Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305B01f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   3.6  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   8.2  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   8.2  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 312 KSLKCDECGKLFKNQDEIEYH 374
           K  KCD+C + F+ +  ++ H
Sbjct: 381 KPYKCDQCAQTFRQKQLLKRH 401


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 186 HAEDLAVSSEPSNSQAGESSAP 251
           H E +  + EPS ++A E  +P
Sbjct: 31  HGETVPATPEPSTTEATEEESP 52


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 405 LRNYCDSFLRRGTQSHLDF*TASHIRRILK 316
           +RNY    + RG         AS+IRRI K
Sbjct: 657 VRNYLGIRIERGQNGEYLLDQASYIRRIAK 686


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,125
Number of Sequences: 2352
Number of extensions: 6185
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)