Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305B02f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 134 3e-32
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 126 1e-29
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 65 2e-11
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 63 1e-10
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 58 4e-09
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 58 5e-09
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 58 5e-09
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 58 5e-09
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 54 4e-08
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 54 6e-08
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 54 8e-08
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 53 1e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 53 1e-07
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 53 1e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 52 2e-07
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 52 3e-07
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 52 3e-07
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 52 3e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 50 9e-07
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 50 1e-06
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 48 4e-06
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 48 5e-06
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 48 5e-06
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 48 5e-06
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 47 7e-06
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 47 7e-06
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 46 7e-06
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 47 9e-06
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 45 3e-05
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 43 1e-04
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 43 1e-04
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 43 1e-04
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 42 2e-04
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 42 3e-04
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 42 3e-04
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 42 3e-04
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 42 3e-04
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 42 3e-04
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 41 4e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 41 6e-04
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 40 0.001
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 40 0.001
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 40 0.001
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 39 0.002
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 39 0.002
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 39 0.002
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 39 0.002
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 39 0.002
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 39 0.002
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 39 0.002
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 39 0.002
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 39 0.002
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 39 0.002
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 38 0.003
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 38 0.004
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 37 0.007
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 37 0.009
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 37 0.009
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 37 0.009
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 36 0.012
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 36 0.012
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 36 0.012
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 36 0.017
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 36 0.017
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 36 0.017
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 36 0.022
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 35 0.029
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 35 0.029
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 35 0.029
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 35 0.029
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 35 0.029
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 35 0.038
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 35 0.038
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 35 0.038
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 35 0.038
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 35 0.038
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 35 0.038
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 35 0.038
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 34 0.050
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 34 0.050
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 34 0.050
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 34 0.050
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 34 0.067
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 34 0.067
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 33 0.088
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 33 0.088
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 33 0.088
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 33 0.088
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 33 0.12
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 33 0.12
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 33 0.12
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 33 0.12
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 33 0.12
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 33 0.12
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 33 0.15
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 32 0.20
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 32 0.20
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 32 0.20
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 32 0.20
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 32 0.20
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 32 0.20
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 32 0.20
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 32 0.20
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 32 0.27
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 32 0.27
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 32 0.27
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 32 0.27
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 31 0.36
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 31 0.36
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 31 0.47
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 31 0.47
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 31 0.47
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 31 0.62
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 30 0.82
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 30 0.82
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 30 0.82
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 30 0.82
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 30 0.82
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 30 0.82
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 30 1.1
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 30 1.1
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 29 1.4
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 29 1.4
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 29 1.9
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 29 1.9
At2g43500.1 68415.m05405 RWP-RK domain-containing protein low si... 29 1.9
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 29 2.5
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 29 2.5
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 29 2.5
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 29 2.5
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 29 2.5
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 29 2.5
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 28 3.3
At4g12350.1 68417.m01953 transcription factor, putative (MYB42) ... 28 3.3
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 28 3.3
At1g79090.2 68414.m09222 expressed protein 11408 (cDNA not full... 28 3.3
At1g79090.1 68414.m09221 expressed protein 11408 (cDNA not full... 28 3.3
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 28 4.4
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 28 4.4
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 28 4.4
At5g12150.1 68418.m01426 pleckstrin homology (PH) domain-contain... 27 5.8
At4g38670.1 68417.m05475 pathogenesis-related thaumatin family p... 27 5.8
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 27 5.8
At3g08840.3 68416.m01027 D-alanine--D-alanine ligase family simi... 27 5.8
At3g08840.2 68416.m01026 D-alanine--D-alanine ligase family simi... 27 5.8
At5g28600.1 68418.m03490 hypothetical protein 27 7.7
At4g20910.1 68417.m03031 double-stranded RNA binding protein-rel... 27 7.7
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 27 7.7
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 27 7.7
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 27 7.7
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 27 7.7
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 134 bits (324), Expect = 3e-32
Identities = 70/148 (47%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Frame = +3
Query: 84 FGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSG 263
FG+ +T ++NPNK EV+ P D++S+L FSP + L+A SWD QVRCWE+ SG
Sbjct: 4 FGAP-ATANSNPNKSYEVTPSPADSISSLSFSPRA----DILVATSWDNQVRCWEISRSG 58
Query: 264 KTV---PKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD-LAANQTMQVAAHDAPVK 431
++ PKA+ D PVL AW DDGT VF DK K W L+ Q + VA H+ P+
Sbjct: 59 ASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIA 118
Query: 432 TCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
WI P L T SWDKTLK+WDTR
Sbjct: 119 AMAWI--PGMNLLATGSWDKTLKYWDTR 144
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 126 bits (303), Expect = 1e-29
Identities = 64/142 (45%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Frame = +3
Query: 87 GSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGK 266
G + ++ +NNPN E++ P D++S+L FSP + L+A SWDCQVRCWE+ S
Sbjct: 5 GDKATSSTNNPNNSYEITPPATDSISSLSFSPKA----DILVATSWDCQVRCWEITRSDG 60
Query: 267 TV---PKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAAN-QTMQVAAHDAPVKT 434
++ PK + D PVL AW DDGT VF DK K W L + Q VA HDAP
Sbjct: 61 SIASEPKVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQ 120
Query: 435 CHWIKAPNYTCLMTTSWDKTLK 500
WI P L+T SWDKTLK
Sbjct: 121 IAWI--PGMNLLVTGSWDKTLK 140
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 65.3 bits (152), Expect = 2e-11
Identities = 43/130 (33%), Positives = 62/130 (47%)
Frame = +3
Query: 132 EVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLD 311
E+S+PP D +S L FS S L+ SWD VR ++ + + G VLD
Sbjct: 10 ELSNPPSDGISNLRFSNNS----DHLLVSSWDKSVRLYDANGD---LMRGEFKHGGAVLD 62
Query: 312 VAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDK 491
+HDD + F D V+ D A + + H+ PV+ + A ++T SWDK
Sbjct: 63 CCFHDDSSG-FSVCADTKVRRIDFNAGKEDVLGTHEKPVRCVEYSYAAGQ--VITGSWDK 119
Query: 492 TLKFWDTRTA 521
T+K WD R A
Sbjct: 120 TIKCWDPRGA 129
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 62.9 bits (146), Expect = 1e-10
Identities = 45/135 (33%), Positives = 64/135 (47%)
Frame = +3
Query: 117 PNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD 296
P+ E+S+PP D +S L FS S L+ SWD +VR ++V T+ K
Sbjct: 6 PSAGRELSNPPSDGISNLRFSNNS----DHLLVSSWDKRVRLYDVSTNSL---KGEFLHG 58
Query: 297 GPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMT 476
G VLD +HDD + F D V+ + + HD V+ + A ++T
Sbjct: 59 GAVLDCCFHDDFSG-FSVGADYKVRRIVFNVGKEDILGTHDKAVRCVEYSYAAGQ--VIT 115
Query: 477 TSWDKTLKFWDTRTA 521
SWDKT+K WD R A
Sbjct: 116 GSWDKTVKCWDPRGA 130
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 58.0 bits (134), Expect = 4e-09
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
F ++GSWD ++R W++ T T D VL VA+ D ++ AS D+++K W+
Sbjct: 77 FALSGSWDGELRLWDLATGESTRRFVGHTKD--VLSVAFSTDNRQIVSASRDRTIKLWNT 134
Query: 384 AANQTMQVAAHDAPVKTCHWIK-APN--YTCLMTTSWDKTLKFWD 509
