Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305A12f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 37 0.002
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 37 0.002
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 34 0.015
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 33 0.034
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe... 32 0.045
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 31 0.079
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 31 0.079
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 31 0.14
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 31 0.14
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 31 0.14
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 30 0.24
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 29 0.42
SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces ... 29 0.42
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.56
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 29 0.56
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 28 0.73
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 28 0.73
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 0.73
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 0.97
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 0.97
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 27 1.3
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit... 27 1.3
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 1.3
SPAC11H11.05c |fta6|sma6|Sim4 and Mal2 associated |Schizosacchar... 27 1.7
SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|ch... 27 1.7
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 27 1.7
SPBC1347.03 |meu14||sporulation protein Meu14|Schizosaccharomyce... 27 1.7
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.2
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 27 2.2
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 27 2.2
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 27 2.2
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 3.0
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 26 3.0
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 26 3.0
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 26 3.0
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 26 3.9
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 26 3.9
SPBC1861.02 |abp2||ARS binding protein Abp2|Schizosaccharomyces ... 26 3.9
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.9
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 3.9
SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4... 26 3.9
SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subun... 26 3.9
SPAC29E6.04 |nnf1|SPAC30.08|kinetochore protein Nnf1|Schizosacch... 25 5.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 5.2
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 25 5.2
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 6.8
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 25 6.8
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 25 6.8
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 25 6.8
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 25 6.8
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 25 6.8
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 25 6.8
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 25 6.8
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 25 6.8
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 6.8
