Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305B02f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 131 5e-32
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 56 2e-09
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 55 7e-09
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 49 4e-07
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 49 5e-07
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 49 5e-07
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 48 8e-07
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 48 8e-07
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 47 2e-06
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 46 3e-06
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 45 6e-06
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 45 6e-06
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 45 8e-06
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 44 1e-05
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 44 2e-05
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 43 2e-05
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 42 6e-05
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 41 1e-04
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 41 1e-04
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 38 7e-04
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 38 0.001
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 38 0.001
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 37 0.002
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 37 0.002
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 36 0.003
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 36 0.004
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 35 0.008
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 34 0.011
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 34 0.011
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 33 0.020
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 33 0.020
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 33 0.026
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 33 0.034
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 32 0.045
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 31 0.079
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 31 0.079
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 31 0.079
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 31 0.14
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 30 0.18
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 30 0.18
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 30 0.24
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 30 0.24
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 29 0.42
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 29 0.42
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 29 0.56
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 28 0.73
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 28 0.73
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 28 0.73
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 28 0.97
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 27 1.3
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 27 1.7
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 27 2.2
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 26 3.0
SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|c... 25 5.2
SPAC4F10.18 |||WD repeat protein, human NUP37 family|Schizosacch... 25 5.2
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|... 25 5.2
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 25 6.8
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 25 6.8
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 25 6.8
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 6.8
SPCC1020.09 |||WD repeat protein, human WDR79 family|Schizosacch... 25 9.0
SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.0
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 25 9.0
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 25 9.0
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|... 25 9.0
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 25 9.0
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 25 9.0
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 131 bits (317), Expect = 5e-32
Identities = 64/143 (44%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +3
Query: 90 SQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKT 269
S +S + + KDVEV+ PP+D++S L FSP + +L A SWD +VR +EV+ +G++
Sbjct: 10 STVSNATGDLKKDVEVAQPPEDSISDLAFSPQA----EYLAASSWDSKVRIYEVQATGQS 65
Query: 270 VPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIK 449
+ KA GPVL V W DGTKV S DKS K +D+ Q QVAAHD V+ +++
Sbjct: 66 IGKALYEHQGPVLSVNWSRDGTKVASGSVDKSAKVFDIQTGQNQQVAAHDDAVRCVRFVE 125
Query: 450 APNYTCLMTT-SWDKTLKFWDTR 515
A + ++ T SWDKTLK+WD R
Sbjct: 126 AMGTSPILATGSWDKTLKYWDLR 148
Score = 25.0 bits (52), Expect = 6.8
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +3
Query: 150 DDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGK----TVPKAAQPMD--GPVLD 311
DD V + F T L GSWD ++ W++ S ++P+ MD P+L
Sbjct: 115 DDAVRCVRFVEAMGT-SPILATGSWDKTLKYWDLRQSTPIATVSLPERVYAMDCVHPLLT 173
Query: 312 VA 317
VA
Sbjct: 174 VA 175
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 56.4 bits (130), Expect = 2e-09
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
+ ++ SWD +R W++E T D VL V+ D +V S DK++K W++
Sbjct: 77 YALSASWDKTIRLWDLEKGECTHQFVGHTSD--VLSVSISPDNRQVVSGSRDKTIKIWNI 134
Query: 384 AAN--QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
N T+ H V + P+ ++ WDK +K WD T
Sbjct: 135 IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLET 181
Score = 38.7 bits (86), Expect = 5e-04
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP---VLDVAWHDDGTKVFMASTDKSVKCW 377
L++GS D + W + A + + G V D A D AS DK+++ W
Sbjct: 31 LLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLW 90