++ D + ++ +PN +++ SWDKT+K W+
Sbjct: 135 LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Score = 39.5 bits (88), Expect = 0.001
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP---VLDVAWHDDGTKVFMASTDKSVKCW 377
++ S D + W++ K+ A + M G V DV DG S D ++ W
Sbjct: 31 IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 90
Query: 378 DLAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 512
DLA + T + H V + + + + +++ S D+T+K W+T
Sbjct: 91 DLATGESTRRFVGHTKDVLSVAF--STDNRQIVSASRDRTIKLWNT 134
Score = 34.3 bits (75), Expect = 0.050
Identities = 27/117 (23%), Positives = 48/117 (41%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 338
VS + FSP TL +++ SWD V+ W ++ A G + VA DG+
Sbjct: 152 VSCVRFSPN--TLVPTIVSASWDKTVKVWNLQNCKLRNTLAGH--SGYLNTVAVSPDGSL 207
Query: 339 VFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
D + WDLA + + + + + + + C T + +++ WD
Sbjct: 208 CASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAAT---ENSIRIWD 261
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = +3
Query: 324 DDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIK----APNYTCLMTTSWDK 491
D+ + +S DKS+ W L A H+++ + + ++ SWD
Sbjct: 26 DNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDG 85
Query: 492 TLKFWDTRT 518
L+ WD T
Sbjct: 86 ELRLWDLAT 94
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 57.6 bits (133), Expect = 5e-09
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
F ++GSWD ++R W++ T T D VL VA+ D ++ AS D+++K W+
Sbjct: 77 FALSGSWDGELRLWDLATGETTRRFVGHTKD--VLSVAFSTDNRQIVSASRDRTIKLWNT 134
Query: 384 AANQTMQVAAHDAPVKTCHWIK-APN--YTCLMTTSWDKTLKFWD 509
++ D + ++ +PN +++ SWDKT+K W+
Sbjct: 135 LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Score = 37.9 bits (84), Expect = 0.004
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP---VLDVAWHDDGTKVFMASTDKSVKCW 377
++ S D + W++ K+ A + + G V DV DG S D ++ W
Sbjct: 31 IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 378 DLAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 512
DLA + T + H V + + + + +++ S D+T+K W+T
Sbjct: 91 DLATGETTRRFVGHTKDVLSVAF--STDNRQIVSASRDRTIKLWNT 134
Score = 33.9 bits (74), Expect = 0.067
Identities = 26/117 (22%), Positives = 49/117 (41%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 338
VS + FSP TL +++ SWD V+ W ++ + + G + VA DG+
Sbjct: 152 VSCVRFSPN--TLVPTIVSASWDKTVKVWNLQNC--KLRNSLVGHSGYLNTVAVSPDGSL 207
Query: 339 VFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
D + WDLA + + + + + + + C T + +++ WD
Sbjct: 208 CASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAAT---ENSIRIWD 261
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +3
Query: 324 DDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIK----APNYTCLMTTSWDK 491
D+ + AS DKS+ W L + A H+++ + + ++ SWD
Sbjct: 26 DNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 85
Query: 492 TLKFWDTRT 518
L+ WD T
Sbjct: 86 ELRLWDLAT 94
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 57.6 bits (133), Expect = 5e-09
Identities = 38/129 (29%), Positives = 68/129 (52%)
Frame = +3
Query: 129 VEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVL 308
+E +P +D VS L FSP S L + SWD +R ++VE+S ++ +Q +L
Sbjct: 6 LEFENPIEDAVSRLRFSPQSNNL----LVASWDSYLRLYDVESSSLSLELNSQ---AALL 58
Query: 309 DVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWD 488
D + ++ T F + +D ++ +DL A + HD + T + + +++T +D
Sbjct: 59 DCCFENESTS-FTSGSDGFIRRYDLNAGTVDTIGRHD-DISTSI-VYSYEKGEVISTGFD 115
Query: 489 KTLKFWDTR 515
+ +KFWDTR
Sbjct: 116 EKIKFWDTR 124
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 57.6 bits (133), Expect = 5e-09
Identities = 38/129 (29%), Positives = 68/129 (52%)
Frame = +3
Query: 129 VEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVL 308
+E +P +D VS L FSP S L + SWD +R ++VE+S ++ +Q +L
Sbjct: 6 LEFENPIEDAVSRLRFSPQSNNL----LVASWDSYLRLYDVESSSLSLELNSQ---AALL 58
Query: 309 DVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWD 488
D + ++ T F + +D ++ +DL A + HD + T + + +++T +D
Sbjct: 59 DCCFENESTS-FTSGSDGFIRRYDLNAGTVDTIGRHD-DISTSI-VYSYEKGEVISTGFD 115
Query: 489 KTLKFWDTR 515
+ +KFWDTR
Sbjct: 116 EKIKFWDTR 124
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 54.4 bits (125), Expect = 4e-08
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 338
V +++++P T + SWD V+ W ++ + + V W+
Sbjct: 109 VQSVDYNP---TRRDSFLTSSWDDTVKLWAMDRPASV--RTFKEHAYCVYQAVWNPKHGD 163
Query: 339 VFM-ASTDKSVKCWDLAA-NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 512
VF AS D +++ WD+ TM + AHD + +C W K + L T+S DKT+K WD
Sbjct: 164 VFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDD-CILATSSVDKTVKVWDV 222
Query: 513 RT 518
R+
Sbjct: 223 RS 224
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 54.0 bits (124), Expect = 6e-08
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 338
V ++F+P T + +GS D ++ W V K + +LD+ W DG++
Sbjct: 56 VYTMKFNPAG----TLIASGSHDREIFLWRVHGDCKNF-MVLKGHKNAILDLHWTSDGSQ 110
Query: 339 VFMASTDKSVKCWDL-AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
+ AS DK+V+ WD+ Q ++A H + V +C + +++ S D T K WD R
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRR-GPPLIISGSDDGTAKLWDMR 169
Score = 43.6 bits (98), Expect = 8e-05
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSG--KTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
+I+GS D + W++ G +T P Q + V++ D K+F D VK WD
Sbjct: 154 IISGSDDGTAKLWDMRQRGAIQTFPDKYQ-----ITAVSFSDAADKIFTGGVDNDVKVWD 208
Query: 381 LAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
L + TM + H + +P+ + L+T D L WD R
Sbjct: 209 LRKGEATMTLEGHQDTITGMS--LSPDGSYLLTNGMDNKLCVWDMR 252
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Frame = +3
Query: 153 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSG------KTVPKAAQPMDGPVLDV 314
DT++ + SP ++L+ D ++ W++ K + +L
Sbjct: 223 DTITGMSLSPDG----SYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKC 278
Query: 315 AWHDDGTKVFMASTDKSVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDK 491
+W DGTKV S+D+ V WD + +T+ ++ H V C + P + + S DK
Sbjct: 279 SWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNEC--VFHPTEPIIGSCSSDK 336
Query: 492 TL 497
+
Sbjct: 337 NI 338
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAAN--QTMQVAAHDAPVKTCHWIKAPNYTCLMT 476
V + ++ GT + S D+ + W + + M + H + HW + +++
Sbjct: 56 VYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ--IVS 113
Query: 477 TSWDKTLKFWDTRT 518
S DKT++ WD T
Sbjct: 114 ASPDKTVRAWDVET 127
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 53.6 bits (123), Expect = 8e-08
Identities = 36/131 (27%), Positives = 63/131 (48%)
Frame = +3
Query: 108 SNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQ 287
+ +P + ++V + V + F+PPS +++GS+D +R WEV+T GK V + +
Sbjct: 114 ARSPYECLKVLRGHTNFVFCVNFNPPS----NLIVSGSFDETIRIWEVKT-GKCV-RMIK 167
Query: 288 PMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTC 467
P+ V ++ DG+ + AS D S K WD ++ D +PN
Sbjct: 168 AHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKF 227
Query: 468 LMTTSWDKTLK 500
++ + D TLK
Sbjct: 228 ILVATLDSTLK 238
Score = 33.5 bits (73), Expect = 0.088
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDL-AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTT 479
+ D+AW D AS D +++ WD + + ++V C P+ +++
Sbjct: 88 ISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPS-NLIVSG 146
Query: 480 SWDKTLKFWDTRT 518
S+D+T++ W+ +T
Sbjct: 147 SFDETIRIWEVKT 159
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 53.2 bits (122), Expect = 1e-07
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Frame = +3
Query: 162 SALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKV 341
SA+EF P FL +GS D +R W+ G + + + DG V
Sbjct: 53 SAVEFHP----FGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRG--ISTIEFSPDGRWV 106
Query: 342 FMASTDKSVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
D VK WDL A + + + H+ P+++ + P L T S D+T+KFWD T
Sbjct: 107 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF--HPLEFLLATGSADRTVKFWDLET 164
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 52.8 bits (121), Expect = 1e-07
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = +3
Query: 162 SALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKV 341
SA+EF P FL +GS D ++ W++ G + + + + + DG V
Sbjct: 104 SAVEFHP----FGEFLASGSSDANLKIWDIRKKGCI--QTYKGHSRGISTIRFTPDGRWV 157
Query: 342 FMASTDKSVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
D VK WDL A + + + H+ P+++ + P L T S D+T+KFWD T
Sbjct: 158 VSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDF--HPLEFLLATGSADRTVKFWDLET 215
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 52.8 bits (121), Expect = 1e-07
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
F I+GS DC V+ W+ G + + G V ++ D K+ S D SV WD
Sbjct: 869 FFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAIS--SDRGKIVSGSDDLSVIVWDK 926
Query: 384 AANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
Q + ++ HD+ V +C +K + ++T + D T+K WD RT
Sbjct: 927 QTTQLLEELKGHDSQV-SC--VKMLSGERVLTAAHDGTVKMWDVRT 969
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 52.0 bits (119), Expect = 2e-07
Identities = 31/106 (29%), Positives = 49/106 (46%)
Frame = +3
Query: 198 HTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCW 377
HT++ + D QV+CW++E K + + G V +A H V D + W
Sbjct: 224 HTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLHG-VYCLALHPTLDVVLTGGRDSVCRVW 281
Query: 378 DLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
D+ + V HD+ V + + P ++T S D T+KFWD R
Sbjct: 282 DIRTKMQIFVLPHDSDVFSV--LARPTDPQVITGSHDSTIKFWDLR 325
Score = 42.7 bits (96), Expect = 1e-04
Identities = 29/101 (28%), Positives = 43/101 (42%)
Frame = +3
Query: 216 GSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQ 395
GS D ++ W+V T + G V +A + T +F A DK VKCWDL N+
Sbjct: 188 GSADRTIKIWDVATGVLKLTLTGHI--GQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 245
Query: 396 TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
++ C + P ++T D + WD RT
Sbjct: 246 VIRSYHGHLHGVYCLALH-PTLDVVLTGGRDSVCRVWDIRT 285
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 51.6 bits (118), Expect = 3e-07
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 9/159 (5%)
Frame = +3
Query: 72 KSTMFGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTL-----HTFLIAGSWDCQV 236
+ST G +S N E S + V++L V+ H + + SWD V
Sbjct: 236 ESTSEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSV 295
Query: 237 RCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQT----MQ 404
R W+VET GK +DV + + +D ++ WD T Q
Sbjct: 296 RRWDVET-GKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPGTSAPVFQ 353
Query: 405 VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTA 521
++H + + C W K+ ++ L++ S+D + WD RTA
Sbjct: 354 FSSHSSWISACKWHKS-SWFHLLSASYDGKIMLWDLRTA 391
Score = 34.7 bits (76), Expect = 0.038
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
Frame = +3
Query: 117 PNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD 296
P K+ E S DD VSA+ S P F++ G +D R W S + +
Sbjct: 100 PRKEEEPSLH-DDWVSAVNGSSPR-----FILTGCYDGLGRVWSSAGSCSHILEGHSGAI 153
Query: 297 GPVLDVAWHDDGT-KVFMASTDKSVKCWDL----AANQTMQVAA------HDAPVKTCHW 443
V V +D T V AS D++++ + + + T +V A H A V++
Sbjct: 154 SSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSA 213
Query: 444 IKAPNYTCLMTTSWDKTLKFWDT 512
K+ N C ++SWD T+ W+T
Sbjct: 214 QKSGNMVC--SSSWDCTINLWNT 234
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 51.6 bits (118), Expect = 3e-07
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 9/159 (5%)
Frame = +3
Query: 72 KSTMFGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTL-----HTFLIAGSWDCQV 236
+ST G +S N E S + V++L V+ H + + SWD V
Sbjct: 236 ESTSEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSV 295
Query: 237 RCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQT----MQ 404
R W+VET GK +DV + + +D ++ WD T Q
Sbjct: 296 RRWDVET-GKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPGTSAPVFQ 353
Query: 405 VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTA 521
++H + + C W K+ ++ L++ S+D + WD RTA
Sbjct: 354 FSSHSSWISACKWHKS-SWFHLLSASYDGKIMLWDLRTA 391
Score = 34.7 bits (76), Expect = 0.038
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
Frame = +3
Query: 117 PNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD 296
P K+ E S DD VSA+ S P F++ G +D R W S + +
Sbjct: 100 PRKEEEPSLH-DDWVSAVNGSSPR-----FILTGCYDGLGRVWSSAGSCSHILEGHSGAI 153
Query: 297 GPVLDVAWHDDGT-KVFMASTDKSVKCWDL----AANQTMQVAA------HDAPVKTCHW 443
V V +D T V AS D++++ + + + T +V A H A V++
Sbjct: 154 SSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSA 213
Query: 444 IKAPNYTCLMTTSWDKTLKFWDT 512
K+ N C ++SWD T+ W+T
Sbjct: 214 QKSGNMVC--SSSWDCTINLWNT 234
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 51.6 bits (118), Expect = 3e-07
