Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305B01f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069272-1|AAL39417.1| 331|Drosophila melanogaster GM09977p pro... 107 7e-24
AE014296-1353|AAF50499.1| 331|Drosophila melanogaster CG8209-PA... 107 7e-24
AY071423-1|AAL49045.1| 330|Drosophila melanogaster RE50471p pro... 101 8e-22
AY051411-1|AAK92835.1| 751|Drosophila melanogaster GH09153p pro... 57 1e-08
AE014297-3430|AAF56217.1| 751|Drosophila melanogaster CG13604-P... 57 1e-08
AY121697-1|AAM52024.1| 827|Drosophila melanogaster RE70722p pro... 38 0.006
AE014296-568|AAF47720.1| 827|Drosophila melanogaster CG12082-PA... 38 0.006
DQ138788-1|ABA86394.1| 822|Drosophila melanogaster CG10321 prot... 36 0.044
BT003241-1|AAO24998.1| 835|Drosophila melanogaster LD45439p pro... 36 0.044
AE013599-3239|AAF46742.1| 835|Drosophila melanogaster CG10321-P... 36 0.044
AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein. 34 0.13
AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair p... 34 0.13
AE014135-61|AAN06526.1| 343|Drosophila melanogaster CG1836-PB, ... 34 0.13
AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA, ... 34 0.13
BT015225-1|AAT94454.1| 1129|Drosophila melanogaster RE23320p pro... 29 3.8
BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p pro... 29 3.8
AE014296-98|AAF47384.1| 941|Drosophila melanogaster CG1233-PA, ... 29 3.8
AE014296-97|AAG22219.2| 1129|Drosophila melanogaster CG1233-PB, ... 29 3.8
AY051681-1|AAK93105.1| 777|Drosophila melanogaster LD23102p pro... 29 5.1
AF035275-1|AAB87630.1| 777|Drosophila melanogaster zinc finger ... 29 5.1
AE014134-1687|AAF52805.2| 777|Drosophila melanogaster CG3998-PA... 29 5.1
BT022744-1|AAY55160.1| 368|Drosophila melanogaster IP14605p pro... 28 6.7
AY071702-1|AAL49324.2| 244|Drosophila melanogaster RH17388p pro... 28 6.7
AE014296-2153|AAF49908.2| 386|Drosophila melanogaster CG10654-P... 28 6.7
BT024237-1|ABC86299.1| 751|Drosophila melanogaster LD02865p pro... 28 8.8
BT022178-1|AAY51572.1| 513|Drosophila melanogaster IP01252p pro... 28 8.8
BT021961-1|AAX94782.2| 492|Drosophila melanogaster LD14646p pro... 28 8.8
AY118677-1|AAM50537.1| 614|Drosophila melanogaster AT07671p pro... 28 8.8
AY051809-1|AAK93233.1| 350|Drosophila melanogaster LD32068p pro... 28 8.8
AE014297-3811|AAF56476.1| 614|Drosophila melanogaster CG5111-PA... 28 8.8
AE014296-240|AAF47485.1| 724|Drosophila melanogaster CG2199-PA,... 28 8.8
AE014296-239|AAN11474.1| 733|Drosophila melanogaster CG2199-PB,... 28 8.8
AE014134-3056|AAF53772.2| 513|Drosophila melanogaster CG17568-P... 28 8.8
AE014134-726|AAN10344.1| 618|Drosophila melanogaster CG17612-PB... 28 8.8
AE014134-725|AAF51023.1| 618|Drosophila melanogaster CG17612-PA... 28 8.8
>AY069272-1|AAL39417.1| 331|Drosophila melanogaster GM09977p
protein.
Length = 331
Score = 107 bits (258), Expect = 7e-24
Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 6/116 (5%)
Frame = +3
Query: 72 MAEIQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAEDLAVSSEPSNSQAGESSAP 251
M+E+QTL++MGFP+ER E AL VT+ KGVEPAMEWLLAH +D S + + G ++ P
Sbjct: 1 MSEVQTLMDMGFPRERVEYALEVTSNKGVEPAMEWLLAHVDDPIPSRQGAGESPGSTAQP 60
Query: 252 V------XXXXXXXXXXXXXXXXXXXKSLKCDECGKLFKNQDEIEYHAAKTNHSSF 401
KSLKCDECGK+ ++ E+EYHAAKT H+ F
Sbjct: 61 AAAVDSSAAAASSSTSGAGETSAPVAKSLKCDECGKVLRDHTEVEYHAAKTGHTKF 116
>AE014296-1353|AAF50499.1| 331|Drosophila melanogaster CG8209-PA
protein.