Query: 378 DLAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
DL + T Q H + V + +P+ +++ S DKT+K W+
Sbjct: 91 DLEKGECTHQFVGHTSDVLSVS--ISPDNRQVVSGSRDKTIKIWN 133
Score = 26.2 bits (55), Expect = 3.0
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKT-------VPKAAQPMDGPVLDVA 317
++AL FSP + + + + +R +++ET K V + + + +
Sbjct: 236 INALVFSP-----NRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLT 290
Query: 318 WHDDGTKVFMASTDKSVKCWDL 383
W DG +F TD ++ W +
Sbjct: 291 WSPDGQTLFSGWTDNLIRVWQV 312
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 54.8 bits (126), Expect = 7e-09
Identities = 32/119 (26%), Positives = 56/119 (47%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 338
VS+++F+P L T L++GSWD VR W ++ T + P++ V+ DGT
Sbjct: 141 VSSIDFNP----LGTLLVSGSWDETVRIWNLQDG--TCLRMLPAHSEPIISVSISADGTL 194
Query: 339 VFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
AS D + WD+ + Q ++ V + N L+ ++ + ++ WD R
Sbjct: 195 CATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYR 253
Score = 34.3 bits (75), Expect = 0.011
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQ-VAAHDAPVKTCHWIKAPNYTCLMTT 479
+ V W + AS DK+++ WD +++ + H V + + P T L++
Sbjct: 99 ISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDF--NPLGTLLVSG 156
Query: 480 SWDKTLKFWD 509
SWD+T++ W+
Sbjct: 157 SWDETVRIWN 166
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 49.2 bits (112), Expect = 4e-07
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
T L++GS DC V+ W + GK + + GPV V D V S D ++K W
Sbjct: 364 TLLVSGSADCTVKLWHF-SGGKRI--TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWS 420
Query: 381 LAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
L N + +AH PV++ + ++C S D T+K WD
Sbjct: 421 LETNTCLHTFSAHIGPVQSLALADSRLFSC----SLDGTIKQWD 460
Score = 31.5 bits (68), Expect = 0.079
Identities = 22/104 (21%), Positives = 41/104 (39%)
Frame = +3
Query: 195 LHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKC 374
+ L +GS+D +R W + T + L D K+ S DK+++
Sbjct: 282 VRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF----DQCKLISGSMDKTIRI 337
Query: 375 WDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
W+ ++ + + C + T L++ S D T+K W
Sbjct: 338 WNYRTSECISILHGHTDSVLCLTFDS---TLLVSGSADCTVKLW 378
Score = 29.1 bits (62), Expect = 0.42
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 351 STDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTA 521
S D +++ W+LA Q + + + TC + L++ S DKT++ W+ RT+
Sbjct: 290 SYDATIRLWNLATFQQVALLEGHSSGVTCLQF---DQCKLISGSMDKTIRIWNYRTS 343
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 48.8 bits (111), Expect = 5e-07
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
L++ S D Q+ W+ + S K + K V ++ DG + AS D SV+ WD
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITKM-HGHQKVVNHASFSPDGRCIATASFDSSVRLWDGK 419
Query: 387 ANQTMQ-VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
+ + + H A V C W + + L+++S D TLK WD R+
Sbjct: 420 TGKFLATLRGHVAAVYQCAW--STDSRLLVSSSQDTTLKVWDVRS 462
Score = 42.7 bits (96), Expect = 3e-05
Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWH------DDGTKVFMA-STD 359
+ + GS D +R W+ + G + A + P++ + W D G + + S D
Sbjct: 190 SIIATGSMDNTIRFWDPK-KGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKD 248
Query: 360 KSVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
+V+ W++ + ++ H AP+ W N+ + ++S+DKT++ WD +
Sbjct: 249 NTVRIWNVKLRTLLFTLSGHTAPITCVRW-GGQNW--IYSSSYDKTIRIWDAK 298
Score = 37.1 bits (82), Expect = 0.002
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 338
V+ FSP + T S+D VR W+ +T GK + + V AW D
Sbjct: 392 VNHASFSPDGRCIAT----ASFDSSVRLWDGKT-GKFLATLRGHV-AAVYQCAWSTDSRL 445
Query: 339 VFMASTDKSVKCWDLAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
+ +S D ++K WD+ + + + H+ V W +P+ + + DK ++ W
Sbjct: 446 LVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDW--SPDGQRVASGGADKAVRIW 500
Score = 31.5 bits (68), Expect = 0.079
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 294 DGPVLDVAWHDD-GTKVFMASTDKSVKCWDLAANQTMQ-VAAHDAPVKTCHWIKAPNYTC 467
DG ++ + +++ S D + + WD + + H V W AP+ +
Sbjct: 134 DGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAW--APDASI 191
Query: 468 LMTTSWDKTLKFWDTR 515
+ T S D T++FWD +
Sbjct: 192 IATGSMDNTIRFWDPK 207
Score = 30.3 bits (65), Expect = 0.18
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
L +GS D VR W V+ +T+ P+ V W ++ +S DK+++ WD
Sbjct: 242 LASGSKDNTVRIWNVKL--RTLLFTLSGHTAPITCVRWGGQNW-IYSSSYDKTIRIWDAK 298
Query: 387 ANQTMQV 407
+ + +
Sbjct: 299 DGKCLHI 305
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 48.8 bits (111), Expect = 5e-07
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
+L++ S+D R W+V T + + + +G + +A DG+ V D + WDL
Sbjct: 279 YLVSASFDTTWRLWDVHTGVELLMQEGHS-EG-IFSIACQPDGSLVSSGGNDAIGRIWDL 336
Query: 384 AANQTMQVA-AHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
+ +++ V H + W +PN L T+S D T+K WD R
Sbjct: 337 RSGKSIMVLDEHIRQIVAMAW--SPNGYQLATSSADDTVKIWDLR 379
Score = 42.3 bits (95), Expect = 4e-05
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +3
Query: 213 AGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL-AA 389
+G D R W++ SGK++ + + ++ +AW +G ++ +S D +VK WDL
Sbjct: 324 SGGNDAIGRIWDLR-SGKSIMVLDEHIR-QIVAMAWSPNGYQLATSSADDTVKIWDLRKV 381
Query: 390 NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
+ + AH + V +I++ + T+ +D +K W+
Sbjct: 382 SLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWN 421
Score = 25.8 bits (54), Expect = 3.9
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Frame = +3
Query: 75 STMFGSQISTGSNNPNKDVEVSSPPDDTVSALEFSP-----PSVTLHTFLIAGSWDCQVR 239
S +G Q+ +++ +V++ D VS L++ P + + L G+ D V
Sbjct: 189 SGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVC 248
Query: 240 CWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
W+ S T + V VA+H G + AS D + + WD+
Sbjct: 249 LWKASQS--TPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDV 294
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 48.0 bits (109), Expect = 8e-07
Identities = 31/121 (25%), Positives = 59/121 (48%)