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 25 9.0
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 25 9.0
SPBC18H10.15 |ppk23||serine/threonine protein kinase Ppk23|Schiz... 25 9.0
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 25 9.0
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.0
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 25 9.0
SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|... 25 9.0
SPBC13A2.02 |||nucleoporin Nup82|Schizosaccharomyces pombe|chr 2... 25 9.0
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +3
Query: 216 AENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEK 395
++ L +E + I +D+++++ YEQ + L ++ + + LKE + EN KT EK
Sbjct: 834 SDTRLRLERMHKFIEKDQESIDNYEQNREALESEVATAEAELELLKE-DFASENSKT-EK 891
Query: 396 QLIVLKNK 419
L+ K
Sbjct: 892 ILLAASEK 899
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 37.1 bits (82), Expect = 0.002
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = +3
Query: 207 HKQAENELNIEECQQEINEDEKAVEQYEQEMD----ELSQKITKLQKQTA-KLKEKEMIE 371
H + EN+L +++ ++ I+E E AV++YE E E +KI+ L+ + KL E +M+
Sbjct: 341 HIEYENDLTVKKLKRRISELEMAVKEYESEKSYSEKEYEEKISSLRIELEDKLAEIDMLR 400
Query: 372 ENLKTKEKQLIVLKNKHKTALMELLGNVPEKDFAVTINKFECEVR 506
L KE+ ++ L + + ++ +K+ N E + R
Sbjct: 401 NKL-LKEEHKHHSTSEKLEELSKYVASIQDKERNNGQNALELQAR 444
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 33.9 bits (74), Expect = 0.015
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +3
Query: 210 KQAENELNIEECQQEINEDE---KAVEQYEQEMDELSQKITKLQKQT-AKLKEKEMIEEN 377
K A++ + ++E +Q + + K + + QE++ Q ITK K T +KL++ ++ N
Sbjct: 589 KLAKSVMQLKENEQNFSSLDTSFKKLNESHQELENNHQTITKQLKDTSSKLQQLQLERAN 648
Query: 378 LKTKEKQLIVLKNKHKTALMEL 443
+ KE L N +T L++L
Sbjct: 649 FEQKESTLSDENNDLRTKLLKL 670
Score = 33.5 bits (73), Expect = 0.020
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +3
Query: 240 ECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEK-EMIEENLKTKEKQLIVLKN 416
E + I+ E+ E+ ++E+ ELS ++ Q T KLK + + + + ++ KE VLK
Sbjct: 1359 EMTENIHSLEEGKEETKKEIAELSSRLEDNQLATNKLKNQLDHLNQEIRLKED---VLKE 1415
Query: 417 KHK--TALMELLGNVPEKDFAVTINKFECE 500
K +L E L N +K+ ++ K E E
Sbjct: 1416 KESLIISLEESLSNQRQKESSLLDAKNELE 1445
Score = 27.1 bits (57), Expect = 1.7
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Frame = +3
Query: 219 ENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMI--EENL---K 383
E + I E + +++ A + + ++D L+Q+I +L++ K KE +I EE+L +
Sbjct: 1373 ETKKEIAELSSRLEDNQLATNKLKNQLDHLNQEI-RLKEDVLKEKESLIISLEESLSNQR 1431
Query: 384 TKEKQLIVLKN----------KHKTALMELLGNV 455
KE L+ KN + ++LME + ++
Sbjct: 1432 QKESSLLDAKNELEHMLDDTSRKNSSLMEKIESI 1465
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 288 EQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEK 395
E + +L +K+T Q++ + LKE+ M + T K
Sbjct: 940 ESKSSDLGKKLTARQEEISNLKEENMSQSQAITSVK 975
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 32.7 bits (71), Expect = 0.034
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 228 LNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEK--EMIEENLKTKEKQL 401
LN Q I+ +E + ++ + + +TK+ K+ + KE E++E NLKT K
Sbjct: 371 LNATPGSQFISAEEMNQKYISEQTQLVEEALTKVMKEKYREKENNLELLETNLKTHHKDY 430
Query: 402 IVLKNKHKTALME 440
K TAL E
Sbjct: 431 KHALKKRITALEE 443
>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 32.3 bits (70), Expect = 0.045
Identities = 20/75 (26%), Positives = 43/75 (57%)
Frame = +3
Query: 222 NELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQL 401
N++ ++E +QE ++ ++ V + Q EL I ++ KQ K+K ++++ + + +