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Frame = +3
Query: 117 PNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD 296
P + V S VSA+ F P H L AG DC+V+ W+V SGK + +
Sbjct: 271 PKRLVHTWSGHTKGVSAIRFFPKQG--HLLLSAGM-DCKVKIWDVYNSGKCM-RTYMGHA 326
Query: 297 GPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKA----PNYT 464
V D+ + +DG+K A DK++K WD +T QV + + K + +K
Sbjct: 327 KAVRDICFSNDGSKFLTAGYDKNIKYWD---TETGQVISTFSTGKIPYVVKLNPDDDKQN 383
Query: 465 CLMTTSWDKTLKFWDTRT 518
L+ DK + WD T
Sbjct: 384 ILLAGMSDKKIVQWDINT 401
Score = 33.9 bits (74), Expect = 0.067
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +3
Query: 183 PSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDK 362
P L+AG D ++ W++ T G+ + Q + G V + + D+ + +S DK
Sbjct: 377 PDDDKQNILLAGMSDKKIVQWDINT-GEVTQEYDQHL-GAVNTITFVDNNRRFVTSSDDK 434
Query: 363 SVKCWDLAANQTMQVAA----HDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
S++ W+ ++ + H P + H PN L S D + + TR
Sbjct: 435 SLRVWEFGIPVVIKYISEPHMHSMPSISVH----PNGNWLAAQSLDNQILIYSTR 485
Score = 29.1 bits (62), Expect = 1.9
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Frame = +3
Query: 177 SPPSVTLH---TFLIAGSWDCQVRCWEVETSGKTVPK---AAQPMDGPVLDVAWHDDGTK 338
S PS+++H +L A S D Q+ + + K A + G V + DG
Sbjct: 457 SMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR- 515
Query: 339 VFMASTDKSVKCW--DLAANQTMQ-VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
F+ S D KCW D + + + + H+ W + + T WD +K+WD
Sbjct: 516 -FVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQ-SKVATCGWDGLIKYWD 573
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 50.0 bits (114), Expect = 9e-07
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +3
Query: 198 HTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCW 377
HT++ + D QV+CW++E K + + G V +A H + D + W
Sbjct: 230 HTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLSG-VYCLALHPTLDVLLTGGRDSVCRVW 287
Query: 378 DLAAN-QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
D+ Q ++ HD V C P ++T S D T+KFWD R
Sbjct: 288 DIRTKMQIFALSGHDNTV--CSVFTRPTDPQVVTGSHDTTIKFWDLR 332
Score = 41.5 bits (93), Expect = 3e-04
Identities = 29/101 (28%), Positives = 42/101 (41%)
Frame = +3
Query: 216 GSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQ 395
GS D ++ W+V T + V +A + T +F A DK VKCWDL N+
Sbjct: 194 GSADRTIKIWDVATGVLKLTLTGHIEQ--VRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 251
Query: 396 TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
++ C + P L+T D + WD RT
Sbjct: 252 VIRSYHGHLSGVYCLALH-PTLDVLLTGGRDSVCRVWDIRT 291
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 49.6 bits (113), Expect = 1e-06
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
F ++GSWD ++R W++ T D VL VA+ D ++ AS D+++K W+
Sbjct: 77 FALSGSWDGELRLWDLAAGVSTRRFVGHTKD--VLSVAFSLDNRQIVSASRDRTIKLWNT 134
Query: 384 AANQTMQVA----AHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
++ H V + +++ SWDKT+K W+
Sbjct: 135 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 180
Score = 38.7 bits (86), Expect = 0.002
Identities = 31/119 (26%), Positives = 48/119 (40%)
Frame = +3
Query: 153 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDG 332
D VS + FSP TL +++ SWD V+ W + S + G V VA DG
Sbjct: 151 DWVSCVRFSPN--TLQPTIVSASWDKTVKVWNL--SNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 333 TKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
+ D V WDLA + + ++ + + + C T + +K WD
Sbjct: 207 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT---EHGIKIWD 262
Score = 37.9 bits (84), Expect = 0.004
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP---VLDVAWHDDGTKVFMASTDKSVKCW 377
+++ S D + W++ K A + + G V DV DG S D ++ W
Sbjct: 31 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 378 DLAAN-QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 512
DLAA T + H V + + + + +++ S D+T+K W+T
Sbjct: 91 DLAAGVSTRRFVGHTKDVLSVAF--SLDNRQIVSASRDRTIKLWNT 134
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 48.0 bits (109), Expect = 4e-06
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
F +GS D ++ W++ G VL + DG + D VK WDL
Sbjct: 208 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFTPDGRWIVSGGEDNVVKVWDL 265
Query: 384 AANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
A + + + +H+ +++ + P+ L T S DKT+KFWD T
Sbjct: 266 TAGKLLHEFKSHEGKIQSLDF--HPHEFLLATGSADKTVKFWDLET 309
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 47.6 bits (108), Expect = 5e-06
Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 15/154 (9%)
Frame = +3
Query: 99 STGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEV-ETSGKTVP 275
S S+ PN DV + V A +SP + + L +GS D R W + E S K V
Sbjct: 248 SQTSHIPNSDVRILEGHTSEVCACAWSPSA----SLLASGSGDATARIWSIPEGSFKAVH 303
Query: 276 KA--------------AQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAA 413
+ V + W+ +GT + S D + W L ++
Sbjct: 304 TGRNINALILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGELISTLSK 363
Query: 414 HDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
H P+ + W K +Y L+T S D+T WD +
Sbjct: 364 HKGPIFSLKWNKKGDY--LLTGSVDRTAVVWDVK 395
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
T L GS D Q R W + +G+ + ++ GP+ + W+ G + S D++ WD
Sbjct: 337 TLLATGSCDGQARIWTL--NGELISTLSKHK-GPIFSLKWNKKGDYLLTGSVDRTAVVWD 393
Query: 381 LAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTA 521
+ A + Q H P W ++ T S K +TR A
Sbjct: 394 VKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPA 441
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Frame = +3
Query: 261 GKTVP-KAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTM-QVAAHDAPVKT 434
G+T P K G V V W G+ + S D + K W++ + + + H + T
Sbjct: 436 GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYT 495
Query: 435 CHW------IKAPN-YTCLMTTSWDKTLKFWD 509
W PN L + S+D T+K WD
Sbjct: 496 IRWSPTGPGTNNPNKQLTLASASFDSTVKLWD 527
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
L + S+D V+ W+ E GK + + PV +A+ +G + S DKS+ W +
Sbjct: 514 LASASFDSTVKLWDAEL-GKMLCSFNGHRE-PVYSLAFSPNGEYIASGSLDKSIHIWSIK 571
Query: 387 ANQTMQVAAHDAPVKTCHWIKAPN 458
+ ++ + + W K N
Sbjct: 572 EGKIVKTYTGNGGIFEVCWNKEGN 595
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 47.6 bits (108), Expect = 5e-06
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = +3
Query: 153 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDG 332
DT++AL SP L + Q+R W++ET K + ++ + +GPV+ +A H G
Sbjct: 61 DTLTALALSPDD----KLLFSAGHSRQIRVWDLETL-KCI-RSWKGHEGPVMGMACHASG 114
Query: 333 TKVFMASTDKSVKCWDLAAN-QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
+ A D+ V WD+ T H V + + N L++ S D T++ WD
Sbjct: 115 GLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWD 174
Score = 40.7 bits (91), Expect = 6e-04
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD---GPVLDVAWHDD 329
VS++ F P S LI+GS D VR W++ T K M+ V +A +D
Sbjct: 147 VSSILFHPDSNK--NILISGSDDATVRVWDLNAKN-TEKKCLAIMEKHFSAVTSIALSED 203
Query: 330 GTKVFMASTDKSVKCWDL 383
G +F A DK V WDL
Sbjct: 204 GLTLFSAGRDKVVNLWDL 221
Score = 28.7 bits (61), Expect = 2.5
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 9/111 (8%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEV----ETSGKTVPKAAQPM----DGPVLDVAWHDDGTKVFMAST 356
+F ++GS D ++ W + E S + + + + D + VA + + V S
Sbjct: 460 SFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSE 519
Query: 357 DKSVKCWDLA-ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
D++ W L + + H + + + C+MT S DKT+K W
Sbjct: 520 DRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQ--CVMTASGDKTVKIW 568
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 47.6 bits (108), Expect = 5e-06
Identities = 31/118 (26%), Positives = 55/118 (46%)
Frame = +3
Query: 168 LEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFM 347
+ F+P S +++GS+D VR W+V T+GK + K PV V ++ DG+ +
Sbjct: 119 VNFNPQS----NMIVSGSFDETVRIWDV-TTGKCL-KVLPAHSDPVTAVDFNRDGSLIVS 172
Query: 348 ASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTA 521
+S D + WD ++ D +PN ++ + D TL+ W+ +A
Sbjct: 173 SSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSA 230
Score = 46.4 bits (105), Expect = 1e-05
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Frame = +3
Query: 99 STGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPK 278
+T S P + + + VS+++FS L + S D +R + + T + +
Sbjct: 7 ATASFTPYVHSQTLTSHNRAVSSVKFSSDG----RLLASASADKTIRTYTINTINDPIAE 62
Query: 279 AAQPMDGP---VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIK 449
Q G + DVA+ D + AS DK++K WD+ ++ C
Sbjct: 63 PVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFN 122
Query: 450 APNYTCLMTTSWDKTLKFWDTRT 518
P +++ S+D+T++ WD T
Sbjct: 123 -PQSNMIVSGSFDETVRIWDVTT 144
Score = 30.7 bits (66), Expect = 0.62
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +3
Query: 186 SVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDG---PVLDVAWHDDGTKVFMAST 356
SVT +++GS D V WE+ + K Q ++G V++VA H + S
Sbjct: 251 SVTNGKRIVSGSEDNCVHMWELNSK-----KLLQKLEGHTETVMNVACHPTENLIASGSL 305
Query: 357 DKSVKCW 377
DK+V+ W
Sbjct: 306 DKTVRIW 312
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 47.2 bits (107), Expect = 7e-06
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
F +GS D ++ W++ G VL + DG V D VK WDL
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFTPDGRWVVSGGEDNIVKVWDL 172
Query: 384 AANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
A + + + +H+ +++ + P+ L T S D+T+KFWD T
Sbjct: 173 TAGKLLTEFKSHEGQIQSLDF--HPHEFLLATGSADRTVKFWDLET 216
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 47.2 bits (107), Expect = 7e-06
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
F +GS D ++ W++ G VL + DG V D VK WDL
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFTPDGRWVVSGGEDNIVKVWDL 172
Query: 384 AANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
A + + + +H+ +++ + P+ L T S D+T+KFWD T
Sbjct: 173 TAGKLLTEFKSHEGQIQSLDF--HPHEFLLATGSADRTVKFWDLET 216
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 45.6 bits (103), Expect(2) = 7e-06
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 321 HDDGTK-VFMASTDKSVKCWDLAANQTMQVAAH-DAPVKTCHWIKAPNYTCLMTTSWDKT 494
H G K ++ S D SV +DL + + V H +PV+ C+W P Y L+++SWD
Sbjct: 409 HSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNW--HPYYPTLISSSWDGD 466
Query: 495 LKFWD 509
L W+
Sbjct: 467 LVKWE 471
Score = 21.0 bits (42), Expect(2) = 7e-06
Identities = 8/45 (17%), Positives = 18/45 (40%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 338
+ I+ D ++ W++ + P + + D W D T+
Sbjct: 332 YFISNGKDQTIKLWDIRKMSSSAPARHEVLRNYEWDYRWMDYPTE 376
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 46.8 bits (106), Expect = 9e-06
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
L++GS D + WE S K K V V + DG + AS DKSV+ W+
Sbjct: 332 LVSGSDDFTMFLWEPSVS-KQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGI 390
Query: 387 ANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
Q + V H PV W + + L++ S D TLK W+ RT
Sbjct: 391 TGQFVTVFRGHVGPVYQVSW--SADSRLLLSGSKDSTLKIWEIRT 433
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
++ + S+D VR W T G+ V + GPV V+W D + S D ++K W++
Sbjct: 374 WIASASFDKSVRLWNGIT-GQFVTVFRGHV-GPVYQVSWSADSRLLLSGSKDSTLKIWEI 431
Query: 384 AANQTMQ-VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
+ Q + H V W +P+ +++ D+ LK W
Sbjct: 432 RTKKLKQDLPGHADEVFAVDW--SPDGEKVVSGGKDRVLKLW 471
Score = 33.9 bits (74), Expect = 0.067
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +3
Query: 153 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDG 332
+ V + FSP L +GS D VR W++ T +T + VL VAW DG
Sbjct: 110 EAVLCVSFSPDGKQL----ASGSGDTTVRLWDLYT--ETPLFTCKGHKNWVLTVAWSPDG 163
Query: 333 TKVFMASTDKSVKCWD 380
+ S + CW+
Sbjct: 164 KHLVSGSKSGEICCWN 179
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 45.2 bits (102), Expect = 3e-05
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 8/143 (5%)
Frame = +3
Query: 108 SNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGK-TVPKAA 284
S N + E+ S D + S + L A D VR + + K T ++
Sbjct: 135 SEKSNDEEEIGSEEDGSDSDEFHEKSEEEIDRILAAACDDGCVRLYRISNLEKLTYYRSL 194
Query: 285 QPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD-LAANQTMQVAAH----DAPVKTCHWIK 449
+ G L V W D ++F S+D ++CWD + ++ ++ A + + C W
Sbjct: 195 PRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVW-S 253
Query: 450 APNYTCLMTTSWDK--TLKFWDT 512
+ C + S D T++FWD+
Sbjct: 254 LLSLRCSVLVSGDSTGTVQFWDS 276
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 43.2 bits (97), Expect = 1e-04
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Frame = +3
Query: 96 ISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGK-TV 272
I G + D E S +D E L L A D VR + + S K T
Sbjct: 131 IQNGYLSEKSDDEEESGVEDDSELDELDEKVEALDRHLAAACDDGCVRIYYISESDKLTY 190