Frame = +3
Query: 153 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDG 332
D +S++ FSP ++ LIAG WD + +++ + + + K + P+L + + D+
Sbjct: 13 DGISSVIFSP---SVKNELIAGCWDGSLLHYQISENPELLGK--YDLSSPILSLEYTDEK 67
Query: 333 TKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 512
T + + + D +V DL + H V ++ N C ++ SWDK+ + WD
Sbjct: 68 TAL-VGNLDGTVTTLDLNTRNHEFLGNHGKGVSCISKLRLEN--CFISGSWDKSFRVWDV 124
Query: 513 R 515
R
Sbjct: 125 R 125
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 48.0 bits (109), Expect = 8e-07
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
+LI+G V+ +E + K Q + V DVA+ + +K AS D S+K W+
Sbjct: 137 WLISGDGGGMVKYFEPNLNNV---KIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNF 193
Query: 384 -AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
+ + +++ H VKT W P+ L + S D +KFWD RT
Sbjct: 194 HMSTEELKLTGHGWDVKTVDW--HPSKGLLASGSKDNLVKFWDPRT 237
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 46.8 bits (106), Expect = 2e-06
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMA-STDKSVKCWDL 383
L+AG V+ +++ T +++ +A PV + F++ S DK+VK WDL
Sbjct: 96 LLAGDATGLVQIFDLST--RSILRALDAHQFPVHVTQFCPYANTTFLSGSDDKTVKVWDL 153
Query: 384 AANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTA 521
+ ++ H+ V+T W+ A T L++ +D T++ WDTR A
Sbjct: 154 STGAVQYDLSGHEDYVRTASWMSA---TRLVSGGYDGTIRLWDTRIA 197
Score = 34.7 bits (76), Expect = 0.008
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
T L++G +D +R W+ + P+ G +DV +++ S+K WD
Sbjct: 178 TRLVSGGYDGTIRLWDTRIAD---PEVMSFSHGEAIDVVLPMQSGSTVISAGGPSIKVWD 234
Query: 381 LAANQ---TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
L A + T +++ H + TC + + N T L++ D +K ++
Sbjct: 235 LVAGRQTPTKKLSNHQKSI-TCLAMNSEN-TRLLSGGLDGHVKIYN 278
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 46.0 bits (104), Expect = 3e-06
Identities = 26/102 (25%), Positives = 54/102 (52%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
F+++GS D R W+VET G+ + K ++ V +A + + + S D+ ++ W +
Sbjct: 416 FIVSGSGDRTARLWDVET-GQCILKL--EIENGVTAIAISPNDQFIAVGSLDQIIRVWSV 472
Query: 384 AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
+ ++ H V + + +P+ + L++ S DKT+K W+
Sbjct: 473 SGTLVERLEGHKESVYSIAF--SPDSSILLSGSLDKTIKVWE 512
Score = 38.3 bits (85), Expect = 7e-04
Identities = 25/88 (28%), Positives = 45/88 (51%)
Frame = +3
Query: 150 DDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDD 329
++ V+A+ SP F+ GS D +R W V SG V + + V +A+ D
Sbjct: 443 ENGVTAIAISPND----QFIAVGSLDQIIRVWSV--SGTLVERLEGHKES-VYSIAFSPD 495
Query: 330 GTKVFMASTDKSVKCWDLAANQTMQVAA 413
+ + S DK++K W+L A +++ ++A
Sbjct: 496 SSILLSGSLDKTIKVWELQATRSVGLSA 523
Score = 31.9 bits (69), Expect = 0.060
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Frame = +3
Query: 153 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQP-------MDGP--- 302
++V ++ FSP S + L++GS D ++ WE++ + A +P G
Sbjct: 485 ESVYSIAFSPDS----SILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDF 540
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQT 398
VL VA D S D+S++ WDL Q+
Sbjct: 541 VLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQS 572
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 45.2 bits (102), Expect = 6e-06
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = +3
Query: 129 VEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVL 308
+E + + VS+L F+ + L +GSWD VR W++ + V P D VL
Sbjct: 460 LETLAGHEGPVSSLSFNSSG----SLLASGSWDKTVRIWDIFSRSGIVEPLPIPSD--VL 513
Query: 309 DVAWHDDGTKVFMASTDKSVKCWDL 383
+A+H DG +V +AS D + W++
Sbjct: 514 SLAFHPDGKEVCVASLDGQLTFWNV 538
Score = 35.5 bits (78), Expect = 0.005
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDK-SVKCWDL 383
L + S D VR W++ + P +A G V S D + W +
Sbjct: 396 LFSSSLDGSVRAWDL-IRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSV 454
Query: 384 AANQTMQ-VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
Q ++ +A H+ PV + + + + L + SWDKT++ WD
Sbjct: 455 QTGQLLETLAGHEGPVSSLSFNSSGSL--LASGSWDKTVRIWD 495
Score = 27.5 bits (58), Expect = 1.3
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 231 QVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAAN-QTMQV 407
Q+ WE + S V K D + + + DG ++ + D +K WD+ + +
Sbjct: 320 QLLVWEWQ-SESYVLKQQSHYDA-LSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTF 377
Query: 408 AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
H + V + K N L ++S D +++ WD
Sbjct: 378 TQHTSAVSGLCFSKRGN--VLFSSSLDGSVRAWD 409
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 45.2 bits (102), Expect = 6e-06
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
T++ G D QVR W+ T + + A + +D ++ ++WH G + D S+ W
Sbjct: 117 TYIATGGMDSQVRLWKSSTGFEFIT-AFETVD-EIVWLSWHPKGLFLAAGCNDGSIWMWS 174
Query: 381 LAANQTMQVA-AHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
L + + +QV H APV +I L T TL W+ T
Sbjct: 175 LPSGKVVQVMYGHTAPVNAGKFIPPGVGKRLATVDDSGTLIVWNPAT 221
Score = 30.7 bits (66), Expect = 0.14
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 348 ASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
AS D +V +D A+ + + H+ V C ++ PN L+T D ++ WD R+
Sbjct: 303 ASVDGTVALYDSASLKFRKSLPHEQAVIDCKFL--PNTPYLLTACADCVIRKWDVRS 357
Score = 29.5 bits (63), Expect = 0.32
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 138 SSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVA 317
S P + V +F P + +L+ DC +R W+V SG+ + + + P+L +A
Sbjct: 322 SLPHEQAVIDCKFLPNT----PYLLTACADCVIRKWDVR-SGQLLGEYTGHQE-PILCMA 375
Query: 318 WHDDGTKVFMASTDKSVKCWD 380
DG +V S D + +D
Sbjct: 376 ITPDGKRVVTGSDDTELLVFD 396
Score = 27.1 bits (57), Expect = 1.7
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 153 DTVSALEFSPPSVTLHTFLIA-GSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDD 329
D+V ++ +P +H+ L A G D W++ T+G+ + + D ++ + W D
Sbjct: 62 DSVFSVSINP----VHSNLCASGGGDDLGYIWDI-TTGEQICQLTGHKDS-IVAIDWSFD 115
Query: 330 GTKVFMASTDKSVKCW 377
GT + D V+ W
Sbjct: 116 GTYIATGGMDSQVRLW 131
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 44.8 bits (101), Expect = 8e-06
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 338