Sbjct: 645 NQIYLKEERQENSDVQEQVVRDRQF--ELQASIVRVMKQKEKMKHDDLVQYVINNVKDRG 702
Query: 402 IVLKNKHKTALMELL 446
I L + KTA+ +LL
Sbjct: 703 IPLVSDVKTAIEKLL 717
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 31.5 bits (68), Expect = 0.079
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +3
Query: 225 ELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKE----KEMIEENLKTKE 392
E +I E Q+ +E ++ +EQ + L +K + ++Q K +E KE++E+ K KE
Sbjct: 92 EQSITESQRIFSEKQR-LEQERFNRELLEKKRIEAERQRLKDEEERRKKELMEKEKKEKE 150
Query: 393 KQLIVLKNKHK 425
+ ++ + KHK
Sbjct: 151 RIRLIEEQKHK 161
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 31.5 bits (68), Expect = 0.079
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = +3
Query: 207 HKQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKT 386
++ +NE+ + +EDE+A + Y+ + LS++ K Q++ + +KE E+
Sbjct: 67 YQDPDNEVALFATAPYDHEDEEADKIYQSVEEHLSKR-RKSQREKQEQLQKEKYEKENPK 125
Query: 387 KEKQLIVLKNKHKTALMELLGNVPE 461
Q LK T E N+PE
Sbjct: 126 VSSQFADLKRGLSTLTDEDWNNIPE 150
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 30.7 bits (66), Expect = 0.14
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +3
Query: 210 KQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTK 389
K E + EE +Q I E+E + + E+ + E + + +K+ A+LK+KE + +
Sbjct: 252 KMLEEKRAREEEEQRIREEEARIAEEEKRLAE----VEEARKEEARLKKKEKERKKKEEM 307
Query: 390 EKQLIVLKNKHK 425
+ Q L K K
Sbjct: 308 KAQGKYLSKKQK 319
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 30.7 bits (66), Expect = 0.14
Identities = 14/62 (22%), Positives = 34/62 (54%)
Frame = +3
Query: 234 IEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQLIVLK 413
+EE QE+ + ++ + + +E D+ + + KL +T +E E E+ ++ E+ + + K
Sbjct: 541 VEEITQELQDTKEVLSKSSKESDDYEEVVGKL--RTEAEREIEKFEKTIRENEESISLFK 598
Query: 414 NK 419
+
Sbjct: 599 EE 600
Score = 26.2 bits (55), Expect = 3.0
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 14/74 (18%)
Frame = +3
Query: 213 QAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKL--------------QKQTAKL 350
+ E E IE+ ++ I E+E+++ +++E+++L+ +IT+L QK+ L
Sbjct: 573 RTEAEREIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTL 632
Query: 351 KEKEMIEENLKTKE 392
+ EEN K KE
Sbjct: 633 E-----EENNKAKE 641
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 30.7 bits (66), Expect = 0.14
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 234 IEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQLIVLK 413
IE+ Q+E+ + E + +D+ S + KL+ L E +KT E+ + +K
Sbjct: 376 IEQLQRELASETVVKENLKSSLDQQSANVQKLESTNRAL------ESTIKTLEEDVYTMK 429
Query: 414 NK 419
NK
Sbjct: 430 NK 431
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 29.9 bits (64), Expect = 0.24
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 216 AENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEE-NLKTKE 392
+E + E Q+E ++ + E E+ E + K+ L + +LKEK +EE +L +
Sbjct: 897 SETKQQNENLQRESASLKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKDLLDTK 956
Query: 393 KQLIVLKNKHKTALME 440
+L L+ + T L E
Sbjct: 957 GELESLRENNATVLSE 972
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 29.1 bits (62), Expect = 0.42
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 324 KLQKQTAKLK-EKEMIEENLKTKEKQLIVLKN--KHKTALMELLGNVPEKDFAVTINKFE 494
K QKQ LK EKE +E +L+ KEK ++N K +L+ EK A+T K E
Sbjct: 118 KTQKQIEDLKKEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAIT--KEE 175
Query: 495 CE 500
CE
Sbjct: 176 CE 177
Score = 25.8 bits (54), Expect = 3.9
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +3
Query: 237 EECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKE--MIEENLKTKEKQLIVL 410
