Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305B08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70682-4|CAA94581.1|  299|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z49910-4|CAA90122.2|  173|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z77132-3|CAB00860.1|  310|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z77132-2|CAB00858.1|  294|Caenorhabditis elegans Hypothetical pr...    28   3.5  
U50312-9|AAA92325.1|  294|Caenorhabditis elegans Collagen protei...    28   3.5  
U50312-8|AAA92324.1|  294|Caenorhabditis elegans Collagen protei...    28   3.5  
U50312-7|AAA92323.2|  306|Caenorhabditis elegans Collagen protei...    28   3.5  
AL023844-1|CAA19526.1|  401|Caenorhabditis elegans Hypothetical ...    28   3.5  
Z66520-8|CAE17837.1|  357|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z49967-4|CAA90250.1|  287|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z46791-2|CAA86756.1|  283|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z68219-2|CAA92476.1|  300|Caenorhabditis elegans Hypothetical pr...    24   9.5  

>Z70682-4|CAA94581.1|  299|Caenorhabditis elegans Hypothetical
           protein F08G5.4 protein.
          Length = 299

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 467 CETTARPSTCPPAPPGGGG 411
           C   A+P+ CPP PPG  G
Sbjct: 85  CNCGAQPNNCPPGPPGPPG 103


>Z49910-4|CAA90122.2|  173|Caenorhabditis elegans Hypothetical
           protein F44G4.6 protein.
          Length = 173

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 507 SFVYLLISRICTVMRNNSPPLDLSPC 430
           +F+Y+L+S IC V   N  PL L  C
Sbjct: 43  AFIYILVSLICCVTTRNYDPLCLRMC 68


>Z77132-3|CAB00860.1|  310|Caenorhabditis elegans Hypothetical
           protein F54D1.3 protein.
          Length = 310

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -1

Query: 467 CETTARPSTCPPAPPGGGGQ 408
           CE T +P TCPP PPG  GQ
Sbjct: 110 CEPT-KP-TCPPGPPGPPGQ 127


>Z77132-2|CAB00858.1|  294|Caenorhabditis elegans Hypothetical
           protein F54D1.2 protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -1

Query: 467 CETTARPSTCPPAPPGGGGQ 408
           CE T +P TCPP PPG  GQ
Sbjct: 94  CEPT-KP-TCPPGPPGPPGQ 111


>U50312-9|AAA92325.1|  294|Caenorhabditis elegans Collagen protein
           10 protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -1

Query: 467 CETTARPSTCPPAPPGGGGQ 408
           CE T +P TCPP PPG  GQ
Sbjct: 94  CEPT-KP-TCPPGPPGPPGQ 111


>U50312-8|AAA92324.1|  294|Caenorhabditis elegans Collagen protein
           145 protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -1

Query: 467 CETTARPSTCPPAPPGGGGQ 408
           CE T +P TCPP PPG  GQ
Sbjct: 94  CEPT-KP-TCPPGPPGPPGQ 111


>U50312-7|AAA92323.2|  306|Caenorhabditis elegans Collagen protein
           144 protein.
          Length = 306

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -1

Query: 467 CETTARPSTCPPAPPGGGGQ 408
           CE T +P TCPP PPG  GQ
Sbjct: 106 CEPT-KP-TCPPGPPGPPGQ 123


>AL023844-1|CAA19526.1|  401|Caenorhabditis elegans Hypothetical
           protein Y48A6B.1 protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
 Frame = +2

Query: 107 TTLHRY-CSY*IY*CVSKNEIYICILKKKYFCLYNEHET----TICDYLCLISYFV 259
           T LHRY C +  +  V  N ++  +L +K   +Y  +      +ICD + + SYF+
Sbjct: 31  TVLHRYLCLFVCFFGVLLNSLHFYVLTRKAMRVYIINALLCAMSICDIITMTSYFI 86


>Z66520-8|CAE17837.1|  357|Caenorhabditis elegans Hypothetical
           protein F49E12.12 protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 191 YFCLYN-EHETTICDYLCLISYFV 259
           Y CLY+ E    IC+Y+C+I+  V
Sbjct: 268 YPCLYHTEWPAAICEYICIITIIV 291


>Z49967-4|CAA90250.1|  287|Caenorhabditis elegans Hypothetical
           protein F54C9.4 protein.
          Length = 287

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
 Frame = -1

Query: 518 EDRIALFIYLFQE----FAR*CETTARPSTCPPAPPGGGGQTSG 399
           E R A F  +F+     +   C   A    CPP PPG  G   G
Sbjct: 67  ESRSAAFASVFRNKRSAYPSQCNCDANSQGCPPGPPGPPGLPGG 110


>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +2

Query: 380 DTNSSGNRRSAPRPPGGQGDRSRGG 454
           D+NS G    AP PPG  G R   G
Sbjct: 87  DSNSQGCPAGAPGPPGNPGKRGDEG 111


>Z46791-2|CAA86756.1|  283|Caenorhabditis elegans Hypothetical
           protein C09G5.3 protein.
          Length = 283

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 467 CETTARPSTCPPAPPGGGGQ 408
           C  +  PS CP  PPG  G+
Sbjct: 82  CNCSEEPSNCPGGPPGPPGE 101


>Z68219-2|CAA92476.1|  300|Caenorhabditis elegans Hypothetical
           protein T05A1.2 protein.
          Length = 300

 Score = 24.2 bits (50), Expect(2) = 9.5
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 2/21 (9%)
 Frame = -1

Query: 467 CETTARPS--TCPPAPPGGGG 411
           CE    P    CPP PPG  G
Sbjct: 138 CEPLTPPPCPACPPGPPGAPG 158



 Score = 21.0 bits (42), Expect(2) = 9.5
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -1

Query: 437 PPAPPGGGGQTSG 399
           PP PPG  G   G
Sbjct: 168 PPGPPGHDGPNGG 180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,170,864
Number of Sequences: 27780
Number of extensions: 261728
Number of successful extensions: 1030
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)