BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS305B01f (521 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 43 2e-04 01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780,398... 41 7e-04 02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313... 37 0.011 08_02_1332 + 26207164-26207257,26207454-26207530,26207771-262078... 34 0.080 01_06_1061 - 34169469-34169624,34170837-34170938,34171029-341711... 30 0.98 08_01_0281 - 2290348-2290637,2290846-2291032 29 2.3 04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 28 5.2 03_06_0670 + 35434203-35434355,35436601-35436729,35436978-354384... 27 6.9 05_03_0674 - 16842301-16842320,16842651-16842714,16842843-168429... 27 9.1 >09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579, 3973665-3973982,3974565-3974763,3974937-3975202, 3975288-3975574,3976714-3977818,3977900-3978046, 3978146-3978226,3978315-3978540,3978622-3978761, 3979539-3979645,3979739-3979841 Length = 3638 Score = 42.7 bits (96), Expect = 2e-04 Identities = 18/41 (43%), Positives = 26/41 (63%) Frame = +3 Query: 75 AEIQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAED 197 + I T++EMGF + RAE+AL VE A +WL +H E+ Sbjct: 1208 SSIATIVEMGFSRARAEEALRSVRTNSVEMATDWLFSHPEE 1248 >01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780, 3986854-3987190,3987602-3987603,3987661-3987743, 3988017-3988116,3988330-3988463,3988711-3988788, 3989333-3989387,3990159-3990239,3990369-3990567, 3990609-3990699,3990770-3990892,3991440-3991528, 3992450-3992539,3992619-3992792,3992911-3993035, 3993246-3993372,3993826-3993998 Length = 816 Score = 40.7 bits (91), Expect = 7e-04 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = +3 Query: 81 IQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAEDLAVSSEPS-NSQAGESS 245 + L MGF +KA T+ GVE AM WLL+H +D ++ S +SQA E + Sbjct: 636 VSQLASMGFNYLHCQKAAISTSNTGVEEAMNWLLSHMDDPDINDPISKDSQAAEQT 691 Score = 39.1 bits (87), Expect = 0.002 Identities = 22/56 (39%), Positives = 33/56 (58%) Frame = +3 Query: 60 QT*IMAEIQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAEDLAVSSEPSNS 227 QT +QTL+ GF ++ A KALA + +E A +W+ +H E A SS P++S Sbjct: 690 QTVDETSVQTLVSFGFQEDVARKALAASG-GNIERATDWIFSHPE--AFSSVPTDS 742 >02_03_0351 + 18030656-18030823,18030963-18031113,18031214-18031309, 18032027-18032103,18032627-18032706,18033216-18033276, 18034153-18034220,18034312-18034393,18034552-18034638, 18035009-18035086,18035336-18035455,18035554-18035730 Length = 414 Score = 36.7 bits (81), Expect = 0.011 Identities = 13/29 (44%), Positives = 21/29 (72%) Frame = +3 Query: 315 SLKCDECGKLFKNQDEIEYHAAKTNHSSF 401 SL+C +CG L ++ +E + HA TNH++F Sbjct: 5 SLRCGDCGVLLRSVEEAQAHAEATNHANF 33 Score = 31.9 bits (69), Expect = 0.32 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +3 Query: 315 SLKCDECGKLFKNQDEIEYHAAKTNHSSF 401 +L C CGK ++Q E++ H +T H+ F Sbjct: 42 NLVCAACGKPCRSQTEVDLHTKRTGHTEF 70 Score = 31.1 bits (67), Expect = 0.56 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +3 Query: 99 MGFPKERAEKALAVTNYKGVEPAMEWLLAHAED 197 MGF RA +AL + +E A+ WL H ED Sbjct: 124 MGFTTARATRALHFSGNSTIEGAINWLSEHQED 156 >08_02_1332 + 26207164-26207257,26207454-26207530,26207771-26207841, 26208448-26208502,26209066-26209187,26209272-26209353, 26210070-26210160,26210759-26210982,26211294-26211413, 26211523-26211705 Length = 372 Score = 33.9 bits (74), Expect = 0.080 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +3 Query: 99 MGFPKERAEKALAVTNYKGVEPAMEWLLAHAEDLAVSSEP 218 MGFP R+ +AL + +E A+ WLL H D + P Sbjct: 17 MGFPTARSIRALHFSGNSSLESAINWLLEHENDPDIDQLP 56 >01_06_1061 - 34169469-34169624,34170837-34170938,34171029-34171180, 34172087-34172153,34172239-34172419,34172655-34172778, 34174775-34174871,34175929-34176331,34176729-34176888, 34177412-34177486,34177714-34177892,34178224-34178303, 34178561-34179322 Length = 845 Score = 30.3 bits (65), Expect = 0.98 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +3 Query: 75 AEIQTLIEMGFPKERAEKALAVTNY 149 + I TL+ MGF + A +ALA+TNY Sbjct: 806 SSIATLVSMGFDRGSAIRALALTNY 830 >08_01_0281 - 2290348-2290637,2290846-2291032 Length = 158 Score = 29.1 bits (62), Expect = 2.3 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -3 Query: 201 RGPRREPKATPWQALHP 151 R PRR+ PWQA+HP Sbjct: 88 RRPRRQHHGRPWQAIHP 104 >04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-907968 Length = 511 Score = 27.9 bits (59), Expect = 5.2 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = +3 Query: 324 CDECGKLFKNQDEIEYHAA 380 C +CG++F D +E+H A Sbjct: 243 CSQCGEVFNKADSLEHHQA 261 >03_06_0670 + 35434203-35434355,35436601-35436729,35436978-35438409, 35438524-35439014 Length = 734 Score = 27.5 bits (58), Expect = 6.9 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = +2 Query: 350 KSR*D*VPRRKNESQ*FLRVY*RKKTIN*RGKEGATGAPRRENE 481 KSR D V R +NE + N RG+EG + AP ENE Sbjct: 182 KSREDLVTRTQNEKGTTNQSVQNFSVSNQRGREGFSAAPALENE 225 >05_03_0674 - 16842301-16842320,16842651-16842714,16842843-16842983, 16843382-16843515,16844437-16844501,16844886-16844923, 16845029-16845148,16846129-16846458 Length = 303 Score = 27.1 bits (57), Expect = 9.1 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = -3 Query: 111 WENPSRSMSVFLPLFKFANSMFIVKLATFY 22 W++ S + VFL L +F N++ ++ L +Y Sbjct: 224 WDSMSGARHVFLLLCQFVNNLEVIHLPVYY 253 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,228,528 Number of Sequences: 37544 Number of extensions: 174057 Number of successful extensions: 416 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 407 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 416 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1142636160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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