Query: 273 PKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL-----AANQTMQVAAHDAPVKTC 437
++ + G L V W D ++F S+D ++CWD T+ + + C
Sbjct: 191 YRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCWDANLCHEVYRITVGLGGLGNGSELC 250
Query: 438 HW-IKAPNYTCLMTTSWDKTLKFWDTR 515
W + + Y L++ +++FWD++
Sbjct: 251 IWSLLSLRYGVLVSGDSTGSVQFWDSQ 277
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 42.7 bits (96), Expect = 1e-04
Identities = 31/101 (30%), Positives = 45/101 (44%)
Frame = +3
Query: 78 TMFGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVET 257
T+ +I S + ++ S + V L FSP L L + SWD VR W+V
Sbjct: 453 TLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSP----LTQLLASSSWDYTVRLWDVFA 508
Query: 258 SGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
S TV D VL VA+ DG ++ ++ D + WD
Sbjct: 509 SKGTVETFRHNHD--VLTVAFRPDGKQLASSTLDGQINFWD 547
Score = 34.7 bits (76), Expect = 0.038
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = +3
Query: 153 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDG 332
+ V+AL F + H+ L++ S D VR W+ + K P + + G
Sbjct: 392 NAVTALHFMADN---HS-LLSASLDGTVRAWDFKRY-KNYKTYTTPTPRQFVSLTADPSG 446
Query: 333 TKVFMASTDK-SVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
V + D + W Q + + H+APV + +P L ++SWD T++ W
Sbjct: 447 DVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMF--SPLTQLLASSSWDYTVRLW 504
Query: 507 D 509
D
Sbjct: 505 D 505
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 42.7 bits (96), Expect = 1e-04
Identities = 31/101 (30%), Positives = 45/101 (44%)
Frame = +3
Query: 78 TMFGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVET 257
T+ +I S + ++ S + V L FSP L L + SWD VR W+V
Sbjct: 493 TLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSP----LTQLLASSSWDYTVRLWDVFA 548
Query: 258 SGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
S TV D VL VA+ DG ++ ++ D + WD
Sbjct: 549 SKGTVETFRHNHD--VLTVAFRPDGKQLASSTLDGQINFWD 587
Score = 34.7 bits (76), Expect = 0.038
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = +3
Query: 153 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDG 332
+ V+AL F + H+ L++ S D VR W+ + K P + + G
Sbjct: 432 NAVTALHFMADN---HS-LLSASLDGTVRAWDFKRY-KNYKTYTTPTPRQFVSLTADPSG 486
Query: 333 TKVFMASTDK-SVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
V + D + W Q + + H+APV + +P L ++SWD T++ W
Sbjct: 487 DVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMF--SPLTQLLASSSWDYTVRLW 544
Query: 507 D 509
D
Sbjct: 545 D 545
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 42.3 bits (95), Expect = 2e-04
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
Frame = +3
Query: 186 SVTLH---TFLIAGSWDCQVRCWEVET---SGKTVPKAAQPMDGPVLDVAWHDDGTKVFM 347
+V LH T LI+G + +R W++ S + VP+ P+ L V W DGT V
Sbjct: 130 TVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRS--LTVMW--DGTMVVA 185
Query: 348 ASTDKSVKCW-DLAANQTM-------QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKF 503
A+ + W L QTM ++ AH++ + C + +P L T S DKT+K
Sbjct: 186 ANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKC--LLSPGNKYLATASSDKTVKI 243
Query: 504 WD 509
W+
Sbjct: 244 WN 245
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTS 482
V+ V + G ++ S D SVK WDL + + +PV T + PN T L++
Sbjct: 87 VMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPVNTV--VLHPNQTELISGD 144
Query: 483 WDKTLKFWDTR 515
+ ++ WD R
Sbjct: 145 QNGNIRVWDLR 155
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 348 ASTDKSVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
AS+DK+VK W+L + +V H+ V C + Y L+T S D T + W R
Sbjct: 235 ASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEY--LVTASSDTTARLWSMR 289
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = +3
Query: 297 GPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMT 476
G VLD++W D + AS DK+V+ W + +N + V AH++ V + + N M+
Sbjct: 329 GEVLDISWSKDNY-LLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQF-NPVNENYFMS 386
Query: 477 TSWDKTLKFWD 509
S D ++ W+
Sbjct: 387 GSIDGKVRIWN 397
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 41.5 bits (93), Expect = 3e-04
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFM-ASTDKSVKCWD 380
++++ S D ++ W+ E +G + + V+ V ++ T F AS D+++K W+
Sbjct: 113 YVLSSSDDMLIKLWDWE-NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN 171
Query: 381 LAA-NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
L + + + AH V + + L+T S D T K WD +T
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 218
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 41.5 bits (93), Expect = 3e-04
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFM-ASTDKSVKCWD 380
++++ S D ++ W+ E +G + + V+ V ++ T F AS D+++K W+
Sbjct: 113 YVLSSSDDMLIKLWDWE-NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN 171
Query: 381 LAA-NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
L + + + AH V + + L+T S D T K WD +T
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 218
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 41.5 bits (93), Expect = 3e-04
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFM-ASTDKSVKCWD 380
++++ S D ++ W+ E +G + + V+ V ++ T F AS D+++K W+
Sbjct: 113 YVLSSSDDMLIKLWDWE-NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN 171
Query: 381 LAA-NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
L + + + AH V + + L+T S D T K WD +T
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 218
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 41.5 bits (93), Expect = 3e-04
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = +3
Query: 156 TVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGT 335
TV + +SP L T S+D W+ S + + V V+W+ G+
Sbjct: 76 TVRSCAWSPSGQLLAT----ASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGS 131
Query: 336 KVFMASTDKSVKCWDLAANQTMQVAA----HDAPVKTCHWIKAPNYTCLMTTSWDKTLKF 503
+ S DKSV W++ AA H VK W P L + S+D T+K
Sbjct: 132 CLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQW--HPTMDVLFSCSYDNTIKV 189
Query: 504 W 506
W
Sbjct: 190 W 190
Score = 29.9 bits (64), Expect = 1.1
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKT---VPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCW 377
L + S D VR WE + ++ + V AW G + AS D + W
Sbjct: 42 LASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIW 101
Query: 378 DLAANQTMQVAA---HDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
++ ++ H+ VK+ W + + CL T S DK++ W+
Sbjct: 102 KNYGSEFECISTLEGHENEVKSVSWNASGS--CLATCSRDKSVWIWE 146
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 41.1 bits (92), Expect = 4e-04
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFM-ASTDKSVKCWD 380
++++ S D ++ W+ E G + + V+ V ++ T F AS D+++K W+
Sbjct: 113 YVLSSSDDMLIKLWDWE-KGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
Query: 381 LAA-NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
L + + + AH V + + L+T S D T K WD +T
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 218
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAAN-----QTMQVAAHDAPVKTCHWIKAPNYTC 467
V VAW+ +GTK+ S D++ + W++ + + +++ H V W P ++
Sbjct: 23 VHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCW--DPKHSD 80
Query: 468 LM-TTSWDKTLKFWDTRT 518
L+ T S DK+++ WD R+
Sbjct: 81 LVATASGDKSVRLWDARS 98
Score = 30.7 bits (66), Expect = 0.62
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD--GPVLDVAWHDDGTK-VFMASTDKSVK 371
T L +GS D R W +E G + K + V + W + V AS DKSV+
Sbjct: 33 TKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVR 92
Query: 372 CWDLAANQTMQ 404
WD + + Q
Sbjct: 93 LWDARSGKCTQ 103
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Frame = +3
Query: 216 GSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQ 395
GS+D WE + + + V V+W+ G+ + DKSV W++ +
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEE 125
Query: 396 -----TMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
T+ V H VK W P L + S+D T+K W
Sbjct: 126 DDEFDTIAVLTGHSEDVKMVLW--HPTMDVLFSCSYDNTIKIW 166
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 39.5 bits (88), Expect = 0.001
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPK-AAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
+L S DC W+V K K + PV V+W D TK+ + +K WD
Sbjct: 238 YLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWD 297
Query: 381 LAANQTMQVAAHD---APVKTCHWIKAPNYTCLMTTSWD--KTLKFWDT 512
+ ++ V +C W P+ T L+ S D + + WDT
Sbjct: 298 VDTGVLRHTFGNNNTGFTVSSCAWF--PDSTRLVCGSSDPERGIVMWDT 344
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 327 DGTKVFMASTDKSVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKF 503
D + + S D V W+L + ++V + H V W N L + S D+T++
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSW-NPKNPRMLASASDDQTIRI 512
Query: 504 W 506
W
Sbjct: 513 W 513
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 39.5 bits (88), Expect = 0.001
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVET--SGKTV--PKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKC 374
++ S D +R W+V S V PK A+P PV AW DG ++ D S++
Sbjct: 294 VLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQI 353
Query: 375 WDL----AANQTMQVA-AHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
W L + + V AH + + + + + L++ S+D +LK WD R
Sbjct: 354 WSLKPGWGSRPDIYVGKAHTDDITSVKF--SSDGRILLSRSFDGSLKVWDLR 403
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVP-KAAQPMDGPVLDVA-WHDDGTKVFMASTDKSVKCWD 380
L AG+ + W+ T ++ P K ++G +V + G ++ S DK++K WD
Sbjct: 225 LFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWD 284
Query: 381 LAANQ-TMQVAAHDAPVKT-CHWIKAPNYTCLMTTSWDKTLKFW 506
L Q M + H V + W K CL+++S D T+K W
Sbjct: 285 LNTLQCIMTLKQHTGTVTSLLCWDK-----CLISSSLDGTIKVW 323
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 291 MDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTC 467
M G + DV WH + + S+DK+V+ WD+ + +++ H + V + +P+
Sbjct: 498 MAGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSL--AMSPDGRY 555
Query: 468 LMTTSWDKTLKFWDTRTA 521
+ + D T+ WD TA
Sbjct: 556 MASGDEDGTIMMWDLSTA 573
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +3
Query: 297 GPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQ-VAAHDAPVKTCHWIKAPNYTCLM 473
GPV + G V +S D +++ W N + H+ PV + +Y
Sbjct: 419 GPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHY--FA 476
Query: 474 TTSWDKTLKFW 506
+ S D+T + W
Sbjct: 477 SCSHDRTARIW 487
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/101 (21%), Positives = 46/101 (45%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
L G D V+ W+ T+ T+ K+ G +LD+A D V A++ ++ WD++
Sbjct: 246 LFTGGQDRAVKMWD--TNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVS 303
Query: 387 ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
+ + + + +++ ++D+T+K WD
Sbjct: 304 SGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWD 344
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
++A + D V W+ T + GPV + W DG V + + V+ WD A
Sbjct: 153 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 212
Query: 387 ANQTMQV--AAHDAPVKTCHW 443
+N+ ++ H + V + W
Sbjct: 213 SNRQLRTLKGGHQSRVGSLAW 233
Score = 33.9 bits (74), Expect = 0.067
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWD---LAANQTMQ----VAAHDAPVKTCHWIKAPNY 461
V + W G ++ D V WD ++N T Q + H + VK W P
Sbjct: 269 VCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW--CPFQ 326
Query: 462 TCLMTTSW---DKTLKFWDTRT 518
L+ T D+T+KFW+T T
Sbjct: 327 ANLLATGGGGGDRTIKFWNTHT 348
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
++A + D V W+ T + GPV + W DG V + + V+ WD A
Sbjct: 143 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 202
Query: 387 ANQTMQV--AAHDAPVKTCHW 443
+N+ ++ H + V + W
Sbjct: 203 SNRQLRTLKGGHQSRVGSLAW 223
Score = 33.9 bits (74), Expect = 0.067
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWD---LAANQTMQ----VAAHDAPVKTCHWIKAPNY 461
V + W G ++ D V WD ++N T Q + H + VK W P
Sbjct: 259 VCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW--CPFQ 316
Query: 462 TCLMTTSW---DKTLKFWDTRT 518
L+ T D+T+KFW+T T
Sbjct: 317 ANLLATGGGGGDRTIKFWNTHT 338
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +3
Query: 327 DGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
DG + A DK V W++ Q A + T + PN T L T+S+DKT+K W
Sbjct: 519 DGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFR-PNSTQLATSSFDKTIKIW 577
Query: 507 D 509
D
Sbjct: 578 D 578
Score = 36.7 bits (81), Expect = 0.009
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Frame = +3
Query: 87 GSQISTGSNNPNKDVEVSSPPD-DTVSALEFSPPSVTLHTF------LIAGSWDCQVRCW 245
GS T N + E S P + VS + S V +F L + D +V W
Sbjct: 476 GSLFGTLKRNSSVHTETSKPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIW 535
Query: 246 EVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA--ANQTMQVAAHD 419
+ET V + + DV + + T++ +S DK++K WD + ++ H
Sbjct: 536 NMETL--QVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 593