EEC++ E +K + EQE + +QK T+K++E + ++ +L+ + + L
Sbjct: 174 EECEKSWLEQQKLYKDMEQE------NASTIQKLTSKIRELQASQLDHDLQASQNESAGL 227
Query: 411 KNKHKTALMELLGNVPEKDFAVTINKFECEVRNEV 515
K+A E+ + E D A NK E++ E+
Sbjct: 228 DVNAKSA--EVNAILSELDDA---NKIIVELQAEI 257
>SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 29.1 bits (62), Expect = 0.42
Identities = 15/60 (25%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 246 QQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEE--NLKTKEKQLIVLKNK 419
+QEI + E E +EL K++K+Q++ L E+ + E+ +++K + L++ +++
Sbjct: 215 EQEIKDQSLRFESSLNEANELHGKLSKIQQEQEHLFEQRLREKVSEMESKLEALLIARDE 274
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.7 bits (61), Expect = 0.56
Identities = 19/75 (25%), Positives = 41/75 (54%)
Frame = +3
Query: 210 KQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTK 389
K+ E L E+ +++ E E+ + +Q+ E +K+ K Q++ + EK E+ L+ +
Sbjct: 640 KREEQRLKREQ-EKKQQELERQKREEKQKQKEREKKLKKQQQEADR--EKMAREQRLREE 696
Query: 390 EKQLIVLKNKHKTAL 434
E++ I+ + K + L
Sbjct: 697 EEKRILEERKRREKL 711
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 28.7 bits (61), Expect = 0.56
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +3
Query: 240 ECQQEINEDEKAVEQYEQE-MDELSQKI-TKLQKQTAKLKEKEMIEENLKTKEKQLIVLK 413
EC E + E V E++ D + + + T+L KQ L +K + EENL+ + +I
Sbjct: 453 ECLPEDSLGEAVVNFVEKDDRDAIKECVETQLNKQINLLVKKRVTEENLEQEISSIINDL 512
Query: 414 NKHKTALMELLGNVPEKDFAVTIN 485
K T + +PE+ +IN
Sbjct: 513 PKISTTKRKDYEELPEEVSETSIN 536
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 28.3 bits (60), Expect = 0.73
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 237 EECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEE 374
E+ Q E+E+ +++YE +ELS L K A + E++ EE
Sbjct: 587 EKIQYLETENEEVLQKYENLQEELSSTRKLLTKNEAAVAEQQSNEE 632
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 28.3 bits (60), Expect = 0.73
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 219 ENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKL 329
E E+ EE + E E+E+ V YE E +EL K+ L
Sbjct: 353 EEEIKEEEMEGEEEEEEEEVPNYESE-NELEDKVGDL 388
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 28.3 bits (60), Expect = 0.73
Identities = 13/66 (19%), Positives = 35/66 (53%)
Frame = +3
Query: 216 AENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEK 395
+E + + + Q ++ + ++ + E+D L + L+K +K+ +EE ++T ++
Sbjct: 739 SETKTELSDLQGDLQGLDIRKDEIQSELDTLYLRRANLEKLQLLVKDISNLEEEIRTIDR 798
Query: 396 QLIVLK 413
+ VL+
Sbjct: 799 ETEVLR 804
Score = 27.9 bits (59), Expect = 0.97
Identities = 20/107 (18%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Frame = +3
Query: 210 KQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTK 389
K E + + +++ + A+ E +DE+S+ + K + + ++ EEN K
Sbjct: 478 KSLRQEYESKNLLELLDKHQTALSSVENRLDEISEIVDSYHKYSGVRTKLQVFEENKTNK 537
Query: 390 E----KQLIVLKNKHKTALMELLGNVPEKDFAVTINKFECEVRNEVE 518
QL+ LK+ + L + + ++ ++K +VR +++
Sbjct: 538 SAILANQLMTLKSSFSEVMSYELKD--DDNYNEELDKLVEDVRKKLQ 582
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 27.9 bits (59), Expect = 0.97
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +3
Query: 234 IEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQLIVLK 413
IEE Q+ E + + + + K+ +QT K+ +E+ + NLK ++ L V K
Sbjct: 136 IEELYQKKTALEIDLSEKKDAYEYSCNKLNSYMRQTKKMTGRELDKYNLKIRQAALAVKK 195
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 27.9 bits (59), Expect = 0.97
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +3
Query: 222 NELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLK 353
N+L E+ Q + +KA+E+ E +EL++ + +K+ ++K