+S L F P S L L++GS D Q++ WEV +++ + Q P+ D+++ DG
Sbjct: 269 ISCLRFFPISGHL---LLSGSMDNQIKIWEVYHD-RSLLRTFQGHARPIRDLSFSQDGRS 324
Query: 339 VFMASTDKSVKCWD 380
S DK++K WD
Sbjct: 325 FLSTSFDKTIKLWD 338
Score = 33.5 bits (73), Expect = 0.020
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 330 GTKVFMASTDKSVKCWDLAANQTM--QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKF 503
G + S D +K W++ ++++ H P++ + + + ++TS+DKT+K
Sbjct: 279 GHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSF--SQDGRSFLSTSFDKTIKL 336
Query: 504 WDT 512
WDT
Sbjct: 337 WDT 339
Score = 25.0 bits (52), Expect = 6.8
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +3
Query: 210 IAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMAST-DKSVKCWDLA 386
++ S+D ++ W+ E GK + + D F+A T DK + +D+
Sbjct: 326 LSTSFDKTIKLWDTEL-GKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIR 384
Query: 387 ANQTMQVAAHD-APVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
+ +Q H + + +++ N +TTS D +++FW+ T
Sbjct: 385 SPDIVQAYDHHLGGINSITFLE--NGKRFVTTSDDSSMRFWEYGT 427
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 44.0 bits (99), Expect = 1e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 210 IAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAA 389
+ G+ D RC+++ S + + + + P P+ V + G +F+A DK+ + WD +
Sbjct: 206 VTGAEDGIARCFDIRASAE-IFQYSSPSSSPINSVLFSKSGKLLFIAK-DKTCEVWDSIS 263
Query: 390 NQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 512
++T+ + H+ + + + T L T SWD+ ++ W +
Sbjct: 264 SKTITSLTGHENRISSL--ALTSDGTMLATGSWDECVRLWSS 303
Score = 26.2 bits (55), Expect = 3.0
Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
+L++ S + + W++ TS K A + ++ A+ + + +D
Sbjct: 35 YLLSASTNDVLLVWDLHTSNKVAFFEAPSVW--IMTCAFSPSTKSIAAGGLNNFCVVYDT 92
Query: 384 AANQT--MQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTA 521
+ +++ H V C ++ + L+T S DKT FWD A
Sbjct: 93 SVPDADPVELVGHAGFVSCCKYVDDGH---LLTGSGDKTCMFWDIEQA 137
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 297 GPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAP---VKTC 437
G + D+ DG + AST+ + WDL + + +VA +AP + TC
Sbjct: 22 GKIPDIDISTDGKYLLSASTNDVLLVWDL--HTSNKVAFFEAPSVWIMTC 69
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 43.6 bits (98), Expect = 2e-05
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Frame = +3
Query: 93 QISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTV 272
Q+ + N + V D + AL P FL+ S D ++C+ + S K V
Sbjct: 79 QVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQ----PFLLTSSDDMTIKCFNWDMSWKCV 134
Query: 273 PKAAQPMDGPVLDVAWHDDGTKVFMAST-DKSVKCWDLA---ANQTMQVAAHDAPVKTCH 440
+ + V+ +A + T F +S D +VK W AN T+Q AHD V +
Sbjct: 135 -QTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQ--AHDRGVNYVN 191
Query: 441 WIKAPNYTCLMTTSWDKTLKFWDTRT 518
+ A + L+T D +K WD +T
Sbjct: 192 YYPAGDKPYLITAGDDNLIKVWDYQT 217
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 43.2 bits (97), Expect = 2e-05
Identities = 26/106 (24%), Positives = 44/106 (41%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
++ +G D Q+ W V K G + D+ W D V+ +S+D + WD
Sbjct: 63 SYFASGGMDRQILLWNVFGDVKNYG-VLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWD 121
Query: 381 LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
+ Q ++ A V + L + S D T+K WD+R+
Sbjct: 122 AVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRS 167
Score = 40.3 bits (90), Expect = 2e-04
Identities = 28/103 (27%), Positives = 49/103 (47%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
L + S DC ++ W+ + K K + P+ VA GT+VF+ D ++K WDL
Sbjct: 151 LTSVSDDCTMKVWD--SRSKDCIKTIEEKY-PLTAVAIAQQGTQVFIGGIDGAIKIWDLR 207
Query: 387 ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
N V + T I + + + L++ S D T++ +D +
Sbjct: 208 NNHCSHVLKGHKDIITSLAI-SKDGSSLLSNSMDNTVRIFDVK 249
Score = 29.9 bits (64), Expect = 0.24
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPV-------LDVAWHDDGTKVFMASTDKS 365
L++ S D VR ++V+ + + Q +G + L VAW + V S+DK+
Sbjct: 234 LLSNSMDNTVRIFDVKPFA-SAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKN 292
Query: 366 VKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTL 497
V W + + H+ V H P+ +++ S D+T+
Sbjct: 293 VYVWSATGDLRYVLPGHEGSVN--HVDFHPHQDIILSCSSDRTI 334
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 41.9 bits (94), Expect = 6e-05
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
L++GS+D +R W V T + + V + + S DKS++ WDL+
Sbjct: 520 LVSGSYDSSIRIWRVSTGECLYHLRGHSL--RIYSVLYEPERNICISGSMDKSIRVWDLS 577
Query: 387 ANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
V HDA V + + L++ S D T++ WD T
Sbjct: 578 TGTCKYVLEGHDAFVTLLNVFQ----NRLISGSADSTIRIWDLNT 618
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 40.7 bits (91), Expect = 1e-04
Identities = 25/100 (25%), Positives = 46/100 (46%)
Frame = +3
Query: 210 IAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAA 389
+A + + VR +++ TS + + V +A+H DG + +S D +VK WD+ A
Sbjct: 55 LAAAGNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRA 114
Query: 390 NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
+ H +PV + PN L++ ++ WD
Sbjct: 115 PSVQRNYDHKSPVNDL--LIHPNQGELLSCDQSGRVRAWD 152
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 40.7 bits (91), Expect = 1e-04
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +3
Query: 120 NKDVEVSSPPDDTVSALEFS-PPSVTLHTFLIAGSWDCQVRCWE-VETSGKTVPKA-AQP 290
+ V +S+ D+TV +F P TL +F + S + + E +G P +
Sbjct: 208 SSSVFISASADNTVGIWDFERSPETTLESFSSSISKKRRRKNAEFTPQAGARSPLILCEG 267
Query: 291 MDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPV 428
GPV+D+ + DD + + D ++K WDL Q + AP+
Sbjct: 268 HTGPVMDIVFSDDPSVAYSVGQDHTIKTWDLITGQNVDSKITKAPL 313
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 38.3 bits (85), Expect = 7e-04
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +3
Query: 192 TLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVK 371
T L + S D ++ W+ E K V + MD ++++ DGT++ S DK V+
Sbjct: 145 TAANVLASSSADNTIKLWDCE---KGVAHVSLKMDVMCQSMSFNADGTRLVTTSRDKKVR 201