Length = 331
Score = 107 bits (258), Expect = 7e-24
Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 6/116 (5%)
Frame = +3
Query: 72 MAEIQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAEDLAVSSEPSNSQAGESSAP 251
M+E+QTL++MGFP+ER E AL VT+ KGVEPAMEWLLAH +D S + + G ++ P
Sbjct: 1 MSEVQTLMDMGFPRERVEYALEVTSNKGVEPAMEWLLAHVDDPIPSRQGAGESPGSTAQP 60
Query: 252 V------XXXXXXXXXXXXXXXXXXXKSLKCDECGKLFKNQDEIEYHAAKTNHSSF 401
KSLKCDECGK+ ++ E+EYHAAKT H+ F
Sbjct: 61 AAAVDSSAAAASSSTSGAGETSAPVAKSLKCDECGKVLRDHTEVEYHAAKTGHTKF 116
>AY071423-1|AAL49045.1| 330|Drosophila melanogaster RE50471p
protein.
Length = 330
Score = 101 bits (241), Expect = 8e-22
Identities = 52/116 (44%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Frame = +3
Query: 72 MAEIQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAEDLAVSSEPSNSQAGESSAP 251
M+E+QTL++MGFP+ER E AL VT+ KGVEPAMEWLLAH +D S + + G ++ P
Sbjct: 1 MSEVQTLMDMGFPRERVEYALEVTSNKGVEPAMEWLLAHVDDPIPSRQGAGESPGSTAQP 60
Query: 252 V------XXXXXXXXXXXXXXXXXXXKSLKCDECGKLFKNQDEIEYHAAKTNHSSF 401
KSLKCDEC K+ ++ E+EYHAAKT H+ F
Sbjct: 61 AAAVDSSAAAASSSTSGAGETSAPVAKSLKCDEC-KVLRDHTEVEYHAAKTGHTKF 115
>AY051411-1|AAK92835.1| 751|Drosophila melanogaster GH09153p
protein.
Length = 751
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +3
Query: 72 MAEIQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAED 197
+ +QTL++MGFP+ RAEKALA T +GV+ A +WLLAH D
Sbjct: 22 LTPLQTLLQMGFPRHRAEKALASTGNRGVQIASDWLLAHVND 63
>AE014297-3430|AAF56217.1| 751|Drosophila melanogaster CG13604-PA
protein.
Length = 751
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +3
Query: 72 MAEIQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAED 197
+ +QTL++MGFP+ RAEKALA T +GV+ A +WLLAH D
Sbjct: 22 LTPLQTLLQMGFPRHRAEKALASTGNRGVQIASDWLLAHVND 63
>AY121697-1|AAM52024.1| 827|Drosophila melanogaster RE70722p
protein.
Length = 827
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 75 AEIQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAEDLAVSSEP---SNSQAGESS 245
A + L+ MGFP E ++A T G+E A WL+ H D + SEP N+ G+ +
Sbjct: 632 AVMSELLTMGFPPEACKRACYHTKNSGLEAASNWLMEHIADEDI-SEPFVVPNNSIGDCA 690
Query: 246 A 248
A
Sbjct: 691 A 691
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 90 LIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAEDLAV--SSEPSNSQAGESSA 248
L+ MGF + +A AL T+ VE A +W+ +HA+ + V ++ +NS A +S+
Sbjct: 704 LMSMGFDERQAVAALKATD-GNVERATDWIFSHADSIGVEDAAPAANSSAAAASS 757
>AE014296-568|AAF47720.1| 827|Drosophila melanogaster CG12082-PA
protein.
Length = 827
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 75 AEIQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAEDLAVSSEP---SNSQAGESS 245
A + L+ MGFP E ++A T G+E A WL+ H D + SEP N+ G+ +
Sbjct: 632 AVMSELLTMGFPPEACKRACYHTKNSGLEAASNWLMEHIADEDI-SEPFVVPNNSIGDCA 690
Query: 246 A 248
A
Sbjct: 691 A 691
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 90 LIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAEDLAV--SSEPSNSQAGESSA 248
L+ MGF + +A AL T+ VE A +W+ +HA+ + V ++ +NS A +S+
Sbjct: 704 LMSMGFDERQAVAALKATD-GNVERATDWIFSHADSIGVEDAAPAANSSAAAASS 757
>DQ138788-1|ABA86394.1| 822|Drosophila melanogaster CG10321
protein.
Length = 822
Score = 35.5 bits (78), Expect = 0.044
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 321 KCDECGKLFKNQDEIEYHAAKTNHSS 398
KC ECG L+ N D ++ H T+HS+
Sbjct: 742 KCGECGSLYDNVDSLQLHVESTDHSA 767
>BT003241-1|AAO24998.1| 835|Drosophila melanogaster LD45439p
protein.
