Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305B07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       25   0.41 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      21   5.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.0  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   8.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   8.7  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +1

Query: 163 HHRHHDNSIAQSRARQRCEAHRSRWRDA 246
           H RH ++S   +   ++ + + S+W+D+
Sbjct: 92  HERHFESSFGNNLHSEKAKFNESKWQDS 119


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 367 IHWNGHKIHKSPSSTG 414
           IHW+GH    SP   G
Sbjct: 133 IHWHGHHQKNSPYMDG 148


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 411  CARRGLVYLVSIPMNILVL 355
            C   G++YL+SIP   L+L
Sbjct: 1028 CIVPGIIYLLSIPSMYLLL 1046


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 411  CARRGLVYLVSIPMNILVL 355
            C   G++YL+SIP   L+L
Sbjct: 1028 CIVPGIIYLLSIPSMYLLL 1046


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 411  CARRGLVYLVSIPMNILVL 355
            C   G++YL+SIP   L+L
Sbjct: 1028 CIVPGIIYLLSIPSMYLLL 1046


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 411  CARRGLVYLVSIPMNILVL 355
            C   G++YL+SIP   L+L
Sbjct: 1028 CIVPGIIYLLSIPSMYLLL 1046


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 199 RARQRCEAHRSRWR 240
           + R RCE   S+WR
Sbjct: 6   KVRGRCEGKDSKWR 19


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 212 GVKLIDPDGEMLEQSWEA 265
           G+K++D  G  ++ SW A
Sbjct: 901 GLKVLDKSGRSVQLSWVA 918


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 76  SGSAVFNKNVSCLRMHFSGER 14
           SGS ++    SC+    SGER
Sbjct: 76  SGSKIWQMERSCMCCQESGER 96


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 200 EPDNGVKLIDPDGEMLEQS 256
           E D+G    DPD E+   S
Sbjct: 134 ESDSGASSADPDDELRSSS 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,028
Number of Sequences: 336
Number of extensions: 2537
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)