Query: 372 CWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSW----DKTLKFWD 509
WD ++ + V A K + + TT + D+ + WD
Sbjct: 202 VWDPRTDKPVSVGNGHAGAKNPRVVWLGSLDRFATTGFSKMSDRQIALWD 251
Score = 31.1 bits (67), Expect = 0.10
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 312 VAWHDDGTKVFMAST-DKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWD 488
V +H V +S+ D ++K WD D ++ + + T L+TTS D
Sbjct: 140 VQYHPTAANVLASSSADNTIKLWDCEKGVAHVSLKMDVMCQSMSF--NADGTRLVTTSRD 197
Query: 489 KTLKFWDTRT 518
K ++ WD RT
Sbjct: 198 KKVRVWDPRT 207
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 37.9 bits (84), Expect = 0.001
Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 12/131 (9%)
Frame = +3
Query: 150 DDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD----------- 296
++ ++ EFSP S T + G + +R W ++ K++PK+ D
Sbjct: 324 NNNMNCAEFSPDS----TMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHS 379
Query: 297 GPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCLM 473
GPV + D + S D S + W + + H PV + +Y
Sbjct: 380 GPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHY--FA 437
Query: 474 TTSWDKTLKFW 506
T S D+T + W
Sbjct: 438 TASHDQTAQLW 448
Score = 29.1 bits (62), Expect = 0.42
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 312 VAWHDDGTKVFMASTDKSVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWD 488
V +H + V S+DK+ + WD+ +++V H PV AP+ + + +
Sbjct: 469 VTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAV--AIAPDGHTMASADSE 526
Query: 489 KTLKFWDTRT 518
+ WD T
Sbjct: 527 GLIHLWDIGT 536
Score = 26.2 bits (55), Expect = 3.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEV 251
T L++G DC VR W+V
Sbjct: 560 TVLVSGGSDCTVRAWDV 576
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 37.5 bits (83), Expect = 0.001
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Frame = +3
Query: 156 TVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGT 335
TV L SP H +L + D V+CW++ET+ K + + G V + H
Sbjct: 207 TVRGLAVSPR----HPYLFSCGEDKMVKCWDLETN-KVIRHYHGHLSG-VYALKLHPTLD 260
Query: 336 KVFMASTDKSVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNY-TCLMTTSWDKTLKFWD 509
+ A D + WD+ Q + V + H + V + + + ++T S D T++ WD
Sbjct: 261 VLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVAS---LAVQEFDPQVVTGSMDSTIRLWD 317
Score = 36.3 bits (80), Expect = 0.003
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 339 VFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKA-PNYTCLMTTSWDKTLKFWDTR 515
+F DK VKCWDL N+ + + + + +K P L+T D + WD R
Sbjct: 220 LFSCGEDKMVKCWDLETNKV--IRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMR 277
Query: 516 T 518
T
Sbjct: 278 T 278
Score = 33.5 bits (73), Expect = 0.020
Identities = 24/86 (27%), Positives = 37/86 (43%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 338
V AL+ P TL + AG D R W++ T + V +A + +
Sbjct: 250 VYALKLHP---TLDVLVTAGR-DAVARVWDMRTRQNVHVLSGHK--STVASLAVQEFDPQ 303
Query: 339 VFMASTDKSVKCWDLAANQTMQVAAH 416
V S D +++ WDLAA +T+ H
Sbjct: 304 VVTGSMDSTIRLWDLAAGKTLTTLTH 329
Score = 31.5 bits (68), Expect = 0.079
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 357 DKSVKCWDLAAN-QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
D+++K WDLA+ + + H A V+ +P + L + DK +K WD T
Sbjct: 184 DRTIKIWDLASGVLKLTLTGHIATVRGL--AVSPRHPYLFSCGEDKMVKCWDLET 236
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 37.1 bits (82), Expect = 0.002
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSV-KCW 377
++++ S D ++ W+ + S T+ DV + F+A+ D + + W
Sbjct: 148 SYVLTASQDGLIKLWDYKESSSTITFRGN--SEAARDVVFSPSEPNEFVAAYDSGILQKW 205
Query: 378 DLAANQT--MQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 512
D+ + +++AAH+ V ++ +PN L + DKT++ WD+
Sbjct: 206 DIRFPKLPFLKLAAHNGVVLCVNY--SPNGVFLASCGRDKTIRIWDS 250
Score = 26.2 bits (55), Expect = 3.0
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 10/105 (9%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWH----- 323
V + +SP V FL + D +R W+ TS K P+ V W
Sbjct: 224 VLCVNYSPNGV----FLASCGRDKTIRIWD-STSNKKKSLITINNVSPLNCVRWRPANQQ 278
Query: 324 DDGTKVFMAST---DKSVKCWDLAANQT--MQVAAHDAPVKTCHW 443
G+ +S+ D ++ WD+ V+ HD+ V T HW
Sbjct: 279 SRGSNQLASSSLVGDTAINVWDITRPYIPYRTVSCHDSIVSTMHW 323
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 294 DGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAA--HDAPVKTCHW 443
+G VL V + +G + DK+++ WD +N+ + + +P+ W
Sbjct: 221 NGVVLCVNYSPNGVFLASCGRDKTIRIWDSTSNKKKSLITINNVSPLNCVRW 272
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
L +GS D +R W V+T + + + G +L + + GT+V A+ D VK W L+
Sbjct: 522 LASGSGDRTIRIWNVDT--QQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLS 579
Query: 387 ANQ 395
+ +
Sbjct: 580 SGE 582
Score = 34.3 bits (75), Expect = 0.011
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 327 DGTKVFMASTDKSVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKF 503
DG + AS DK++K WD + + + V H V C + P L + S D+T++
Sbjct: 476 DGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSF--NPFSRQLASGSGDRTIRI 533
Query: 504 WDTRT 518
W+ T
Sbjct: 534 WNVDT 538
Score = 32.7 bits (71), Expect = 0.034
Identities = 20/105 (19%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
L +G+ D +VR W++ +S + + + + G+ + S DK+V+ W++
Sbjct: 162 LASGADDSRVRLWDLNSSRSMA--VFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
Query: 387 ANQTMQVAAHDAPVKTCHWIKA-PNYTCLMTTSWDKTLKFWDTRT 518
++ V+ W+ P L T + WD ++
Sbjct: 220 KRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKS 264
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 90 SQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVE--TSG 263
S++ N ++ + V + L F P +FL++GS D V+ W ++ ++
Sbjct: 169 SRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTG----SFLLSGSRDKTVQVWNIKKRSAV 224
Query: 264 KTVP 275
+T+P
Sbjct: 225 RTIP 228
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 36.3 bits (80), Expect = 0.003
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAAN-QTMQVAAHDAPVKTCHWIKAPNYTCLMTT 479
V +AW DG ++ D V+ WD ++ H+A VK W P + L+ T
Sbjct: 307 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAW--CPWQSNLLAT 364