Query: 420 APVKTCHWIKAPNYT-CLMTTSWDKTLKFWD 509
APV + + P T L + + ++FWD
Sbjct: 594 APVMSIDF--HPKKTELLCSCDSNNDIRFWD 622
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +3
Query: 327 DGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
DG + A DK V W++ Q A + T + PN T L T+S+DKT+K W
Sbjct: 521 DGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFR-PNSTQLATSSFDKTIKIW 579
Query: 507 D 509
D
Sbjct: 580 D 580
Score = 36.7 bits (81), Expect = 0.009
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Frame = +3
Query: 87 GSQISTGSNNPNKDVEVSSPPD-DTVSALEFSPPSVTLHTF------LIAGSWDCQVRCW 245
GS T N + E S P + VS + S V +F L + D +V W
Sbjct: 478 GSLFGTLKRNSSVHTETSKPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIW 537
Query: 246 EVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA--ANQTMQVAAHD 419
+ET V + + DV + + T++ +S DK++K WD + ++ H
Sbjct: 538 NMETL--QVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 420 APVKTCHWIKAPNYT-CLMTTSWDKTLKFWD 509
APV + + P T L + + ++FWD
Sbjct: 596 APVMSIDF--HPKKTELLCSCDSNNDIRFWD 624
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +3
Query: 327 DGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
DG + A DK V W++ Q A + T + PN T L T+S+DKT+K W
Sbjct: 521 DGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFR-PNSTQLATSSFDKTIKIW 579
Query: 507 D 509
D
Sbjct: 580 D 580
Score = 36.7 bits (81), Expect = 0.009
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Frame = +3
Query: 87 GSQISTGSNNPNKDVEVSSPPD-DTVSALEFSPPSVTLHTF------LIAGSWDCQVRCW 245
GS T N + E S P + VS + S V +F L + D +V W
Sbjct: 478 GSLFGTLKRNSSVHTETSKPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIW 537
Query: 246 EVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA--ANQTMQVAAHD 419
+ET V + + DV + + T++ +S DK++K WD + ++ H
Sbjct: 538 NMETL--QVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 420 APVKTCHWIKAPNYT-CLMTTSWDKTLKFWD 509
APV + + P T L + + ++FWD
Sbjct: 596 APVMSIDF--HPKKTELLCSCDSNNDIRFWD 624
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +3
Query: 327 DGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
DG + A DK V W++ Q A + T + PN T L T+S+DKT+K W
Sbjct: 521 DGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFR-PNSTQLATSSFDKTIKIW 579
Query: 507 D 509
D
Sbjct: 580 D 580
Score = 36.7 bits (81), Expect = 0.009
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Frame = +3
Query: 87 GSQISTGSNNPNKDVEVSSPPD-DTVSALEFSPPSVTLHTF------LIAGSWDCQVRCW 245
GS T N + E S P + VS + S V +F L + D +V W
Sbjct: 478 GSLFGTLKRNSSVHTETSKPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIW 537
Query: 246 EVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA--ANQTMQVAAHD 419
+ET V + + DV + + T++ +S DK++K WD + ++ H
Sbjct: 538 NMETL--QVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 420 APVKTCHWIKAPNYT-CLMTTSWDKTLKFWD 509
APV + + P T L + + ++FWD
Sbjct: 596 APVMSIDF--HPKKTELLCSCDSNNDIRFWD 624
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +3
Query: 327 DGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
DG + A DK V W++ Q A + T + PN T L T+S+DKT+K W
Sbjct: 521 DGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFR-PNSTQLATSSFDKTIKIW 579
Query: 507 D 509
D
Sbjct: 580 D 580
Score = 36.7 bits (81), Expect = 0.009
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Frame = +3
Query: 87 GSQISTGSNNPNKDVEVSSPPD-DTVSALEFSPPSVTLHTF------LIAGSWDCQVRCW 245
GS T N + E S P + VS + S V +F L + D +V W
Sbjct: 478 GSLFGTLKRNSSVHTETSKPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIW 537
Query: 246 EVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA--ANQTMQVAAHD 419
+ET V + + DV + + T++ +S DK++K WD + ++ H
Sbjct: 538 NMETL--QVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 420 APVKTCHWIKAPNYT-CLMTTSWDKTLKFWD 509
APV + + P T L + + ++FWD
Sbjct: 596 APVMSIDF--HPKKTELLCSCDSNNDIRFWD 624
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 38.3 bits (85), Expect = 0.003
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
+ L +GS D + W+V G++ + V D+ + D G K+ +S DK ++ WD
Sbjct: 119 SMLASGSKDNDIILWDVV--GESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWD 176
Query: 381 LAANQTMQ-VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
L MQ V+ H + V + P ++T S D+ L+F+
Sbjct: 177 LETQHCMQIVSGHHSEVWSVD--TDPEERYVVTGSADQELRFY 217
Score = 33.9 bits (74), Expect = 0.067
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 300 PVLDVAWHDDGTKVFMASTDKSVKCWDLAANQT-MQVAAHDAPVKTCHWIKAPNYTCLMT 476
PV+ + DG + S DK++K W L + AH V +++ +Y L +
Sbjct: 584 PVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHY--LFS 641
Query: 477 TSWDKTLKFWD 509
D+ +K+WD
Sbjct: 642 IGKDRLVKYWD 652
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/70 (32%), Positives = 32/70 (45%)
Frame = +3
Query: 297 GPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMT 476
G VLD+AW D + AS DK+V+ W +Q + V H+ V TC N +
Sbjct: 273 GDVLDLAWSDSNL-LLSASKDKTVRLWRTGCDQCLHVFHHNNYV-TCVEFNPVNKNNFAS 330
Query: 477 TSWDKTLKFW 506
S D + W
Sbjct: 331 GSIDGKARIW 340
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 37.1 bits (82), Expect = 0.007
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = +3
Query: 165 ALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVF 344
+++FSP T ++GS DC V+ W + +++ P + + + + + F
Sbjct: 813 SVDFSPSDPTK---FVSGSDDCSVKLWSINEK-RSLGTIWSPANVCCVQFSSYSNHLLAF 868
Query: 345 MASTDKSVKCWDLAANQT--MQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
S D V C+DL +T +A H+ K ++K + +++ S D +LK W+
Sbjct: 869 -GSADYKVYCYDLRYVKTPWCTLAGHE---KAVSYVKFMDSETIVSASTDNSLKLWN 921
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 36.7 bits (81), Expect = 0.009
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Frame = +3
Query: 186 SVTLH---TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPV--LDVAWHDDGTKVFMA 350
+V LH T LI+G + +R W++ + + + +D V L V W DGT V A
Sbjct: 124 TVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPE-VDTAVRSLTVMW--DGTMVVAA 180
Query: 351 STDKSVKCWDLA-ANQTM-------QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
+ + W L QTM ++ AH+ + C A Y L T S DKT+K W
Sbjct: 181 NNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKY--LATASSDKTVKIW 238
Query: 507 D 509
+
Sbjct: 239 N 239
Score = 31.5 bits (68), Expect = 0.36
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = +3
Query: 177 SPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMAST 356
S PSV L T S+D +R WE ET G+ + Q D V + D A+
Sbjct: 2 SQPSVILAT----ASYDHTIRFWEAET-GRCY-RTIQYPDSHVNRLEITPD-KHYLAAAC 54
Query: 357 DKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTC----LMTTSWDKTLKFWDTR 515
+ ++ +D+ +N V +D+ + A + C + + S D T+K WD R
Sbjct: 55 NPHIRLFDVNSNSPQPVMTYDSHTNN---VMAVGFQCDAKWMYSGSEDGTVKIWDLR 108
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 36.7 bits (81), Expect = 0.009
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 297 GPVLDVAWHDDGTKVFMASTDKSVKCWDLAAN 392
G + V+W DG +V S DKS K WD++ N
Sbjct: 233 GSIYAVSWSPDGKQVLTVSADKSAKIWDISDN 264
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 312 VAWHDDGTKVFMASTDKSVKCWDLAANQTM-QVAAHDAPVKTCHWIK-APNYTCLMTTSW 485
V + DG+K S+DK +D + + ++++ D + + + +P+ ++T S
Sbjct: 193 VRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSA 252
Query: 486 DKTLKFWD 509
DK+ K WD
Sbjct: 253 DKSAKIWD 260
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 36.7 bits (81), Expect = 0.009
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
+L S+D R W++ T + + + V +A+ DG D + WDL
Sbjct: 353 YLGTTSYDKTWRLWDINTGAELLLQEGHSRS--VYGIAFQQDGALAASCGLDSLARVWDL 410
Query: 384 AANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
+++ V H PV + ++ +PN L + D + WD R
Sbjct: 411 RTGRSILVFQGHIKPVFSVNF--SPNGYHLASGGEDNQCRIWDLR 453
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/73 (24%), Positives = 28/73 (38%)
Frame = +3
Query: 294 DGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLM 473
D P+ ++ DG + S K W++ D + + +P CL
Sbjct: 255 DRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLA 314
Query: 474 TTSWDKTLKFWDT 512
T S D+T K W T
Sbjct: 315 TASADRTAKLWKT 327
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 348 ASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
AS D++ K W H + + + Y L TTS+DKT + WD T
Sbjct: 316 ASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKY--LGTTSYDKTWRLWDINT 370
Score = 28.3 bits (60), Expect = 3.3
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWH-DDGTKVFMASTDKSVKCWD- 380
L +G D Q R W++ A V V + +G + AS D V W
Sbjct: 438 LASGGEDNQCRIWDLRMRKSLYIIPAHA--NLVSQVKYEPQEGYFLATASYDMKVNIWSG 495
Query: 381 LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
+ +A H++ V + I A + +C+ T S D+T+K W
Sbjct: 496 RDFSLVKSLAGHESKVASLD-ITADS-SCIATVSHDRTIKLW 535
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 36.3 bits (80), Expect = 0.012
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTT 479
V V WH + + D+ VK WD + + + + H V + W + N+ L+T
Sbjct: 271 VKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNW--LLTA 328
Query: 480 SWDKTLKFWDTRT 518
S D+ +K +D RT
Sbjct: 329 SKDQIIKLYDIRT 341
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 312 VAWHDDGTKVFMASTDKSVKCWD-LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWD 488
V W G ++ S W+ + N M + AHD P+++ W NY +++
Sbjct: 129 VLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENY--MVSGDDG 186
Query: 489 KTLKFW 506
TLK+W
Sbjct: 187 GTLKYW 192
Score = 30.3 bits (65), Expect = 0.82
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCW 377
+ ++GS D + W V + + D V D+AWH G + S D + K W
Sbjct: 367 YFVSGSSDGSICHWIVGHENPQI-EIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 36.3 bits (80), Expect = 0.012
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAW-HDDGTKVFMASTDKSVKCWD 380
+LI G ++ +R +++ P G + + W H D T + + V+ WD
Sbjct: 116 YLITGGFEKILRVFDLNRLDAP-PTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWD 174
Query: 381 LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
+ + + +Q +PV + + Y +TT+ T+KFWD
Sbjct: 175 VRSGKIVQTLETKSPVTSAEVSQDGRY---ITTADGSTVKFWD 214
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 36.3 bits (80), Expect = 0.012
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 150 DDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGK--TVPKAAQPMDGPVLDVAWH 323
DD V+A+ S T++T GS D ++R W T K T+ + V +A +
Sbjct: 235 DDAVNAIAVSTNG-TVYT----GSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALN 289
Query: 324 DDGTKVFMASTDKSVKCWD 380
DDG+ +F S D+S+ W+
Sbjct: 290 DDGSVLFSGSCDRSILVWE 308
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 35.9 bits (79), Expect = 0.017
Identities = 28/97 (28%), Positives = 47/97 (48%)
Frame = +3
Query: 225 DCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQ 404
D QV W+V T G+ + K + DG V V ++D + V A D+S++ WD ++
Sbjct: 81 DRQVYYWDVST-GRVIRKF-RGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEP 138
Query: 405 VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
V D + T + T ++ S D T++ +D R
Sbjct: 139 VQIIDTFLDTVMSVVLTK-TEIIGGSVDGTVRTFDMR 174
Score = 30.3 bits (65), Expect = 0.82
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 339 VFMASTDKSVKCWDLA-ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
V S D V WDL A + AHD V + + P C++T+S D T++ W
Sbjct: 243 VIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSY--HPKEDCMLTSSVDGTIRVW 297
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTS 482
VLD++W + +S DK+V+ WDL++ ++V +H V TC + ++ S
Sbjct: 471 VLDLSW-SKSQHLLSSSMDKTVRLWDLSSKTCLKVFSHSDYV-TCIQFNPVDDNYFISGS 528
Query: 483 WDKTLKFW 506
D ++ W
Sbjct: 529 LDAKVRIW 536
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 273 PKAAQPMDGPVLDVAW-HDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIK 449
PK G + V W H D T + + ++ WD+ +++ + +PV + +
Sbjct: 133 PKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTLETKSPVTSAEVSQ 192
Query: 450 APNYTCLMTTSWDKTLKFWDTR 515
Y +TT+ ++KFWD +
Sbjct: 193 DGRY---ITTADGSSVKFWDAK 211
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 35.5 bits (78), Expect = 0.022
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPV----LD--VAWHDDGT-KVFMAST- 356
+ +IAGS + ++ ++++ + TV ++ G V D + H + T ++F+AS
Sbjct: 501 SMVIAGSANGSLKLYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGY 560
Query: 357 DKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLM--TTSWDKTLKFWDTR 515
K V +D+ +QV A+ + + +K N++ + T+S+DK +K WD R
Sbjct: 561 SKDVALYDIGRGTRLQVFAN-MHQEHINVVKFSNHSPFLFATSSFDKDVKLWDLR 614
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 234 VRCWEVETSGKTVPKAAQPMD-GPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQ-- 404
V W+ +SG T D GPV + W DG + + + V+ WD +N+ ++
Sbjct: 145 VYLWDA-SSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTL 203