Sbjct: 503 NDLRAEQQQIMLEARQKAIERRRNEEEELARSRERARKKAEEIK 546
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +3
Query: 207 HKQAENELNIEECQQEINEDEKAVEQYEQEM------DELSQKITKLQKQTAKLKE 356
HK+ E E ++ N D+ +E+ E+EM D S+++T+ Q T++ +E
Sbjct: 682 HKKQRLEAGEEFDSEDDNSDDMDIEESEEEMDTNMVIDSGSRRVTRSQNATSQSQE 737
>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ysh1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 237 EECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEK 395
E Q +++ED+ E E + D++ ++ TK++ + E +EE K++EK
Sbjct: 714 EASQNDVSEDD--FENEESDDDKIFEQQTKIEDDVKNENKTEPVEEQ-KSEEK 763
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 219 ENELNIEECQQEINEDEKAVEQYEQEMDELSQKI-TKLQKQTAKLKEKEMIEENL 380
ENE+N E + + E E QYE+ + L +++ T K K + + EN+
Sbjct: 540 ENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTARMKLADKYPQGDNTSENI 594
Score = 26.2 bits (55), Expect = 3.0
Identities = 20/102 (19%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Frame = +3
Query: 225 ELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQLI 404
+L + + Q+E+ + +E+ +DEL+ KL KQ ++E+ ++++L ++L
Sbjct: 477 KLCLSDSQEELLQLNAKLEKANIVIDELNSAKLKLSKQ---VEEESSMKDDLTEMNQRLK 533
Query: 405 VLKNKHKTALMELLGNVPEKDFAVTINKFE---CEVRNEVET 521
++ + + + K+F ++E C +R +++T
Sbjct: 534 EQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKT 575
>SPAC11H11.05c |fta6|sma6|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 59
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 273 AVEQYEQEMDELSQKITKLQKQTAKLKE 356
AVE ++ ++EL + K+QKQT KE
Sbjct: 10 AVETFKSRLEELLMQSAKVQKQTMLRKE 37
>SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 401
Score = 27.1 bits (57), Expect = 1.7
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 234 IEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQLIVLK 413
+++ ++ K E + E+D ++++++ ++KEK ++ L + + +VL
Sbjct: 245 MDDVTEKFASKSKEYEDLQNELDATQKRLSRVSDLEHEVKEKTLLIGKL---QHEAVVL- 300
Query: 414 NKHKTALMELL--GNVPEK 464
N+H T + +L GN EK
Sbjct: 301 NEHLTKALCMLKDGNNAEK 319
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/68 (19%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 207 HKQAEN-ELNIEECQQEINEDEKAVEQYEQEMDE--LSQKITKLQKQTAKLKEKEMIEEN 377
H+ E+ + + +C++++ + + EQYE E+ +Q +++ ++ K E + E
Sbjct: 178 HEMQESLAVRLADCEEQLARETERQEQYEVEIQRHLTNQHQLEIELESTKASHTENLGEL 237
Query: 378 LKTKEKQL 401
+ +K +
Sbjct: 238 TRNWQKAM 245
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/80 (21%), Positives = 39/80 (48%)
Frame = +3
Query: 222 NELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQL 401
+++ +E+ ++NE + +++ E+ +++ KLQ + +K ++ K K L
Sbjct: 142 SDIKLEQLSAKLNELHQIYRLRKEKNIEIKEELKKLQ-DSLSIKLSMPADDLSKNGIKHL 200
Query: 402 IVLKNKHKTALMELLGNVPE 461
I+ K K + +L V E
Sbjct: 201 IIYKEKLRFSLESRKSRVDE 220
>SPBC1347.03 |meu14||sporulation protein Meu14|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 288 EQEMDELSQKITKLQKQTAKLKEKEMIEE 374
E+E D LS K+T LQ Q + + + ++ E
Sbjct: 145 EEERDPLSPKLTDLQNQLVRTEAENLVGE 173
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2
Query: 517 STSFRTSHSNLLIVTAKSFSGTLPSSS 437
S+SF +S S+ I ++ S SGTLPS S
Sbjct: 208 SSSFTSSTSSTPISSSYSSSGTLPSKS 234
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 219 ENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLK 353
++ELN + E + K Q +EM LS +T+L+K+ KL+
Sbjct: 307 QSELNEWKNTVERLDHSKFYTQSVEEMRRLSDTVTQLEKRVLKLQ 351
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 26.6 bits (56), Expect = 2.2
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Frame = +3