Query: 480 ---SWDKTLKFWDTRT 518
+ DK + FW+ T
Sbjct: 365 GGGTMDKQIHFWNAAT 380
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 35.9 bits (79), Expect = 0.004
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
+++A + VR W V+ SG + + A +LD+ D TK DK ++ WD+
Sbjct: 28 YVLAAGNERVVRLWNVK-SGACIHEYAGH-GHEILDLDLVYDSTKFASCGGDKFIQVWDV 85
Query: 384 AANQT-MQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
+ ++ H A + T + + + + L + S+D ++ WD R+
Sbjct: 86 NTGKVDRRLGGHLAQINTIRYNE--DSSILASGSFDSKVRLWDCRS 129
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 34.7 bits (76), Expect = 0.008
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 300 PVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMT 476
P+ DVA+ DG + +AS + +VK +++ + Q+ + A H +PN L
Sbjct: 97 PIRDVAYSVDGNWIAIASDETAVKV--VSSTDSSQIFSLRPAKASNKHVTYSPNGNFLAV 154
Query: 477 TSWDKTLKFWDTRT 518
+S + L F+DT+T
Sbjct: 155 SSCNGILYFYDTQT 168
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 34.3 bits (75), Expect = 0.011
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +3
Query: 279 AAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAA----HDAPVKTCHWI 446
A + + V +AW +G + S DKSV W+ + A H VK W
Sbjct: 373 ALEGHENEVKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTW- 431
Query: 447 KAPNYTCLMTTSWDKTLKFW 506
P L++ S+D ++ FW
Sbjct: 432 -HPTEDLLVSGSYDNSICFW 450
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 34.3 bits (75), Expect = 0.011
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +3
Query: 312 VAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDK 491
+ W D + S DKSV WD + ++ H V C W+ P+ +T S D
Sbjct: 261 IRWSPDDRYLLSCSCDKSVILWDAFTGEKLRDYKHGFSVSCCCWL--PDGLSFITGSPDC 318
Query: 492 TLKFW 506
+ W
Sbjct: 319 HITHW 323
Score = 25.8 bits (54), Expect = 3.9
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHD-DGTKVFMASTDKSVKCW 377
TF+++GS D ++R W E SGK + + + V VA++ D + A D +V+ W
Sbjct: 441 TFVLSGSEDDKIRIWHRE-SGKLLATLSGHVK-CVNYVAYNPVDPYQFASAGDDNTVRIW 498
Query: 378 DLAANQTMQ 404
N Q
Sbjct: 499 SNKDNPRRQ 507
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 464 RVVGRFDPVASLHWSVVRRYL 402
R++G D VA + WS RYL
Sbjct: 250 RLIGHIDTVAYIRWSPDDRYL 270
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 33.5 bits (73), Expect = 0.020
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 315 AWHDDGTKVFMASTDKSVKCWDLAANQTMQV---AAHDAPVKTCHWIKAPNYTCLMTTSW 485
A+H + A D+ VK W + A++ +V H V C + P+ +++ S
Sbjct: 219 AFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCC--LFHPHQELILSASE 276
Query: 486 DKTLKFWD 509
DKT++ WD
Sbjct: 277 DKTIRVWD 284
Score = 31.5 bits (68), Expect = 0.079
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 DGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCL 470
DGPV +A+H D V W+ + + + + H V+ C + Y +
Sbjct: 53 DGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTF--HHEYPWI 110
Query: 471 MTTSWDKTLKFWD 509
++ S D+T++ W+
Sbjct: 111 LSCSDDQTIRIWN 123
Score = 29.9 bits (64), Expect = 0.24
Identities = 24/120 (20%), Positives = 49/120 (40%)
Frame = +3
Query: 150 DDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDD 329
D V + F P ++G D +V W + S K + MD V +H +
Sbjct: 53 DGPVRGIAFHPTQ----PLFVSGGDDYKVNVWNYK-SRKLLFSLCGHMDY-VRVCTFHHE 106
Query: 330 GTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
+ S D++++ W+ + + + + C P+ +++ S D+T++ WD
Sbjct: 107 YPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFH-PSEDLIVSASLDQTVRVWD 165
Score = 28.3 bits (60), Expect = 0.73
Identities = 20/76 (26%), Positives = 29/76 (38%)
Frame = +3
Query: 192 TLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVK 371
TL L AG D V+ W + S + V +H + AS DK+++
Sbjct: 223 TLPLILSAGD-DRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIR 281
Query: 372 CWDLAANQTMQVAAHD 419
WDL +Q D
Sbjct: 282 VWDLNRRTAVQTFRRD 297
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLA 386
V+ A+H + AS D++V+ WD++
Sbjct: 140 VMCAAFHPSEDLIVSASLDQTVRVWDIS 167
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 33.5 bits (73), Expect = 0.020
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +3
Query: 219 SWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD----LA 386
S D V CW++ + V +G V W+ + +S + V+ WD A
Sbjct: 342 SIDSSVHCWDLRSPRFPVNSFYDWHNGAT-QVKWNYKNPHILASSHGRLVRIWDDRYGSA 400
Query: 387 ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
T++ + + + + +A T L+T + D+T+KFW+
Sbjct: 401 PLHTIKTSENITKINGLEFNRACE-TRLLTCAMDRTVKFWN 440
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 33.1 bits (72), Expect = 0.026
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEV----ETSGKTVPKA-AQPMDGPVLDVAWHDDGTKVFMA-STDKSV 368
L++GS D + CW++ E+ +V K + V DV +H + + S D+ +
Sbjct: 200 LVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLLASVSYDQYL 259
Query: 369 KCWDL-----AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
D+ + V AH P+ + + N L T S DKT+ WD R
Sbjct: 260 HVHDIRRPDASTKPARSVHAHSGPIHSVAF-NPHNDFILATCSTDKTIALWDLR 312
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 32.7 bits (71), Expect = 0.034
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 336 KVFMASTDKSVKCWDLAANQTMQV-AAHDAPVKTCH---WIKAPNYTCLMTTSWDKTLKF 503
++F+ K +DL N+T + H PV C K + T SWD T+K
Sbjct: 57 RLFVCEASHICKLYDLEINKTCKTYKGHSGPVTCCQIESLRKDGKVRHIYTGSWDHTIKK 116
Query: 504 WDTRT 518
W+ T
Sbjct: 117 WNVST 121
Score = 30.7 bits (66), Expect = 0.14
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
+ GSWD ++ W V T G+ V D + ++G + STD S+ WD++
Sbjct: 105 IYTGSWDHTIKKWNVST-GECVETLIGHTDYVKCLLLLEEEGL-LLSGSTDASLIVWDVS 162
Query: 387 ANQT---MQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
+ + ++ H ++ + PN T + +++ W
Sbjct: 163 SQPSRLLYKLTGHSRGIECI--TRQPNTDIFWTCGSESSIRCW 203
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 309 DVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAA--HDAPVKTCHWIKAPNYTCLMTTS 482
DV DG + A D+ ++ WD + + +++ K W +Y L+++S
Sbjct: 270 DVLTLADGN-IATACRDEEIRVWDTTTGNVKDIYSGHYESVTKILQW---KSY--LISSS 323
Query: 483 WDKTLKFWD 509
D+T++ WD
Sbjct: 324 LDQTIRVWD 332