Query: 405 VAAHDAPVKTCHW 443
+ H++ V + W
Sbjct: 204 IGGHESRVGSLAW 216
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 35.1 bits (77), Expect = 0.029
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 297 GPVLDVAWHDDGTK--VFMASTDKSVKCWDLAANQTMQVAAHDAPV-KTCHWIKAPNYTC 467
G V D+A+ + + V DK +K WD++ + HDAPV C K N
Sbjct: 453 GAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHFTFEGHDAPVYSICPHYK-ENIQF 511
Query: 468 LMTTSWDKTLKFW 506
+ +T+ D +K W
Sbjct: 512 IFSTAIDGKIKAW 524
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 35.1 bits (77), Expect = 0.029
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQP-MDGPVLDVAWHDDGT 335
V+ + +SP T I S D + ++ +T K A++ G + V+W D
Sbjct: 54 VNCIRYSPDG----TKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 336 KVFMASTDKSVKCWDLAANQTM 401
+V S DKS K W++A + T+
Sbjct: 110 RVLTVSADKSAKVWEVAEDGTI 131
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 35.1 bits (77), Expect = 0.029
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAW-HDDGTKVFMASTDKSVKCWDL 383
L+ G ++ +R +++ P G + + W H D T + + V+ WD+
Sbjct: 117 LLTGGFEKILRVFDMNRLDAP-PTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDV 175
Query: 384 AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
+ + +Q +PV + + Y +TT+ T+KFWD
Sbjct: 176 RSGKIVQTLETKSPVTSAEVSQDGRY---ITTADGSTVKFWD 214
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 35.1 bits (77), Expect = 0.029
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAW-HDDGTKVFMASTDKSVKCWDL 383
L+ G ++ +R +++ P G + + W H D T + + V+ WD+
Sbjct: 117 LLTGGFEKILRVFDMNRLDAP-PTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDV 175
Query: 384 AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
+ + +Q +PV + + Y +TT+ T+KFWD
Sbjct: 176 RSGKIVQTLETKSPVTSAEVSQDGRY---ITTADGSTVKFWD 214
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 34.7 bits (76), Expect = 0.038
Identities = 26/134 (19%), Positives = 56/134 (41%), Gaps = 3/134 (2%)
Frame = +3
Query: 117 PNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGK-TVPKAAQPM 293
P++ ++ D V L+FS +L + S D WE+ G ++
Sbjct: 263 PSQTAQILESHTDEVWFLQFSHNG----KYLASSSKDQTAIIWEISADGHISLKHTLVGH 318
Query: 294 DGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHD--APVKTCHWIKAPNYTC 467
PV+ + W D +V ++ ++ WD+ + + + +P+ +C W P+
Sbjct: 319 HKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPI-SCGWY--PDGQG 375
Query: 468 LMTTSWDKTLKFWD 509
++ D+++ WD
Sbjct: 376 IIAGMTDRSICMWD 389
Score = 31.9 bits (69), Expect = 0.27
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 234 VRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
+R W+V+ SG V + P+ W+ DG + TD+S+ WDL
Sbjct: 343 IRRWDVD-SGDCVHMYEKGGISPI-SCGWYPDGQGIIAGMTDRSICMWDL 390
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 34.7 bits (76), Expect = 0.038
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = +3
Query: 294 DGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLM 473
+G + + W DG+K+ S D+S + W++ + + + V+ W + + ++
Sbjct: 235 EGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRV--WDCCISDSLIV 292
Query: 474 TTSWDKTLKFW 506
T D T + W
Sbjct: 293 TAGEDCTCRVW 303
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 34.7 bits (76), Expect = 0.038
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = +3
Query: 294 DGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLM 473
+G + + W DG+K+ S D+S + W++ + + + V+ W + + ++
Sbjct: 235 EGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRV--WDCCISDSLIV 292
Query: 474 TTSWDKTLKFW 506
T D T + W
Sbjct: 293 TAGEDCTCRVW 303
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 34.7 bits (76), Expect = 0.038
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTT 479
+ D++W + + AS D+++K WD+ N+ T + H VK+ N L++
Sbjct: 131 IFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSM-CSHPTNSDLLVSG 189
Query: 480 SWDKTLKFWDTR 515
S D WD R
Sbjct: 190 SRDGCFALWDLR 201
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 34.7 bits (76), Expect = 0.038
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
+ L AG D W+ ET G + V+W G ++ +++ DKS+ WD
Sbjct: 36 SLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVSAADKSLTLWD 95
Query: 381 LAANQ 395
++ +
Sbjct: 96 VSTGE 100
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 34.7 bits (76), Expect = 0.038
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 339 VFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
V DK +K WDL+ + H+APV + + N + +T+ D +K W
Sbjct: 470 VVTCGDDKLIKVWDLSGKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAW 525
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 34.7 bits (76), Expect = 0.038
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTS 482
+LD++W + +S DK+V+ WD+ +++ AH+ V TC + ++ S
Sbjct: 509 ILDLSW-SKSQLLLSSSMDKTVRLWDIETKTCLKLFAHNDYV-TCIQFSPVDENYFLSGS 566
Query: 483 WDKTLKFW 506
D ++ W
Sbjct: 567 LDAKIRIW 574
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 34.3 bits (75), Expect = 0.050
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSW-DCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGT 335
V+A+++S T H L+A + D V W V ++ K +A + PV DV W G
Sbjct: 163 VTAIDWS----TSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGL 218
Query: 336 KVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
+ D + + +D+ Q D V + N ++ +L+ WD R
Sbjct: 219 SLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKF-HPDNCNVFLSGGSKGSLRLWDIR 277
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTS 482
VLD++W + +S DK+V+ WD+ +++ AH+ V TC + ++ S
Sbjct: 522 VLDLSW-SRSQLLLSSSMDKTVRLWDIETQSCLKLFAHNDYV-TCVQFNPLDEDYFISGS 579
Query: 483 WDKTLKFWD 509
D ++ W+
Sbjct: 580 LDAKIRIWN 588
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 34.3 bits (75), Expect = 0.050
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 338
V +L FSP + L +GS D V + E GKT+ + VL V DG
Sbjct: 203 VRSLVFSPVDPRV---LFSGSDDGHVNMHDAE--GKTLLGSMSGHTSWVLSVDASPDGGA 257
Query: 339 VFMASTDKSVKCWDL---AANQTM 401
+ S+D++V+ WDL AA QTM
Sbjct: 258 IATGSSDRTVRLWDLKMRAAIQTM 281
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTS 482
VLD+AW + +S DK+V+ W+L++ ++V +H V TC + ++ S
Sbjct: 516 VLDLAW-SKSQHLLSSSMDKTVRLWNLSSQTCLKVFSHSDYV-TCIQFNPVDDRYFISGS 573
Query: 483 WDKTLKFW 506
D ++ W
Sbjct: 574 LDAKVRVW 581
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 33.9 bits (74), Expect = 0.067
Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 1/141 (0%)
Frame = +3
Query: 87 GSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHT-FLIAGSWDCQVRCWEVETSG 263
G + G N K + + D ++S S+ + T L AG+ D + W +
Sbjct: 202 GPWLLVGMPNLVKAWNIETNADQSLSGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAAT 261
Query: 264 KTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHW 443
+A + V + +++ S DK++K W L Q +Q + V
Sbjct: 262 NCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSV-VMSL 320
Query: 444 IKAPNYTCLMTTSWDKTLKFW 506
I + L++ S D T+K W
Sbjct: 321 ICWDQF--LLSCSLDNTVKIW 339
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 33.9 bits (74), Expect = 0.067
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 324 DDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKF 503
D G + S D V +DL N + + KT ++K + + L+++S D TLK
Sbjct: 671 DSGRSLAFGSADHKVYYYDLR-NPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKL 729
Query: 504 WD 509
WD
Sbjct: 730 WD 731
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 33.5 bits (73), Expect = 0.088
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 330 GTKVFMASTDKSVKCWDLAANQ-TMQVAAHDAPVKT-CHWIKAPNYTCLMTTSWDKTLKF 503
G ++ S DK++K WDL Q M + H V + W K CL+++S D T+K
Sbjct: 322 GEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDK-----CLISSSLDGTIKL 376
Query: 504 W 506
W
Sbjct: 377 W 377
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 33.5 bits (73), Expect = 0.088
Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +3
Query: 234 VRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQV-- 407
V W+ + +GPV + W DG + + + V+ WD +N+ ++
Sbjct: 114 VYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLR 173
Query: 408 AAHDAPVKTCHW 443
H++ V + W
Sbjct: 174 GGHESRVGSLAW 185
Score = 31.5 bits (68), Expect = 0.36
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 11/83 (13%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWD----LAANQTMQ----VAAHDAPVKTCHWIKAPN 458
V + W + G K+ D V WD ++N T Q H A V+ W P
Sbjct: 221 VCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW--CPF 278
Query: 459 YTCLMTTS---WDKTLKFWDTRT 518
L+ T D +KFW+T T
Sbjct: 279 QASLLATGGGVGDGKIKFWNTHT 301
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 33.5 bits (73), Expect = 0.088
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 234 VRCWEVETSGKTVPKAAQPMD-GPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQV- 407
V W+ +SG T D GPV + W DG + + + V+ WD +N+ ++
Sbjct: 148 VYLWDA-SSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTL 206
Query: 408 -AAHDAPVKTCHW 443
H++ V + W
Sbjct: 207 RGGHESRVGSLAW 219
Score = 31.5 bits (68), Expect = 0.36
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWD---LAANQTMQ----VAAHDAPVKTCHWIKAPNY 461
V + W + G K D V WD ++ QT Q H A V+ W P
Sbjct: 255 VCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAW--CPFQ 312
Query: 462 TCLMTTS---WDKTLKFWDTRT 518
L+ T D +KFW+T T
Sbjct: 313 ASLLATGGGVGDGKIKFWNTHT 334
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 33.5 bits (73), Expect = 0.088
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 234 VRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAA 413
V W+ + V P GPV VA+H +G + + ++ +K WDL + +Q
Sbjct: 263 VTMWKPTSQAPLVQMQCHP--GPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQ-TI 319
Query: 414 HDAPVKT 434
H KT
Sbjct: 320 HSFHAKT 326
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/87 (18%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 189 VTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSV 368
V + +++ V W+ + + +GPV + W DG + + + V
Sbjct: 117 VDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEV 176
Query: 369 KCWDLAANQTMQV--AAHDAPVKTCHW 443
+ WD +N+ ++ H++ V + W
Sbjct: 177 QVWDCVSNRHVRTLRGGHESRVGSLAW 203
Score = 30.3 bits (65), Expect = 0.82
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWD---LAANQTMQ----VAAHDAPVKTCHWIKAPNY 461
V + W + G K+ D V WD ++N T Q H A V+ W P
Sbjct: 239 VCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAW--CPFQ 296
Query: 462 TCLMTTS---WDKTLKFWDTRT 518
L+ T D + FW+T T
Sbjct: 297 ASLLATGGGVGDGKINFWNTHT 318
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 33.1 bits (72), Expect = 0.12
Identities = 23/100 (23%), Positives = 41/100 (41%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 386
L AG+ D + W ++ AA + + V+ + +++ + D S+K W L
Sbjct: 236 LFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLD 295
Query: 387 ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
Q +Q V I + L++ S D T+K W
Sbjct: 296 NLQCIQTLTEHTSV-VMSLICWDQF--LLSCSLDNTVKIW 332
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 33.1 bits (72), Expect = 0.12
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 5/122 (4%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVP-KAAQPMDG---PVLDVA-WH 323
V+ L+F P L + G+ V CWE++ + K P G ++++ W
Sbjct: 149 VTGLDFHPNGELLASIDTTGT----VLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWS 204
Query: 324 DDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKF 503
DG + + V +D + + D C+ APN + T+ DK +
Sbjct: 205 PDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLL 264
Query: 504 WD 509
WD
Sbjct: 265 WD 266
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = +3
Query: 186 SVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK-VFMASTDK 362
S T + L++GS DC+V+ W + M + V ++ + + + S D
Sbjct: 472 SRTEPSMLVSGSDDCKVKVWCTRQEASVI---NIDMKANICCVKYNPGSSNYIAVGSADH 528
Query: 363 SVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
+ +DL N + + K ++K + L + S D TL+ WD +
Sbjct: 529 HIHYYDL-RNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVK 578
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/103 (24%), Positives = 45/103 (43%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
T L +GS D V+ W + G ++ + + + G + S D V +D
Sbjct: 590 TLLASGSDDGSVKLWSIN-QGVSIGTIKTKANICCVQFP-SETGRSLAFGSADHKVYYYD 647
Query: 381 LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
L N + + KT +++ + + L+++S D TLK WD
Sbjct: 648 LR-NPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWD 689
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/103 (24%), Positives = 45/103 (43%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 380
T L +GS D V+ W + G ++ + + + G + S D V +D
Sbjct: 590 TLLASGSDDGSVKLWSIN-QGVSIGTIKTKANICCVQFP-SETGRSLAFGSADHKVYYYD 647