Query: 312 QKITKLQKQTAKLKEKEMIEENLKT-------KEKQLIVLKNK-HKTALMELL--GNVPE 461
+KITK +K+ K K+KE + K+ K+K+ I LK+K T+ +E + GN P
Sbjct: 193 EKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKKKKKIKLKDKPESTSSVEKVKEGNRPA 252
Query: 462 KDFAVTINKFECEVRNEV 515
T KF + R V
Sbjct: 253 SIHFHTRRKFLAQKRAAV 270
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 2.2
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +3
Query: 213 QAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIE--ENLKT 386
Q ENE + + E N D A ++ E EM +K + ++ A K K+ + ++ T
Sbjct: 123 QLENETDTKSLPVEANNDNSARKKNEYEM---KKKGAQSKQTNAPKKGKKQLRKWDDQIT 179
Query: 387 KEKQLIVLKNKHKTALMELLGNVPEKDFAVTINKFE 494
+E+Q + + ++ + + N NKF+
Sbjct: 180 EEEQAALNYSSQASSASQTVDNSQLSSIVGNNNKFQ 215
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 3.0
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +3
Query: 210 KQAENELNIEECQQEINE--DEKAVEQYEQEMDELSQ-KITKLQK-QTAKLKEKEMIEEN 377
KQ N L I C ++ + +EK EQY QE ++ Q KL+ AK KE+ EEN
Sbjct: 265 KQLRNIL-IRSCMLDLIQTTEEKLYEQYRQEQMKVRQYGEPKLRTIDNAKFKEE---EEN 320
Query: 378 LKTK 389
L+ +
Sbjct: 321 LRKR 324
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 237 EECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEK 359
E C+Q + EK ++ ELS+ K+Q++ KL+EK
Sbjct: 126 ELCEQIYRQAEKLSFGTSLKIIELSKSNEKIQEKAPKLREK 166
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 26.2 bits (55), Expect = 3.0
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Frame = +3
Query: 267 EKAVEQYEQEMDELSQKITKLQKQTAKLKE--------KEMIEENLKTKEKQLIVLKNK- 419
E ++ E +++ L++K+ K T K K+ + +NL KE + LKNK
Sbjct: 749 ESKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENIISDLKNKL 808
Query: 420 --HKTALMELLGNV-PEKDFAVTINK 488
T L EL + +K+ T+N+
Sbjct: 809 SEESTRLQELQSQLNQDKNQIETLNE 834
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 QEMDELSQKITKLQKQTA-KLKEKEMIEENLKTKEKQLIVLKNKH 422
QE+ L Q+ K K A +++ + ++E L KQL LK KH
Sbjct: 535 QEISILKQRNQKFLKNNATSIQQIQYLDEELGKTLKQLNDLKEKH 579
>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 707
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +3
Query: 210 KQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEEN 377
K NE + + E+E +E Y+++++ L +K + K + +++++E N
Sbjct: 97 KNLPNENTQDSTSESSEEEEDGLESYQKQLEGLKEKDPEFYK-FLEQNDQDLLEFN 151
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 9/59 (15%)
Frame = +3
Query: 249 QEINEDEKAVEQYEQEM-------DELSQKIT--KLQKQTAKLKEKEMIEENLKTKEKQ 398
+E+N DE+ EQ E+E+ DE+++K + KL+K+ + K + +++ K+++
Sbjct: 173 EELNSDEEDAEQAEEEILEKPVPKDEVAEKHSKDKLKKEEKEKKTAVDVSDSVNGKKRK 231
>SPBC1861.02 |abp2||ARS binding protein Abp2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 291 QEMDELSQKITKLQKQTAKLKEKEMIEENLKTK 389
+ +D +S ++ K A LKEK + ENLK K
Sbjct: 488 EPLDTVSSLKLEIAKLNAALKEKNLELENLKRK 520
>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 231
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 261 EDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQ 398
EDE + + ++ L Q QK+ + K+KE+ + NLK K+K+
Sbjct: 26 EDESVDDNFPKQFKRLLQ-----QKEYHESKKKEIKKGNLKNKKKK 66
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 237 EECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKE 362
+E + INE E+ ++ YE + EL+ I + + KLK+KE
Sbjct: 541 KEKDRLINELEQRIKSYEVNVSELNGTIDEYRN---KLKDKE 579
>SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein
Did4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 210 KQAENELNIEECQQEI---NEDEKAVEQYEQEMDELSQKI 320
+Q E E I E +QE+ N D+ E E+E DEL K+
Sbjct: 130 QQFERENEIMEQRQEMIDENMDDALEEDDEEEADELVNKV 169
>SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subunit