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 32.3 bits (70), Expect = 0.045
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 294 DGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQT 398
+GPVL V +F D +++CW L ANQT
Sbjct: 339 EGPVLCVCVPKATHHIFSGGHDGTIRCWSLPANQT 373
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 31.5 bits (68), Expect = 0.079
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 285 QPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAAN 392
Q DG + D+A DGT AS D +VK W L ++
Sbjct: 474 QAHDGAIWDLAVGHDGTYFATASADHTVKLWSLKSS 509
Score = 29.1 bits (62), Expect = 0.42
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 300 PVLDVAWHDDGTKVFMASTDKSVKCWDLAANQT-MQVAAHDAPVKTCHWIKAPNYTCLMT 476
PVL + D + S DK+VK W L + AH + + P+ T
Sbjct: 578 PVLSMDISYDSKLLVTCSADKNVKIWGLDFGDCHKSIFAHQDSIMEVTF--QPDTYNFFT 635
Query: 477 TSWDKTLKFWDTRT 518
S D+ +++WD ++
Sbjct: 636 CSKDREVRYWDGKS 649
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 31.5 bits (68), Expect = 0.079
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 186 SVTLHTFLIA-GSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDK 362
S+ + +IA G ++ W+ S K + D V D+ DDG + AS+D
Sbjct: 181 SLAANNNIIANGGLQKDIQLWDC-VSKKRITDLVGHTDN-VRDILISDDGRTILTASSDA 238
Query: 363 SVKCWDLAANQTM 401
++K W L A + +
Sbjct: 239 TIKLWSLRAQKCL 251
Score = 30.3 bits (65), Expect = 0.18
Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPM------DGPVLDVAWHDDGTKVFMASTDKSV 368
L +G D Q+ W++ G KA+QP+ V D+A D V S+D +V
Sbjct: 47 LYSGGRDGQLFGWDI---GYDYGKASQPLAKIQAHSAWVNDIALTHDSEGVISCSSDSTV 103
Query: 369 KCWD---LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
K W L A+ + H VK K + + DK + WD
Sbjct: 104 KLWKPHVLNASCLSTIGEHTDYVKRVSIPKYSKSPLVASGGLDKRIIVWD 153
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 31.5 bits (68), Expect = 0.079
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 294 DGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVA--AHDAPVKTCHWIKAPNYTC 467
+G D+ + DG + S D++++ W + ++ + H A V C ++ PN
Sbjct: 194 EGACFDLKFSSDGRYLCSVSEDRTLRLWSIESSPFLIATGFGHSARVWRCVFL--PNKE- 250
Query: 468 LMTTSWDKTLKFW 506
+ T S D TL+ W
Sbjct: 251 IATVSEDLTLRLW 263
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 30.7 bits (66), Expect = 0.14
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQ-VAAHDAPVKTCHWIKAPNYTCLMTT 479
V VA+ DG + D+ ++ WD+A + + + H+ + + + K + L++
Sbjct: 337 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSK--DGKTLVSG 394
Query: 480 SWDKTLKFWD 509
S D+T+ WD
Sbjct: 395 SGDRTVCLWD 404
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 30.3 bits (65), Expect = 0.18
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +3
Query: 219 SWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAW-HDD-GTKVFMASTDKSVKCWDLAA- 389
S D ++ + +E + +T+ + + GPV + W H GT + AS D V W
Sbjct: 28 SSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWRETGG 87
Query: 390 --NQTMQVAAHDAPVKTCHW 443
++ M AH A V W
Sbjct: 88 VWSELMDHTAHQASVNAVSW 107
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 30.3 bits (65), Expect = 0.18
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFM-ASTDKSVKCWDL 383
+I GSWD R W + K V K Q VL + G +F+ S DK +K W+
Sbjct: 112 IITGSWDSTARVWALGQC-KYVLKGHQSSVWAVLAL-----GEDIFITGSADKLIKIWN- 164
Query: 384 AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
+ AH+ V++ I +C S D +K W
Sbjct: 165 GEKLVKSILAHNDCVRSLCQIPGGFASC----SNDGVIKLW 201
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 29.9 bits (64), Expect = 0.24
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +3
Query: 321 HDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLK 500
H GT + ASTDK+VK WD+A + + +C I+ + + T S D T++
Sbjct: 342 HPFGT-LATASTDKTVKVWDMAGVVYLGSLKGHSDYVSCLAIQD---SFIATGSMDTTVR 397
Query: 501 FWD 509
W+
Sbjct: 398 LWN 400
Score = 25.4 bits (53), Expect = 5.2
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
L +GS+D VR W++ + P PM+ V + + ++ +AS + +V+ +D
Sbjct: 549 LYSGSYDNSVRIWDLRSGS---PINIIPMEKKVNSLRLYQG--RLAVASDEPNVRIFDTV 603
Query: 387 ANQ 395
+N+
Sbjct: 604 SNR 606
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 29.9 bits (64), Expect = 0.24
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 297 GPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
GPV D+A + DG + A D +K WDL
Sbjct: 266 GPVRDLAVNRDGRYMVTAGADSLLKVWDL 294
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 29.1 bits (62), Expect = 0.42
Identities = 18/96 (18%), Positives = 37/96 (38%)
Frame = +3
Query: 123 KDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP 302
KD +P + + P L+ +D +R ++++ + +
Sbjct: 208 KDANFQAPSHSGIRCMSIHP----YFPLLLTCGFDRTLRIYQLDGKVNPLVTSLHLRSSA 263
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVA 410
+ +H DG +V A K + WDL + Q +V+
Sbjct: 264 LQTALFHPDGKRVIAAGRRKYMYIWDLESAQVQKVS 299
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 29.1 bits (62), Expect = 0.42
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 294 DGPVLDVAWHDDGTKVFMASTD-KSVKCWDLAANQTMQVA--AHDAPVKTCHWIKAPNYT 464
DG VL ++ DGT + +S + WDL+ + V AH + ++
Sbjct: 245 DGQVLSCSFRTDGTPILASSNPIGDLSFWDLSKRRIQNVTYNAHFGSLPKIQFLN--GQP 302
Query: 465 CLMTTSWDKTLKFW 506
L+T D +LK W
Sbjct: 303 ILVTAGPDNSLKEW 316
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 28.7 bits (61), Expect = 0.56
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +3
Query: 285 QPMDGPVLDVAWHDDGTK-VFMASTDKSVKCWDLAANQTMQVAAHDAPVK---TCHWIKA 452
Q DGP+ ++ + V STD+ VK W+ + + V + D V TC +
Sbjct: 380 QAHDGPISCLSVNPSVPSFVATGSTDRVVKLWNTSDSSPKMVVSRDLDVGRVFTCSFTTD 439
Query: 453 PNYTCLMTTSWDK-TLKFWDTRT 518
+ + S K ++ WDT T
Sbjct: 440 ESTAFHLAASGSKGVVRVWDTAT 462
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.3 bits (60), Expect = 0.73
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 270 VPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQ-VAAHDAPVKTCHWI 446
+ + + P+ G L D K+ +++ + +D ++ + H+ V T ++
Sbjct: 396 IKRCSFPIHGVRLITKLQFDDDKIIVSTCSPRINIYDTKTGVLIRSLEEHEGDVWTFEYV 455
Query: 447 KAPNYTCLMTTSWDKTLKFWDTRT 518