Query: 381 LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
L N + + KT +++ + + L+++S D TLK WD
Sbjct: 648 LR-NPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWD 689
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +3
Query: 339 VFMASTDKSVKCWDL----AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
V+ S D CWD+ A N+ Q + C + + T S+D+TL+ W
Sbjct: 179 VYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVW 238
Query: 507 DTRT 518
DTR+
Sbjct: 239 DTRS 242
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 32.3 bits (70), Expect = 0.20
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Frame = +3
Query: 144 PPDDTVSALE---FSPPSVTLH---TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPV 305
PP D V+ L S V+ H + L GS D ++R W+ A V
Sbjct: 5 PPPDPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGV 64
Query: 306 LDVA---WHDDGTKVFMASTDKSVKCWDL 383
L VA W + K+ D +VKCWD+
Sbjct: 65 LAVAASPWLGED-KIISQGRDGTVKCWDI 92
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVA-AHDAPVKTCHWIKAP--NYTCLM 473
V+DV++H + +F S D ++ WD ++ + A AH +P ++
Sbjct: 20 VMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPWLGEDKII 79
Query: 474 TTSWDKTLKFWD 509
+ D T+K WD
Sbjct: 80 SQGRDGTVKCWD 91
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 357 DKSVKCWDLA-ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
D VK WD+A A + H V+ C N + L+T S+D T+K WD R
Sbjct: 157 DGVVKYWDVAGATVISDLLGHKDYVR-CGDCSPVNDSMLVTGSYDHTVKVWDAR 209
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +3
Query: 318 WHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKT--CHWIKAPNYTCLMTTSWDK 491
W + DK ++ WD + ++ + + K KA + + +T S DK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDK 215
Query: 492 TLKFWDTRT 518
T K WD RT
Sbjct: 216 TAKLWDMRT 224
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +3
Query: 195 LHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP--VLDVAWHDDGTKVFMASTDKSV 368
L+ +++G D +R W+ ET GK + ++ + + + + D + S DK+
Sbjct: 159 LNQTIVSGGEDKVIRIWDAET-GKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTA 217
Query: 369 KCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTC 467
K WD+ ++ PV N+ C
Sbjct: 218 KLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHVC 250
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +3
Query: 318 WHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKT--CHWIKAPNYTCLMTTSWDK 491
W + DK ++ WD + ++ + + K KA + + +T S DK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDK 215
Query: 492 TLKFWDTRT 518
T K WD RT
Sbjct: 216 TAKLWDMRT 224
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +3
Query: 195 LHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP--VLDVAWHDDGTKVFMASTDKSV 368
L+ +++G D +R W+ ET GK + ++ + + + + D + S DK+
Sbjct: 159 LNQTIVSGGEDKVIRIWDAET-GKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTA 217
Query: 369 KCWDLAANQTMQVAAHDAPV 428
K WD+ ++ PV
Sbjct: 218 KLWDMRTLTLLKTYTTVVPV 237
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +3
Query: 318 WHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKT--CHWIKAPNYTCLMTTSWDK 491
W + DK ++ WD + ++ + + K KA + + +T S DK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDK 215
Query: 492 TLKFWDTRT 518
T K WD RT
Sbjct: 216 TAKLWDMRT 224
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +3
Query: 195 LHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP--VLDVAWHDDGTKVFMASTDKSV 368
L+ +++G D +R W+ ET GK + ++ + + + + D + S DK+
Sbjct: 159 LNQTIVSGGEDKVIRIWDAET-GKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTA 217
Query: 369 KCWDLAANQTMQVAAHDAPV 428
K WD+ ++ PV
Sbjct: 218 KLWDMRTLTLLKTYTTVVPV 237
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 32.3 bits (70), Expect = 0.20
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +3
Query: 210 IAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMAST---DKSVKCWD 380
I+GS D V + T GK V D V V + + +A+T DK + WD
Sbjct: 258 ISGSKDGSVHIVNIVT-GKVVSSLNSHTDS-VECVKFSPSSATIPLAATGGMDKKLIIWD 315
Query: 381 LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 512
L + + H+ V + WI Y L T + T+ WD+
Sbjct: 316 LQHSTPRFICEHEEGVTSLTWIGTSKY--LATGCANGTVSIWDS 357
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 32.3 bits (70), Expect = 0.20
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Frame = +3
Query: 237 RCWEVETSGKTVPKAAQPMDGPVLDV---AWHDDGTKVFMASTDKSVKCWDLAANQTM-- 401
+ W++ S ++P A + PV+ V W DG+ +A + V+ + + M
Sbjct: 397 KVWDL--SKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQ 454
Query: 402 --QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
++ AH V + C++T DKT+K WD T
Sbjct: 455 HLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAAT 495
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 32.3 bits (70), Expect = 0.20
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Frame = +3
Query: 237 RCWEVETSGKTVPKAAQPMDGPVLDV---AWHDDGTKVFMASTDKSVKCWDLAANQTM-- 401
+ W++ S ++P A + PV+ V W DG+ +A + V+ + + M
Sbjct: 397 KVWDL--SKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQ 454
Query: 402 --QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
++ AH V + C++T DKT+K WD T
Sbjct: 455 HLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAAT 495
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 31.9 bits (69), Expect = 0.27
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 297 GPVLDVAWHDDGTK--VFMASTDKSVKCWD-LAANQTMQVAAHDAPVKTCHWIKAPNYTC 467
G V D+A+ + V DK++K WD + N+ H+APV + + N
Sbjct: 465 GNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQF 524
Query: 468 LMTTSWDKTLKFW 506
+ +T+ D +K W
Sbjct: 525 IFSTAVDGKIKAW 537
Score = 31.1 bits (67), Expect = 0.47
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
Frame = +3
Query: 237 RCWEVETSGKTVPKA-AQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTM---- 401
+ W++ T + + A V V W DG + +A + V + + +
Sbjct: 399 KVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHL 458
Query: 402 QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
++ AH V + + C++T DKT+K WD T
Sbjct: 459 EIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVT 497
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 31.9 bits (69), Expect = 0.27
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 297 GPVLDVAWHDDGTK--VFMASTDKSVKCWD-LAANQTMQVAAHDAPVKTCHWIKAPNYTC 467
G V D+A+ + V DK++K WD + N+ H+APV + + N
Sbjct: 465 GNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQF 524
Query: 468 LMTTSWDKTLKFW 506
+ +T+ D +K W
Sbjct: 525 IFSTAVDGKIKAW 537
Score = 31.1 bits (67), Expect = 0.47
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
Frame = +3
Query: 237 RCWEVETSGKTVPKA-AQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTM---- 401
+ W++ T + + A V V W DG + +A + V + + +
Sbjct: 399 KVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHL 458
Query: 402 QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
++ AH V + + C++T DKT+K WD T
Sbjct: 459 EIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVT 497
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 31.9 bits (69), Expect = 0.27
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 273 PKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD-LAANQTMQVAAHDAPVKTCHWIK 449
P A+ V +A +D GT + T+K ++ WD +++M++ H V+ +
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVL-LLD 264
Query: 450 APNYTCLMTTSWDKTLKFWD 509
+ CL +S D ++ WD
Sbjct: 265 STGRFCLSGSS-DSMIRLWD 283
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 31.9 bits (69), Expect = 0.27
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 273 PKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD-LAANQTMQVAAHDAPVKTCHWIK 449
P A+ V +A +D GT + T+K ++ WD +++M++ H V+ +
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVL-LLD 264
Query: 450 APNYTCLMTTSWDKTLKFWD 509
+ CL +S D ++ WD
Sbjct: 265 STGRFCLSGSS-DSMIRLWD 283
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 31.5 bits (68), Expect = 0.36
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 DDGT-KVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHW-IKAPNYTCLMTTSWDKTL 497
+DGT K F +S DL T+Q A D V + + I PN L T S DK++
Sbjct: 372 EDGTVKGFDIRAAQSGSDSDLNPTYTIQAHAQDRGVSSISYNISTPNL--LATGSMDKSV 429
Query: 498 KFWD 509
K WD
Sbjct: 430 KLWD 433
Score = 30.3 bits (65), Expect = 0.82
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +3
Query: 351 STDKSVKCWDLAANQTMQVAAHDAPVKTCHWIK-APNYTCLMTTSWDK-TLKFWDT 512
S DKSVK WDL+ N+ +A H I A + L+ K L WDT
Sbjct: 424 SMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGELHVWDT 479
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +3
Query: 318 WHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTC--HWIKAPNYTCLMTTSWDK 491
W + D +++ WD + ++ + + K KA + + +T S DK
Sbjct: 183 WGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDK 242
Query: 492 TLKFWDTRT 518
T K WD RT
Sbjct: 243 TAKLWDMRT 251
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 31.1 bits (67), Expect = 0.47
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSG--KTVPKAAQPMDGPVLDVAWHDDGTKVF-MASTDKSVK 371
T L +GS DC V+ W + T+ A V V + + + S+D
Sbjct: 810 TKLASGSDDCSVKLWNINERNCLGTIRNIAN-----VCCVQFSPQSSHLLAFGSSDFRTY 864
Query: 372 CWDLAANQTMQ--VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
C+DL +T ++ H+ V ++ N T L+T S D TLK WD +
Sbjct: 865 CYDLRNLRTPWCILSGHNKAVSYAKFLD--NET-LVTASTDNTLKLWDLK 911
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 0.47
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Frame = +3
Query: 237 RCWEVETSGKTVPKAAQPMDGPVLDV---AWHDDGTKVFMASTDKSVKCWDLAANQTM-- 401
+ W++ S ++P A + PV+ V W DG+ +A + V+ + + M
Sbjct: 397 KVWDL--SKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQ 454
Query: 402 --QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
++ AH V + C+ T DKT+K WD T
Sbjct: 455 HLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAAT 495
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 0.47
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Frame = +3
Query: 237 RCWEVETSGKTVPKAAQPMDGPVLDV---AWHDDGTKVFMASTDKSVKCWDLAANQTM-- 401
+ W++ S ++P A + PV+ V W DG+ +A + V+ + + M
Sbjct: 397 KVWDL--SKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQ 454
Query: 402 --QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
++ AH V + C+ T DKT+K WD T
Sbjct: 455 HLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAAT 495
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 30.7 bits (66), Expect = 0.62
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 321 HDDGTKV---FMASTDKSVKC--WDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTS 482
H DG V ++A+ S +C +DL N + AHD V + AP L+++S
Sbjct: 416 HGDGASVSPSWIAAGFSSGQCRLFDLRENGFISSWRAHDGYVTK---LVAPESHLLVSSS 472
Query: 483 WDKTLKFWDTR 515
DKTL+ WD R
Sbjct: 473 LDKTLRIWDLR 483
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 30.3 bits (65), Expect = 0.82
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVA-AHDAPVKTCHWIKAPNYTCLMTT 479
VLD+ W D + S D S WD+ Q+ AH V+ W Y +++
Sbjct: 56 VLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSS 115
Query: 480 SWDKTLKFW 506
D+T + +
Sbjct: 116 --DRTCRIY 122
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 30.3 bits (65), Expect = 0.82
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVA-AHDAPVKTCHWIKAPNYTCLMTT 479
VLD+ W D + S D S WD+ Q+ AH V+ W Y +++
Sbjct: 115 VLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSS 174
Query: 480 SWDKTLKFW 506
D+T + +
Sbjct: 175 --DRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 30.3 bits (65), Expect = 0.82
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVA-AHDAPVKTCHWIKAPNYTCLMTT 479
VLD+ W D + S D S WD+ Q+ AH V+ W Y +++
Sbjct: 115 VLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSS 174
Query: 480 SWDKTLKFW 506
D+T + +
Sbjct: 175 --DRTCRIY 181
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 30.3 bits (65), Expect = 0.82
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 351 STDKSVKCWDLAANQTMQVAAHDAPVKTCHWIK-APNYTCLMTTSWDK-TLKFWDT 512
S D++VK WDL+ N+ +A H+ +I +P+ L+ LK WDT
Sbjct: 389 SKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWDT 444
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMAST-DKSVKCWDLA--------ANQTMQVAAHD-APVKTCHWIKA 452
V +AW F+ S D +VK +D+ +N + + HD A + I A
Sbjct: 322 VESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSYNISA 381
Query: 453 PNYTCLMTTSWDKTLKFWD 509
PN L T S D+T+K WD
Sbjct: 382 PNL--LATGSKDRTVKLWD 398
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 30.3 bits (65), Expect = 0.82
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEV-ETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
+++G+ D QV+ W + ET V M+ V V +H + S DKS++ WD
Sbjct: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNN-VSSVMFHAKQDIIVSNSEDKSIRVWDA 277
Query: 384 AANQTMQ 404