Rpa34 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 251
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +3
Query: 213 QAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEK 359
Q + +EE Q + E +K +++ ++E + +K K +++ + KEK
Sbjct: 202 QETGDATVEELQNKGKEKQKELKKGKREKKDEEEKPKKKKQKKSSKKEK 250
>SPAC29E6.04 |nnf1|SPAC30.08|kinetochore protein
Nnf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 205
Score = 25.4 bits (53), Expect = 5.2
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +3
Query: 237 EECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQLIVLKN 416
E +I +EKA E M L I KL+K + EK + +E T L ++N
Sbjct: 132 EGLSTQIAAEEKATEDCISRMQSL---IQKLEKTVYGMNEKNLAKEAHDTLNDLLPYIQN 188
Query: 417 KHKT 428
T
Sbjct: 189 PSST 192
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.4 bits (53), Expect = 5.2
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 234 IEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKE-MIEENLKTKEKQLIVL 410
IEE QEI + +E + + ++L + + Q + +L+ K + +TK +Q++
Sbjct: 1333 IEELNQEIGHLKSELETVKSKSEDLENERAQNQSKIEQLELKNTKLAAAWRTKYEQVV-- 1390
Query: 411 KNKHKTALMELLGNVPEKDFAVTINKFECEVRNE 512
NK ++ + +K + EC NE
Sbjct: 1391 -NKSLEKHNQIRQQLSQKTSELEAKVAECHQLNE 1423
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +3
Query: 225 ELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKL 350
E +EE ++ D+ + E+E DEL ++ +Q + +++
Sbjct: 284 EKELEELSKDQTADQAISRRLERERDELDLRLLDIQNKLSEM 325
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +3
Query: 210 KQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLK 383
KQ +NE++ + + D K+ EQ + +TK K+ A + K+ + K
Sbjct: 9 KQTKNEIHQVTSRVQEKLDSKSTNAVEQNNNSSQASVTKDNKKKAAKRAKKKAAKKKK 66
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.0 bits (52), Expect = 6.8
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 234 IEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQLIVLK 413
+E Q ++ KA+ + M + + + QKQ L+ + + K KE K
Sbjct: 871 VENGSQLLDSKSKAIHSNSRSMYDHCLALAESQKQGVNLEVQTLDRLLQKVKEHSEDNTK 930
Query: 414 NKHKTALMELL 446
KH+ L++LL
Sbjct: 931 EKHQ-QLLDLL 940
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 213 QAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQ 338
Q+E+ + ++ D EQ E+E +L +I L+KQ
Sbjct: 502 QSEDNFGARDEDWKVYHDVLTAEQLEEERKKLLDQIYSLEKQ 543
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 207 HKQAENELNIEECQQEINEDEKAVEQYEQEMDELSQ-KITKLQKQTAKLKEKEMIE 371
+++ NE + E +E+E+AVE E+ DE+++ + L+ ++ +EK+ IE
Sbjct: 221 NEEGVNESGVPVLFNEADEEEEAVEAMEE--DEVAEDEDVVLETSISQEEEKKNIE 274
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 25.0 bits (52), Expect = 6.8
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = +3
Query: 300 DELSQKIT-KLQKQTAKLKEKEMIEE-------NLKTKEKQLIVLKNKHKTALMELLGNV 455
D L+ +T K +K+ + K+KE+ ++ N+++ Q+ +K T+L LGN
Sbjct: 881 DSLTTIVTDKDEKEKFETKKKELTQDSSFCKFQNIRSNFSQIAYGVSKFFTSLTRALGNT 940
Query: 456 PEKDF 470
+DF
Sbjct: 941 SVQDF 945
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 246 QQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEEN 377
+ E+ +K + +MD+L++ + KLQ+ L+ +M+ EN
Sbjct: 158 ESEVGAGKKKAKAKPVDMDKLAEGLQKLQEDDL-LQVVQMVNEN 200
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.0 bits (52), Expect = 6.8
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Frame = +3
Query: 219 ENELNIEECQQEINEDEKAVEQYEQE------MDELSQKITKLQKQTAKLKEK--EMIEE 374
ENE +++ Q+E+ ++ +VE+ + M EL + + K+ AK+K K I +
Sbjct: 405 ENESALKK-QEELALNKLSVEEVAERTRQLRFMRELMFREERKAKRVAKIKSKTYRKIRK 463
Query: 375 NLKTKEKQLI 404
N K KE LI
Sbjct: 464 NRKEKEMALI 473