Length = 835
Score = 35.5 bits (78), Expect = 0.044
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 321 KCDECGKLFKNQDEIEYHAAKTNHSS 398
KC ECG L+ N D ++ H T+HS+
Sbjct: 749 KCGECGSLYDNVDSLQLHVESTDHSA 774
>AE013599-3239|AAF46742.1| 835|Drosophila melanogaster CG10321-PA
protein.
Length = 835
Score = 35.5 bits (78), Expect = 0.044
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 321 KCDECGKLFKNQDEIEYHAAKTNHSS 398
KC ECG L+ N D ++ H T+HS+
Sbjct: 749 KCGECGSLYDNVDSLQLHVESTDHSA 774
>AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein.
Length = 414
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/34 (38%), Positives = 26/34 (76%)
Frame = +3
Query: 81 IQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLL 182
+ +++EMG+P+E+ E+A+A +Y E A+E+L+
Sbjct: 163 VLSMVEMGYPREQVERAMA-ASYNNPERAVEYLI 195
>AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair
protein Rad23 protein.
Length = 414
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/34 (38%), Positives = 26/34 (76%)
Frame = +3
Query: 81 IQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLL 182
+ +++EMG+P+E+ E+A+A +Y E A+E+L+
Sbjct: 163 VLSMVEMGYPREQVERAMA-ASYNNPERAVEYLI 195
>AE014135-61|AAN06526.1| 343|Drosophila melanogaster CG1836-PB,
isoform B protein.
Length = 343
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/34 (38%), Positives = 26/34 (76%)
Frame = +3
Query: 81 IQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLL 182
+ +++EMG+P+E+ E+A+A +Y E A+E+L+
Sbjct: 92 VLSMVEMGYPREQVERAMA-ASYNNPERAVEYLI 124
>AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA,
isoform A protein.
Length = 414
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/34 (38%), Positives = 26/34 (76%)
Frame = +3
Query: 81 IQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLL 182
+ +++EMG+P+E+ E+A+A +Y E A+E+L+
Sbjct: 163 VLSMVEMGYPREQVERAMA-ASYNNPERAVEYLI 195
>BT015225-1|AAT94454.1| 1129|Drosophila melanogaster RE23320p
protein.
Length = 1129
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 312 KSLKCDECGKLFKNQDEIEYH 374
++ KC++CGK FKN +++ H
Sbjct: 886 RNYKCEQCGKGFKNTKQLKNH 906
>BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p protein.
Length = 1100
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 312 KSLKCDECGKLFKNQDEIEYH 374
++ KC++CGK FKN +++ H
Sbjct: 948 RNYKCEQCGKGFKNTKQLKNH 968
>AE014296-98|AAF47384.1| 941|Drosophila melanogaster CG1233-PA,
isoform A protein.
Length = 941
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 312 KSLKCDECGKLFKNQDEIEYH 374
++ KC++CGK FKN +++ H
Sbjct: 698 RNYKCEQCGKGFKNTKQLKNH 718
>AE014296-97|AAG22219.2| 1129|Drosophila melanogaster CG1233-PB,
isoform B protein.
Length = 1129
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 312 KSLKCDECGKLFKNQDEIEYH 374
++ KC++CGK FKN +++ H
Sbjct: 886 RNYKCEQCGKGFKNTKQLKNH 906
>AY051681-1|AAK93105.1| 777|Drosophila melanogaster LD23102p
protein.
Length = 777
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 321 KCDECGKLFKNQDEIEYHAAKTNHSSF 401
+CD+CGK FK + + + H KT H+ +
Sbjct: 602 QCDKCGKTFKVKAQYKSH-LKTRHTDY 627
>AF035275-1|AAB87630.1| 777|Drosophila melanogaster zinc finger 30C
protein.
Length = 777
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 321 KCDECGKLFKNQDEIEYHAAKTNHSSF 401
+CD+CGK FK + + + H KT H+ +
Sbjct: 602 QCDKCGKTFKVKAQYKSH-LKTRHTDY 627
>AE014134-1687|AAF52805.2| 777|Drosophila melanogaster CG3998-PA
protein.
Length = 777
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 321 KCDECGKLFKNQDEIEYHAAKTNHSSF 401
+CD+CGK FK + + + H KT H+ +
Sbjct: 602 QCDKCGKTFKVKAQYKSH-LKTRHTDY 627
>BT022744-1|AAY55160.1| 368|Drosophila melanogaster IP14605p
protein.
Length = 368
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 318 LKCDECGKLFKNQDEIEYHAAK 383
L+C +CG++F+N E+ H K
Sbjct: 339 LRCRKCGRIFQNSVELNAHGRK 360
>AY071702-1|AAL49324.2| 244|Drosophila melanogaster RH17388p
protein.
