Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305B07f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21191| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 1e-36
SB_44584| Best HMM Match : DEAD_2 (HMM E-Value=0.12) 30 1.3
SB_58549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_18558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_19928| Best HMM Match : Neur_chan_memb (HMM E-Value=4e-08) 28 5.4
SB_55214| Best HMM Match : DUF1665 (HMM E-Value=3) 27 7.1
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_47864| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_30284| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_59294| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.20004e-41) 27 9.4
SB_29300| Best HMM Match : GFO_IDH_MocA (HMM E-Value=2.1e-17) 27 9.4
>SB_21191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 541
Score = 149 bits (362), Expect = 1e-36
Identities = 76/154 (49%), Positives = 99/154 (64%)
Frame = +2
Query: 32 HPKTTDIFIEYGTAGFRTKANLLEHVVYRMGLLAVIRSRVKNGRTIGIMITASHNLEPDN 211
+PK D YGTAGFRT+A+ LE V++RMG+LAVIRSR K G+ IG++ITASHN DN
Sbjct: 15 YPKL-DTKFSYGTAGFRTRADTLETVMFRMGMLAVIRSRAKEGQAIGVVITASHNPIYDN 73
Query: 212 GVKLIDPDGEMLEQSWEAIATKLANVSDNDLEATTAEIIKEVNANMTLKTSIFIGMDTRY 391
GVKL+DP GEML +SWE AT LAN NDL ++I E M +FI DTR
Sbjct: 74 GVKLVDPLGEMLNESWEKYATSLANA--NDLIGALKDVIHETKVEMCKPGKVFIARDTRP 131
Query: 392 TSPRLAQAAANGVMALKGTPKDFGIVTTPMXXFL 493
+ +A +G+ AL G D+G++TTP ++
Sbjct: 132 SGLAFTKALMDGIQALGGLYHDYGVLTTPQLHYM 165
>SB_44584| Best HMM Match : DEAD_2 (HMM E-Value=0.12)
Length = 540
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Frame = +2
Query: 116 RMGLLAVIRSR---VKNGRTIGIMITASHNLEPD--NGV------KLIDPDGEMLEQSWE 262
R GL+ VIRSR VK + + +T +L NG +L DPD + E+S++
Sbjct: 214 RKGLIRVIRSRVLQVKRQVVLKLQVTKMVHLNQSKLNGFVDKYKDELSDPDARVTEESYQ 273
Query: 263 AIATKLANVSDNDLEATT 316
+ + L + +N LEA T
Sbjct: 274 SFTSPLKFI-ENFLEALT 290
>SB_58549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +1
Query: 337 EC*YDTQNEYIHWNGHKIHKSPSSTGGC*WSHGAEGNAQGFRNCYHSXXXXSS*NVVT-I 513
EC + +E + GH H+ P GG H +G + R + S +VV+ +
Sbjct: 303 ECKAEQSSEQVIRRGHHEHRQPHLEGGVVTFHAGQGRGRALRVHFRSGALPPGRHVVSRV 362
Query: 514 IH 519
+H
Sbjct: 363 LH 364
>SB_18558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 193 VRCCYHDADGASIFNSGTNDSQETHTIHDML 101
+ CC+H DGA + T+ + T+ D+L
Sbjct: 103 LECCWHRQDGAGVTRDKTDKPSPSFTLLDLL 133
>SB_19928| Best HMM Match : Neur_chan_memb (HMM E-Value=4e-08)
Length = 173
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 134 VIRSRVKNGRTIGIM-ITASHNL-EPDNGVKLIDPDG 238
V R RVKN + S L EPD+G+ IDPDG
Sbjct: 54 VFRQRVKNREDYAQRELQRSQELIEPDDGLNPIDPDG 90
>SB_55214| Best HMM Match : DUF1665 (HMM E-Value=3)
Length = 452
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/83 (25%), Positives = 39/83 (46%)
Frame = +2
Query: 182 TASHNLEPDNGVKLIDPDGEMLEQSWEAIATKLANVSDNDLEATTAEIIKEVNANMTLKT 361
T+ N E D+ + D +++ ++ K +N ++ T E ++ V +L T
Sbjct: 149 TSVSNSESDSNISE-DDSSISASENYSRLSQKDSNSEASNSGPT--EYLRPVRTPPSL-T 204
Query: 362 SIFIGMDTRYTSPRLAQAAANGV 430
DTRY +PRL+ + NG+
Sbjct: 205 RASEYFDTRYVTPRLSDGSQNGI 227
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 27.5 bits (58), Expect = 7.1
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Frame = +2
Query: 125 LLAVIRSRVKNGRTIGIMITASHNLEPDNGVKLIDPDGEMLEQSWEAIATKLANVSDNDL 304
LLA I S + +T +L PD+ V DGE+L + D DL
Sbjct: 21 LLARIVSEMNKPLPDPTTVTKPSDLTPDSSVVSESEDGEVLGLDGLQLFVNAGLPVDRDL 80
Query: 305 EATTAEIIKEVNANMTLKTSIFIGMDTRYTSPR---LAQAAANGVMALKGTPKDFGIVTT 475
A +IK+V + + T + +P+ + + A+N KGTP VTT
Sbjct: 81 ---VAHLIKDVITDQIIATLGYPAPSATVGTPKTEEVEEMASNNSFP-KGTP-----VTT 131
Query: 476 PM 481
P+
Sbjct: 132 PI 133
>SB_47864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 133 CHSFQS*KWTHHRHHDNSIAQSRARQRCEAH 225
CH+F+S W+H S A SR C +H
Sbjct: 66 CHAFRSHTWSHRVMPWQSHALSRCVTPCRSH 96
>SB_30284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -2
Query: 229 IDELHTVVGLEIVRCCYHDADGASIFNSGTNDSQETHT-IHDMLQ 98
ID++ V +++ DG SI G +T T IH +LQ
Sbjct: 6 IDDVLNPVNFSVIKTSSSSTDGESIMKKGQTRKTQTKTVIHKVLQ 50
>SB_59294| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.20004e-41)
Length = 851
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 290 SDNDLEATTAEIIKEVNANMTLKTSIFIGMD 382
SD+D+E ++ + EVNA KT +G D
Sbjct: 289 SDDDIETNSSTFMLEVNAPSVGKTYTIVGRD 319
>SB_29300| Best HMM Match : GFO_IDH_MocA (HMM E-Value=2.1e-17)
Length = 634
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 64 RHCRISYKGQFIGACRVSYGSLGC 135
R CRI Y+ F C+++Y L C
Sbjct: 436 RACRIGYEDPFRCTCQMNYTGLSC 459
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,888,753
Number of Sequences: 59808
Number of extensions: 344671
Number of successful extensions: 825
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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