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 435 SGPSCVCF*EQLTVFL*F*DSLRSFPFLSI*QFAFEAWLSFD 310
S P+C C+ E + V + S RS + S + + WL FD
Sbjct: 363 SDPNCSCWYELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFD 404
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 267 EKAVEQYEQEMDELSQKITKLQKQTA-KLKEKEMIEENLKTKEKQLIVL 410
++ V +Y + + EL QK++ LQK+ A + K+ + +E K +++ +L
Sbjct: 401 DRHVSEYVRTIYELRQKVSILQKRIAEESKQLALNKEVRKISSREIKML 449
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.0 bits (52), Expect = 6.8
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 276 VEQYEQEMDELSQKITKLQKQTAKL-KEKEMIEENLKTKEKQLIVLKNKHKTALMELLGN 452
VE + + L ++T ++ L EK+ IEE+L K+ ++ L + T L + L +
Sbjct: 897 VEVVHERLSSLENQVTIADEKYEFLYAEKQSIEEDLANKQTEISYLSDLSST-LEKKLSS 955
Query: 453 VPEKDFAVTINKFE 494
+ +KD +K++
Sbjct: 956 I-KKDEQTISSKYK 968
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 288 EQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEK 395
E+EM+ + ++ L Q AK +E+E EE + ++
Sbjct: 948 EEEMERIEEEERMLAAQRAKEEERERREEEERENDE 983
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 276 VEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQLIVLKNKHKTAL 434
V++YE+E +++ ++Q+QT KE++ E L K + V K+K L
Sbjct: 260 VKEYEEEYVPEMERMKEIQRQT---KERQK-EAQLSKLMKDMHVSKDKEDVGL 308
>SPBC18H10.15 |ppk23||serine/threonine protein kinase
Ppk23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 398
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 3 EEEKKAQGFVDECRVALSGHT 65
EEEK + +D CR+ L G+T
Sbjct: 42 EEEKAEERNIDACRLYLMGNT 62
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 210 KQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEM 365
KQA EL + + ++ + E Q+E+ + L ++ LQ++ +L + M
Sbjct: 86 KQATPELQVSDSKEMEEQLELQKSQFEKRISILEKEKEDLQRKMEELTVESM 137
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 24.6 bits (51), Expect = 9.0
Identities = 21/85 (24%), Positives = 37/85 (43%)
Frame = +3
Query: 213 QAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKE 392
+AE E E +Q + E E+YE+ +E + +L + L ++ EE +T
Sbjct: 166 EAETERANSETEQYEKQKEALEEEYEELRNECLKHDPQLDAEIRTL--QDTFEEVERTLT 223
Query: 393 KQLIVLKNKHKTALMELLGNVPEKD 467
KQ+ K K + + EK+
Sbjct: 224 KQVSDAKIADKPLKDSMFNSNSEKE 248
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +3
Query: 219 ENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLK 383
E L++ E N E V++YE +D + + L +T ++ + N+K
Sbjct: 449 ETSLSLYSSFSEYNSLEVGVDRYELGLDPQNITVPPLSHKTYQISPRSSANINVK 503
>SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|chr
1|||Manual
Length = 402
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/98 (18%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +3
Query: 210 KQAENELN-IEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKT 386
K EN+L+ ++ +++ + E +L++ ++ K +K + + E+NL
Sbjct: 232 KYFENQLHLVKASSSDVSNSSNSFP--ENRYPKLTKVEKQMTKSVSKTSQTDKDEDNLDF 289
Query: 387 KEKQLIVLKNKHKTALMELLGNVPEKDFAVTINKFECE 500
+ L +KN H + ++ F+ CE
Sbjct: 290 TKNLLTRIKNLHPLTNKSTIHSLLSYVFSRQTQNIACE 327
>SPBC13A2.02 |||nucleoporin Nup82|Schizosaccharomyces pombe|chr
2|||Manual
Length = 803
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 288 EQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEK 395
E+ +D++ Q++ L+ KEK+ I+E KEK
Sbjct: 695 EKRIDQVLQRVMDLRVPDLSDKEKQFIKEIGNYKEK 730
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,389,152
Number of Sequences: 5004
Number of extensions: 19094
Number of successful extensions: 211
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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