Length = 244
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 318 LKCDECGKLFKNQDEIEYHAAK 383
L+C +CG++F+N E+ H K
Sbjct: 215 LRCRKCGRIFQNSVELNAHGRK 236
>AE014296-2153|AAF49908.2| 386|Drosophila melanogaster CG10654-PA
protein.
Length = 386
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 318 LKCDECGKLFKNQDEIEYHAAK 383
L+C +CG++F+N E+ H K
Sbjct: 357 LRCRKCGRIFQNSVELNAHGRK 378
>BT024237-1|ABC86299.1| 751|Drosophila melanogaster LD02865p
protein.
Length = 751
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 315 SLKCDECGKLFKNQDEIEYHAAK 383
+L CD CGK K++ ++ H K
Sbjct: 670 TLSCDRCGKFVKSRQRLDSHMEK 692
>BT022178-1|AAY51572.1| 513|Drosophila melanogaster IP01252p
protein.
Length = 513
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 312 KSLKCDECGKLFKNQDEIEYH 374
+ LKCD CG LFK ++ H
Sbjct: 422 RRLKCDVCGALFKRSKTLKTH 442
>BT021961-1|AAX94782.2| 492|Drosophila melanogaster LD14646p
protein.
Length = 492
Score = 27.9 bits (59), Expect = 8.8
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +3
Query: 321 KCDECGKLFKNQDEIEYHAAKTN 389
KC +C K F++Q+ +++H K++
Sbjct: 449 KCHKCSKFFESQNYLDFHFKKSH 471
>AY118677-1|AAM50537.1| 614|Drosophila melanogaster AT07671p
protein.
Length = 614
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 78 EIQTLIEMGFPKERAEKALAVTNYKG-VEPAMEWLLAHAEDLAVSSEPSNSQA 233
E+ TL+EMG+ E ++ LA+ + G V+ A++++ +E +S E NS A
Sbjct: 356 ELSTLVEMGY--EESDARLALRSCAGQVDRAIQYIQERSE--RISEERKNSAA 404
>AY051809-1|AAK93233.1| 350|Drosophila melanogaster LD32068p
protein.
Length = 350
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 315 SLKCDECGKLFKNQDEIEYHAAK 383
+L CD CGK K++ ++ H K
Sbjct: 269 TLSCDRCGKFVKSRQRLDSHMEK 291
>AE014297-3811|AAF56476.1| 614|Drosophila melanogaster CG5111-PA
protein.
Length = 614
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 78 EIQTLIEMGFPKERAEKALAVTNYKG-VEPAMEWLLAHAEDLAVSSEPSNSQA 233
E+ TL+EMG+ E ++ LA+ + G V+ A++++ +E +S E NS A
Sbjct: 356 ELSTLVEMGY--EESDARLALRSCAGQVDRAIQYIQERSE--RISEERKNSAA 404
>AE014296-240|AAF47485.1| 724|Drosophila melanogaster CG2199-PA,
isoform A protein.
Length = 724
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 315 SLKCDECGKLFKNQDEIEYHAAK 383
+L CD CGK K++ ++ H K
Sbjct: 643 TLSCDRCGKFVKSRQRLDSHMEK 665
>AE014296-239|AAN11474.1| 733|Drosophila melanogaster CG2199-PB,
isoform B protein.
Length = 733
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 315 SLKCDECGKLFKNQDEIEYHAAK 383
+L CD CGK K++ ++ H K
Sbjct: 652 TLSCDRCGKFVKSRQRLDSHMEK 674
>AE014134-3056|AAF53772.2| 513|Drosophila melanogaster CG17568-PA
protein.
Length = 513
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 312 KSLKCDECGKLFKNQDEIEYH 374
+ LKCD CG LFK ++ H
Sbjct: 422 RRLKCDVCGALFKRSKTLKTH 442
>AE014134-726|AAN10344.1| 618|Drosophila melanogaster CG17612-PB,
isoform B protein.
Length = 618
Score = 27.9 bits (59), Expect = 8.8
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +3
Query: 321 KCDECGKLFKNQDEIEYHAAKTN 389
KC +C K F++Q+ +++H K++
Sbjct: 446 KCHKCSKFFESQNYLDFHFKKSH 468
>AE014134-725|AAF51023.1| 618|Drosophila melanogaster CG17612-PA,
isoform A protein.
Length = 618
Score = 27.9 bits (59), Expect = 8.8
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +3
Query: 321 KCDECGKLFKNQDEIEYHAAKTN 389
KC +C K F++Q+ +++H K++
Sbjct: 446 KCHKCSKFFESQNYLDFHFKKSH 468
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,263,789
Number of Sequences: 53049
Number of extensions: 293222
Number of successful extensions: 1593
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1586
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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