L+T S D+T++ WD RT
Sbjct: 456 G----DTLVTGSTDRTVRVWDLRT 475
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 330 GTKVFMASTDKSVKCWDLAANQTMQV 407
G + STD++V+ WDL + QV
Sbjct: 456 GDTLVTGSTDRTVRVWDLRTGECKQV 481
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 28.3 bits (60), Expect = 0.73
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 279 AAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAA 389
A P VL +WH +G + D + K WD+ A
Sbjct: 295 AKLPHSDSVLTGSWHPNGNILATGGQDTTAKVWDIRA 331
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 0.73
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +3
Query: 285 QPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD---LAANQTMQVAAHD-APVKTCHWIKA 452
Q GP+ + W+ G+++ +S+ SV W+ L T ++ V+ W
Sbjct: 21 QGQQGPIRSLGWNLSGSRLASSSSSGSVLVWNSDRLDFKFTTELGNRGYGLVEQLVW-DP 79
Query: 453 PNYTCLMTTSWDKTLKFWDTRTA 521
+ LM K ++FWD R+A
Sbjct: 80 THSDRLMAVYAGKMIRFWDFRSA 102
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 27.9 bits (59), Expect = 0.97
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVF-MASTDKSVKCWDL 383
++ GSWD ++ W + +V + +L VA H + S+D K WD
Sbjct: 119 VVTGSWDGTIKLW-LGNLPNSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDF 177
Query: 384 AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
++ + +W K+ N+ + T + + +D
Sbjct: 178 RSSDKFMSIEIPNQITCMNWSKS-NHRMVYTADNNNLVYCYD 218
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 153 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVE 254
D V+++ F P F ++GS DC++R W ++
Sbjct: 350 DFVTSIAFHPKD---DRFFLSGSLDCKLRLWSIK 380
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 27.1 bits (57), Expect = 1.7
Identities = 20/111 (18%), Positives = 47/111 (42%), Gaps = 13/111 (11%)
Frame = +3
Query: 192 TLHTFLIAGSWDCQVRCWEVETSGK------------TVPKAAQPMDGPVLDVAWHDDGT 335
T+H +++G + + W+++ + VP G + D+ W
Sbjct: 58 TIHQLMVSGGANSSINVWDLQNIDQKEDEDLILDTLNAVPARTSHKFG-ITDLHWFPFDN 116
Query: 336 KVFMAST-DKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSW 485
+F +S+ D ++K WD++ Q + + + W ++ CL+ T++
Sbjct: 117 GIFTSSSFDHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIASH-CLIATAY 166
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 411 AHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
+H + HW N ++S+D TLK WD T
Sbjct: 101 SHKFGITDLHWFPFDN-GIFTSSSFDHTLKVWDVST 135
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 26.6 bits (56), Expect = 2.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 309 DVAWHDDGTKVFMASTD 359
D+AW+DDG + M S D
Sbjct: 424 DIAWNDDGNVLLMTSID 440
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 339 VFMASTDKSVKCWDLAANQTMQVAAH--DAPVKTCHWIKAPNYTCLMTT-SWDKTLKFWD 509
+ +S D + + W L A + H + + + ++ + T L+ T S D+TL+ WD
Sbjct: 316 IISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWD 375
Query: 510 TRT 518
T
Sbjct: 376 ITT 378
>SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 408
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 99 STGSNNPNKDVEVSSPPDDTVSALE 173
S S +P + VS PP +T SALE
Sbjct: 19 SNDSEHPFEHTRVSIPPSETRSALE 43
>SPAC4F10.18 |||WD repeat protein, human NUP37
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 300 PVLDVAWHDDGTKVFMASTDKSV 368
P++D WH DG+ + +A T+ SV
Sbjct: 359 PIVDFCWHQDGSHLAIA-TEGSV 380
>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 263 PRSFHFPTSHLAVPAASDQEGVQSDGGRRELE 168
P F P+S P+ASD E V DG EL+
Sbjct: 4 PLRFSTPSSS---PSASDNESVHDDGPTTELD 32
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 258 SGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQ-VAAHDAPVKT 434
SGK V V V W GT++ + + + WD+ + ++++ + H V
Sbjct: 154 SGKVVQLHDFGATNHVTSVLWTGKGTQLAVGTDSGVIYIWDIESTKSVRSLKGHSERVAA 213
Query: 435 CHW 443
W
Sbjct: 214 LAW 216
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 2 PHEVFVFSNKFVRVNCWFVG 61
P E+F+F+ KF V C ++G
Sbjct: 234 PEELFIFTTKFSIVLCAYMG 253
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 25.0 bits (52), Expect = 6.8
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +3
Query: 297 GPVLDVAWHDDGTKVFMASTDKSVKCWD 380
G + ++W D ++ +S S K WD
Sbjct: 232 GSIFSISWSPDSSQFVTSSAGYSCKIWD 259
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 378 PNTSHFCLLKP*KPSSHHHARRHLGPVHP 292
PNTS L P K ++ + H P+HP
Sbjct: 53 PNTSFTSLFGPRKQTTSSPSFSHAAPLHP 81
>SPCC1020.09 |||WD repeat protein, human WDR79
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 399
Score = 24.6 bits (51), Expect = 9.0
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +3
Query: 318 WHDDGTKVFMASTDKSVKCWDL 383
W DG+ + + D+ + CW++
Sbjct: 54 WSPDGSTILSLTEDQCLNCWNV 75
>SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 300
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 221 LGLPSEMLGSGNFGENSA*GCTAYGWTGPRCRL 319
LG+ S MLG G N A G Y GP R+
Sbjct: 128 LGVASVMLGFLAHGMNKAYGWVIYKKIGPELRM 160
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = +3
Query: 462 TCLMTTSWDKTL-KFW 506
TCL T+ WD+TL K W
Sbjct: 153 TCLATSIWDETLFKAW 168
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 399 MQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
++ H+A V + W K L+T+S D+T++ W ++
Sbjct: 249 LECVGHNAEVLSISWSKND---FLLTSSADRTVRLWHPKS 285
>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 278
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 106 PVLI*LPNIVLFYKPTNKPTIYSYKFV 26
PV I PNI L+ KPT P I S+ V
Sbjct: 61 PVCIYPPNIYLYAKPT-MPIIQSFDVV 86
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = +3
Query: 408 AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
+ D + + W+ + + S + LK WD RT
Sbjct: 284 SGRDCSITSATWLPQSTSQVISSCSANSALKLWDLRT 320
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 414 HDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
H APV +C + L + SWDK + +WD T
Sbjct: 231 HTAPV-SCLALHGSEKKVL-SGSWDKMVYYWDLNT 263
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,257,341
Number of Sequences: 5004
Number of extensions: 47641
Number of successful extensions: 332
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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