Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305B02f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   3.6  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   4.7  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   4.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   6.2  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   6.2  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   6.2  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   8.2  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -2

Query: 505 QNFRVLSQEVVMRHV*LGALIQWQVFTGASCAATCIVWLAAK 380
           Q  +   +E +  +  + A+  WQ+F G   A  C+   AAK
Sbjct: 320 QELKAALKEELQVNAGVTAVSMWQLFDGMKRARLCLPTKAAK 361


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 382 KSQHFTLLSVEAIKTFVPSSCQATSRT 302
           +S+H+    +  +  F PSS Q++S T
Sbjct: 649 RSKHYISAEMRTVLIFAPSSNQSSSST 675


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -1

Query: 275 RHCFPRSFHFPTSHLAVPAASDQEGVQSDGGRRE-LEGR-HGVIGRRGNLHVLVGVV 111
           R C   S + PTS      +   E   S GG+RE L+ +  G + +       VGVV
Sbjct: 215 RDCPMESNNTPTSTTMRDYSRKNENCSSSGGQRESLKPKPKGKVAKSSEFSFTVGVV 271


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 414 APLPASFGWLLSPNTSHFCLLKP*KPSS 331
           AP PA++G + SP+++   +  P   SS
Sbjct: 268 APSPATYGDIASPSSASSAMTTPATTSS 295


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 414 APLPASFGWLLSPNTSHFCLLKP*KPSS 331
           AP PA++G + SP+++   +  P   SS
Sbjct: 268 APSPATYGDIASPSSASSAMTTPATTSS 295


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 182 RRELEGRHGVIGRRGNLHVL 123
           +R L+GR  V GR+G  HV+
Sbjct: 74  QRTLDGRLQVAGRKGFPHVI 93


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = -1

Query: 263 PRSFHFPTSHLAVPAASDQEGVQSDGGRRELEGRHGVIGRRGN 135
           PR +         P    + G+  + G   L G  G+ GR+G+
Sbjct: 416 PRGYDGEKGFKGEPGRIGERGLMGEKGDMGLTGPVGLSGRKGD 458


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,082
Number of Sequences: 2352
Number of extensions: 13459
Number of successful extensions: 38
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)