Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305B07f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 26 0.27
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 26 0.27
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 26 0.27
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 26 0.27
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 26 0.27
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 26 0.27
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 26 0.27
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 26 0.27
DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein. 24 1.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 4.4
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 5.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.7
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.27
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 160 THHRHHDNSIAQSRARQRCEAHRSRWRD 243
T+H HHD QSR+ RSR ++
Sbjct: 6 TNHSHHDERFRQSRSEDSETGLRSRTQE 33
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.27
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 160 THHRHHDNSIAQSRARQRCEAHRSRWRD 243
T+H HHD QSR+ RSR ++
Sbjct: 6 TNHSHHDERFRQSRSEDSETGLRSRTQE 33
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.27
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 160 THHRHHDNSIAQSRARQRCEAHRSRWRD 243
T+H HHD QSR+ RSR ++
Sbjct: 6 TNHSHHDERFRQSRSEDSETGLRSRTQE 33
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.27
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 160 THHRHHDNSIAQSRARQRCEAHRSRWRD 243
T+H HHD QSR+ RSR ++
Sbjct: 6 TNHSHHDERFRQSRSEDSETGLRSRTQE 33
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.27
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 160 THHRHHDNSIAQSRARQRCEAHRSRWRD 243
T+H HHD QSR+ RSR ++
Sbjct: 6 TNHSHHDERFRQSRSEDSETGLRSRTQE 33
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.27
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 160 THHRHHDNSIAQSRARQRCEAHRSRWRD 243
T+H HHD QSR+ RSR ++
Sbjct: 6 TNHSHHDERFRQSRSEDSETGLRSRTQE 33
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.8 bits (54), Expect = 0.27
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 160 THHRHHDNSIAQSRARQRCEAHRSRWRD 243
T+H HHD QSR+ RSR ++
Sbjct: 6 TNHSHHDERFRQSRSEDSETGLRSRTQE 33
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.27
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 160 THHRHHDNSIAQSRARQRCEAHRSRWRD 243
T+H HHD QSR+ RSR ++
Sbjct: 6 TNHSHHDERFRQSRSEDSETGLRSRTQE 33
>DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein.
Length = 135
Score = 23.8 bits (49), Expect = 1.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 248 EQSWEAIATKLANVSDNDLEATTAEIIKEVNANMTLK 358
E + T+ + +SD DL +A+++K + TLK
Sbjct: 94 ENGVNKLITECSAISDADLAVKSAKLLKCIGKYKTLK 130
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 212 GVKLIDPDGEMLEQSWEA 265
G+K++D G ++ SW A
Sbjct: 881 GLKVLDKSGRSVQLSWAA 898
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 253 LLKHLAIWIDELHTVVGLEIVRC 185
+L L +WI + ++VG I+ C
Sbjct: 484 VLDRLFLWIFTIASIVGTFIILC 506
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = +2
Query: 239 EMLEQSWEAIATKLANVSDNDLEATTAEIIKEVNAN 346
EM Q + +A NV +IK N N
Sbjct: 743 EMYHQQLQGVAKNKKNVGSMSRNKALLPVIKPANVN 778
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,684
Number of Sequences: 438
Number of extensions: 3049
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -