRAVVS---HHRANS 483
           C  PPG  GG   G    S   HHRANS
Sbjct: 520 CGIPPGSPGGNSSGSTSASPSVHHRANS 547


>BT001527-1|AAN71282.1|  424|Drosophila melanogaster RE04485p
           protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -1

Query: 371 ASVTVTSRTQAEYRQ---QKRLAPEECNSQKILRSTNFAD*QNKILDISNHIL*FHVHCT 201
           A+ T T+ T  E  Q     +  PE    +++++  N  + Q K+L I N ++ FH    
Sbjct: 353 AAATNTNNTDTELAQLYAHIQSMPESSKKRRLIKQFNKQNGQGKLLYIFNALMPFHSGSY 412

Query: 200 NKNT 189
           + NT
Sbjct: 413 DLNT 416


>AY119067-1|AAM50927.1|  217|Drosophila melanogaster LP08165p
           protein.
          Length = 217

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 449 PSTCPPAPPGGGGQTSGCRN 390
           P+  PP PPG G  T  C N
Sbjct: 106 PAPAPPPPPGAGNCTCSCCN 125


>AE013599-2517|AAS64816.1|  424|Drosophila melanogaster CG6477-PB,
           isoform B protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -1

Query: 371 ASVTVTSRTQAEYRQ---QKRLAPEECNSQKILRSTNFAD*QNKILDISNHIL*FHVHCT 201
           A+ T T+ T  E  Q     +  PE    +++++  N  + Q K+L I N ++ FH    
Sbjct: 353 AAATNTNNTDTELAQLYAHIQSMPESSKKRRLIKQFNKQNGQGKLLYIFNALMPFHSGSY 412

Query: 200 NKNT 189
           + NT
Sbjct: 413 DLNT 416


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,367,572
Number of Sequences: 53049
Number of extensions: 499294
Number of successful extensions: 2120
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2113
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)