+Q
Sbjct: 278 TKRTGLQ 284
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 DGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCL 470
+GPV V +H+ D +K W+ ++ + + H ++T + Y +
Sbjct: 51 EGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQF--HHEYPWI 108
Query: 471 MTTSWDKTLKFWD 509
++ S D+T++ W+
Sbjct: 109 VSASDDQTIRIWN 121
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 30.3 bits (65), Expect = 0.82
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 198 HTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKV-FMASTDKSVKC 374
HT + AG+ D QVR ++ SG + DG V+ V W V + D +++
Sbjct: 160 HTLIAAGTEDVQVRLCDI-ASGAFSHTLSGHRDG-VMSVEWSTSSEWVLYTGGCDGAIRF 217
Query: 375 WDL 383
WD+
Sbjct: 218 WDI 220
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEV-ETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
+++G+ D QV+ W + ET V M+ V V +H + S DKS++ WD
Sbjct: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNN-VSSVMFHAKQDIIVSNSEDKSIRVWDA 277
Query: 384 AANQTMQ 404
+Q
Sbjct: 278 TKRTGIQ 284
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 198 HTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKV-FMASTDKSVKC 374
HT + AG+ D QVR ++ SG + DG V+ V W V + D +++
Sbjct: 160 HTLIAAGTDDVQVRLCDI-ASGAFSHTLSGHRDG-VMSVEWSTSSEWVLYTGGCDGAIRF 217
Query: 375 WDL 383
WD+
Sbjct: 218 WDI 220
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTS 482
+ D+ + +DG V +S D S++ WD+ + + D P+ +PN L T
Sbjct: 560 ITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGVHVDVPITALS--LSPNMDVLATAH 617
Query: 483 WDK 491
D+
Sbjct: 618 SDQ 620
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 258 SGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
+GKT+ + +D AWH DG + DK+ + WD+
Sbjct: 308 TGKTLETLSGHLDFSFAS-AWHPDGVTFSTGNQDKTCRVWDI 348
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 29.1 bits (62), Expect = 1.9
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPM----DGPVLDVAWHD 326
V+ ++F P T GS D R +++ T + + QP +GPV +A+
Sbjct: 189 VNTVKFFPDGYRFGT----GSDDGTCRLYDIRTGHQL--QVYQPHGDGENGPVTSIAFSV 242
Query: 327 DGTKVFMA-STDKSVKCWDLAANQT-----MQVAAHDAPVKTCHWIKAPNYTCLMTTSWD 488
G +F +++ + WD + +Q +H + +C + A + L T SWD
Sbjct: 243 SGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRI-SCLGLSADG-SALCTGSWD 300
Query: 489 KTLKFW 506
LK W
Sbjct: 301 SNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 29.1 bits (62), Expect = 1.9
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPM----DGPVLDVAWHD 326
V+ ++F P T GS D R +++ T + + QP +GPV +A+
Sbjct: 251 VNTVKFFPDGYRFGT----GSDDGTCRLYDIRTGHQL--QVYQPHGDGENGPVTSIAFSV 304
Query: 327 DGTKVFMA-STDKSVKCWDLAANQT-----MQVAAHDAPVKTCHWIKAPNYTCLMTTSWD 488
G +F +++ + WD + +Q +H + +C + A + L T SWD
Sbjct: 305 SGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRI-SCLGLSADG-SALCTGSWD 362
Query: 489 KTLKFW 506
LK W
Sbjct: 363 SNLKIW 368
>At2g43500.1 68415.m05405 RWP-RK domain-containing protein low
similarity to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 947
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +2
Query: 377 GLSSQPNDAGSGARRSSEDLPLDQSAQL 460
GLSS NDA ARRS ED+P D S +L
Sbjct: 696 GLSSLDNDAH--ARRSQEDMPDDTSFKL 721
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +3
Query: 159 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 338
V L + P S H+F+++ D V+ ++ S + D V ++++
Sbjct: 303 VEKLAWDPHSE--HSFVVSLK-DGTVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAPN 359
Query: 339 VFMA-STDKSVKCWDLAANQTMQVAAH 416
+ S D+SVK WDL+ NQ +A +
Sbjct: 360 LLATGSADESVKLWDLSNNQPSWIATN 386
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 28.7 bits (61), Expect = 2.5
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Frame = +3
Query: 225 DCQVRCWEVETSGK-TVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCW--DLAANQ 395
D RC +V T + + V + DG + A DK W D +
Sbjct: 627 DAVTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPK 686
Query: 396 TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
T + H A + + +P+ L T+S+DKT++ WD
Sbjct: 687 TT-LEEHTAMITDIRF--SPSQLRLATSSFDKTVRVWD 721
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +3
Query: 360 KSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 506
+S++ W+++ N+TM + AH+ + + A + + S DK +K W
Sbjct: 884 QSLELWNMSENKTMTLPAHEGLITSLAVSTATG--LVASASHDKLVKLW 930
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/95 (23%), Positives = 37/95 (38%)
Frame = +3
Query: 123 KDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP 302
K+V +P + + S +H + GS +V E+ T + +
Sbjct: 379 KEVVAVNPVQVSTLSFVVSNHYNAMHLAIGKGSGSFEVWKCEISTRKFEQIVSTNAHNQV 438
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQV 407
V +AW DG ++ S D V+ W L N +V
Sbjct: 439 VTGLAWSYDGRCLYSCSQDNYVRSWILCENAISEV 473
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +3
Query: 297 GPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHW 443
G V ++ G + STD SV+ W++ + ++V D + W
Sbjct: 424 GAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAW 472
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 204 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWH 323
++ +GS D VR WEVET G+ + K Q D ++ VAW+
Sbjct: 437 WIASGSTDGSVRMWEVET-GRCL-KVWQ-FDEAIMCVAWN 473
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 327 DGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVK 431
DG+++ AS+D +VK WD +Q P++
Sbjct: 358 DGSRIITASSDCTVKVWDSKTTDCLQTFKPPPPLR 392
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 258 SGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 383
+GKT+ + +D AWH DG + DK+ + WD+
Sbjct: 306 TGKTLATLSGHLDFSFAS-AWHPDGFTFSTGNQDKTCRVWDI 346
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 28.3 bits (60), Expect = 3.3
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMAS-TDKSVKCW-- 377
+ +D VR W++E G ++ A++P+ + +A TK+ +A TD + CW
Sbjct: 177 VFTSGYDSIVRMWDME-EGLSIA-ASKPLGCTIRALA---ADTKLLVAGGTDGFIHCWKS 231
Query: 378 --------DLAANQT----MQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 509
DL Q ++ H+ P+ + A + T + + SWD +++ WD
Sbjct: 232 LDGLRNLFDLTGFQKEKTEFRLWGHEGPITSL----ALDMTSIFSGSWDMSVRIWD 283
Score = 28.3 bits (60), Expect = 3.3
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +3
Query: 201 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKS-VKCW 377
T + +GSWD VR W+ +S K V K + D V +A H+ +AST S V W
Sbjct: 268 TSIFSGSWDMSVRIWD-RSSMKCV-KTLRHSDW-VWGLAPHE----TTLASTSGSDVYIW 320
Query: 378 DLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 515
D+++ + + T ++ L T D +K ++ R
Sbjct: 321 DVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIR 366
>At4g12350.1 68417.m01953 transcription factor, putative (MYB42)
identical to cDNA putative transcription factor (MYB42)
GI:5823330
Length = 168
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -3
Query: 72 STNQPTNQQFTLTNLFENTKTS 7
ST+QP N+ FT TNL + ++TS
Sbjct: 6 STHQPLNKVFTDTNLVDKSETS 27
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTV 272
LI+GS DC +R W++E SG +
Sbjct: 552 LISGSMDCTIRIWDLE-SGNVI 572
>At1g79090.2 68414.m09222 expressed protein 11408 (cDNA not
full-length)
Length = 793
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 381 SPNTSHFCLLKP*KPSSHHHARRHLG 304
SPN S F L+P PS HH + +H G
Sbjct: 229 SPNFSPFPNLQPQLPSMHHGSPQHTG 254
>At1g79090.1 68414.m09221 expressed protein 11408 (cDNA not
full-length)
Length = 793
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 381 SPNTSHFCLLKP*KPSSHHHARRHLG 304
SPN S F L+P PS HH + +H G
Sbjct: 229 SPNFSPFPNLQPQLPSMHHGSPQHTG 254
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 462 TCLMTTSWDKTLKFWDT 512
T L + SWD+TLK W T
Sbjct: 178 TLLYSVSWDRTLKIWRT 194
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCW 377
L +GSWD ++ W + S K + D V+ DD VF S D ++K W
Sbjct: 260 LYSGSWDKTLKVWRLSDS-KCLESIEAHDDAVNTVVSGFDD--LVFTGSADGTLKVW 313
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 303 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQ--VAAHDAPVKTCHWIKAPNYTCLMT 476
V +A DG+ ++ AS D+S K W + + + AHD + I + T
Sbjct: 195 VSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINA---IVVSKDGFVYT 251
Query: 477 TSWDKTLKFWDTR 515
S DK +K W+ +
Sbjct: 252 GSADKKIKVWNKK 264
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/81 (20%), Positives = 35/81 (43%)
Frame = +3
Query: 150 DDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDD 329
DD ++A+ S F+ GS D +++ W + ++ V +A +D
Sbjct: 235 DDAINAIVVSKDG-----FVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISED 289
Query: 330 GTKVFMASTDKSVKCWDLAAN 392
G ++ + D+S+ W+ N
Sbjct: 290 GKVLYSGACDRSILVWERLIN 310
>At5g12150.1 68418.m01426 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to glucocorticoid receptor DNA binding factor
1 [Canis familiaris] GI:23266717; contains Pfam profiles
PF00169: PH domain, PF00620: RhoGAP domain
Length = 827
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 72 KSTMFGSQISTGSNNPNKDVEVS--SPPDDTVSALEFSPPSVTLHTFLIA 215
+ST F +++ P KD+EVS SP ++ + + PSVT T L A
Sbjct: 465 ESTDFSARVKKHIEEPIKDIEVSSVSPTENCYQSGREAIPSVTPSTPLTA 514
>At4g38670.1 68417.m05475 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 281
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 410 GARRSSEDLPLDQSAQLHVPHDH 478
G+R+ LPL + +H+PH H
Sbjct: 257 GSRKDGATLPLVNKSMIHLPHPH 279
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 27.5 bits (58), Expect = 5.8
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD-L 383
L G +C V W S K +D V V W GT + + ++ +V+ WD L
Sbjct: 182 LAVGLGNC-VYLWNA-CSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDVL 239
Query: 384 AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 518
+ H V W + + L + S DK++ D RT
Sbjct: 240 RCKNIRTMEGHRLRVGALAW----SSSVLSSGSRDKSILQRDIRT 280
>At3g08840.3 68416.m01027 D-alanine--D-alanine ligase family similar
to D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase)
(Swiss-Prot:O51218) [Borrelia burgdorferi]; similar to
D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase).
(Swiss-Prot:P95803) [Streptococcus mutans]
Length = 845
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 242 TSHLAVPAASDQEGVQSDGGRRELEGRHGVIGRRGNLHVL 123
T + V + + Q+ + G RR +E GVIG+RG++H L
Sbjct: 780 TDEIIVSSKAKQQ-LSWKGRRRWVEMTVGVIGKRGSMHSL 818
>At3g08840.2 68416.m01026 D-alanine--D-alanine ligase family similar
to D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase)
(Swiss-Prot:O51218) [Borrelia burgdorferi]; similar to
D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase).
(Swiss-Prot:P95803) [Streptococcus mutans]
Length = 937
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 242 TSHLAVPAASDQEGVQSDGGRRELEGRHGVIGRRGNLHVL 123
T + V + + Q+ + G RR +E GVIG+RG++H L
Sbjct: 780 TDEIIVSSKAKQQ-LSWKGRRRWVEMTVGVIGKRGSMHSL 818
>At5g28600.1 68418.m03490 hypothetical protein
Length = 711
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 347 GFNRQKCEV-LG--LSSQPNDAGSGARRSSEDLPLDQ 448
GFNR K V G +S P D GS A + E +P+D+
Sbjct: 316 GFNRPKETVPTGNVSASNPGDLGSNATKREEVIPMDE 352
>At4g20910.1 68417.m03031 double-stranded RNA binding
protein-related / DsRBD protein-related contains weak
similarity to Pfam profile PF00035: Double-stranded RNA
binding motif
Length = 942
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 93 QISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVR 239
++ TGS NP+ + EV+ ++ +PP L GS ++R
Sbjct: 614 EVGTGSMNPHIESEVTQMTVGEYASFRMTPPDAAEALILAVGSDTVRIR 662
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +3
Query: 306 LDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSW 485
L +A DG + D+ V WD+ + +Q +C + + L + S+
Sbjct: 226 LALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRY-GTSELYSGSF 284
Query: 486 DKTLKFWD 509
D+T+K W+
Sbjct: 285 DRTVKVWN 292
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCW 377
L +GSWD + W V S ++ + V V DG VF S D +VK W
Sbjct: 226 LYSGSWDKTFKVWRV--SDLRCVESVNAHEDAVNAVVSGFDGL-VFTGSADGTVKVW 279
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 207 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCW 377
L +GSWD ++ W + S K + ++ Q D + VA D +F S D ++K W
Sbjct: 264 LYSGSWDKTLKVWRLSDS-KCL-ESIQAHDDAINTVAAGFDDL-LFTGSADGTLKVW 317
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +3
Query: 294 DGPVLDVAWHDDGTKVFMASTDKSVKCWDL--AANQTMQVAAHDAPVKTCHWIKAPNYTC 467
D P+ + DG + S K W++ N+ + + H V + + C
Sbjct: 63 DRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDD-EC 121
Query: 468 LMTTSWDKTLKFWDT 512
L T S D+T K W T
Sbjct: 122 LATASTDRTEKIWKT 136
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,316,478
Number of Sequences: 28952
Number of extensions: 272335
Number of successful extensions: 1277
Number of sequences better than 10.0: 151
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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