Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305A12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    32   0.010
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    31   0.018
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    31   0.018
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    28   0.22 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.5  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   1.5  
AF185643-1|AAF15578.1|  117|Anopheles gambiae Toll-related prote...    25   1.5  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   1.5  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   2.0  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   2.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   2.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.2  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   8.2  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   8.2  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   8.2  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 32.3 bits (70), Expect = 0.010
 Identities = 11/51 (21%), Positives = 37/51 (72%)
 Frame = +3

Query: 231 NIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLK 383
           ++E  ++ INE ++ +E + +E+D++  KI+++++   ++++++M  +++K
Sbjct: 731 DLETSKKNINEYDRQLEDFTRELDQIGPKISEIER---RMQQRDMKIQDIK 778



 Score = 27.5 bits (58), Expect = 0.29
 Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
 Frame = +3

Query: 210 KQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEK-----EMIEE 374
           K+  +E+ ++E ++E+ +  + + + EQE+ E+  +++K      K KEK     + ++ 
Sbjct: 266 KEEADEV-LKEKKKEVGKMTREMAKKEQEIREVEAEMSKRHPMFIKAKEKVAHTQKKLDG 324

Query: 375 NLKTKEKQLIVLKNKHKTALMELLGNVPEKDFAVTINKFECEVRNE 512
            LKT E Q       H+  + +L+  + E +  V    FE EV  E
Sbjct: 325 ALKTLE-QARRADEAHQADIKKLVDELQEVE--VKRAAFENEVAGE 367



 Score = 23.8 bits (49), Expect = 3.6
 Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
 Frame = +3

Query: 219 ENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEM-IEE--NLKTK 389
           E + + +    EIN+  +  E Y++   E ++ + + +K    +K   + +EE   +K +
Sbjct: 409 EQKSDQDRLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAE 468

Query: 390 EKQLIVLKNKHKTALMELLGNVPEKDFAVTINKFE 494
             Q +    +    L   L NV E+     I+K E
Sbjct: 469 LSQDVGTSKERIHELQSELDNVREQLGDAKIDKHE 503


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 31.5 bits (68), Expect = 0.018
 Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = +3

Query: 213  QAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEM-IEENLKTK 389
            Q E E N  + ++E+ E + A+E+  +    + ++I  LQK+ A+ K K +  E+ L+T 
Sbjct: 960  QLEEEAN--KLREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQTI 1017

Query: 390  EKQL 401
            E +L
Sbjct: 1018 ETKL 1021



 Score = 22.6 bits (46), Expect = 8.2
 Identities = 16/62 (25%), Positives = 24/62 (38%)
 Frame = +3

Query: 213  QAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKE 392
            QAE         +++   E  V + +Q  D  S K   +QK   +  E+     N K K 
Sbjct: 838  QAERVARTHSDPEKVRALEAKVAECKQAFDSSSTKADAMQKNVDRYTEQINEITNSKVKV 897

Query: 393  KQ 398
             Q
Sbjct: 898  LQ 899


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 31.5 bits (68), Expect = 0.018
 Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = +3

Query: 210 KQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEM-IEENLKT 386
           K AE +L   + + E  E  K  +++EQ+ + L  +I +LQK     KE+ + +EE +  
Sbjct: 790 KSAEEDLKRSKKKSE--ESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAA 847

Query: 387 KEKQLI 404
            +++L+
Sbjct: 848 LQQRLV 853


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 27.9 bits (59), Expect = 0.22
 Identities = 21/71 (29%), Positives = 35/71 (49%)
 Frame = +3

Query: 219 ENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQ 398
           E+E  +E+  + +   E  ++  E+E +ELS+   K  K    L E  + E  LK   KQ
Sbjct: 181 ESEGKLEKISEYLRTIEDRLKTLEEEKEELSE-YQKWDKARRTL-EYVIYETELKETRKQ 238

Query: 399 LIVLKNKHKTA 431
           L  L  + K++
Sbjct: 239 LEELDGQRKSS 249



 Score = 22.6 bits (46), Expect = 8.2
 Identities = 20/68 (29%), Positives = 33/68 (48%)
 Frame = +3

Query: 237 EECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQLIVLKN 416
           EEC +E+N         EQ+  EL  K  +  + ++K +  + I+  LK+  KQ I  K 
Sbjct: 359 EECSRELN-------LKEQKRKELYAKQGRGSQFSSKEERDKWIQGELKSLNKQ-IKDKI 410

Query: 417 KHKTALME 440
            H+  L +
Sbjct: 411 SHQNKLQD 418


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +3

Query: 240 ECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQ 398
           E ++E+ E  +  EQ E+E  E  Q+  + +++  + +EKE  E   + KE++
Sbjct: 469 EKERELREQRER-EQREKEQREKEQR--EKEERERQQREKEQREREQREKERE 518


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +3

Query: 300  DELSQKITKLQKQTAKLKEKEMIEE--NLKTKEKQLIVLKNKHKTALMELLGNVPEKD 467
            D + Q +   ++    L E  +  E    + K     VL+++ +  ++ LLG VP+KD
Sbjct: 1130 DNILQAVESSRRTIMVLSENFIKSEWCRFEFKSAHHQVLRDRRRRLIVILLGEVPQKD 1187


>AF185643-1|AAF15578.1|  117|Anopheles gambiae Toll-related protein
           protein.
          Length = 117

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +3

Query: 300 DELSQKITKLQKQTAKLKEKEMIEE--NLKTKEKQLIVLKNKHKTALMELLGNVPEKD 467
           D + Q +   ++    L E  +  E    + K     VL+++ +  ++ LLG VP+KD
Sbjct: 44  DNILQAVESSRRTIMVLSENFIKSEWCRFEFKSAHHQVLRDRRRRLIVILLGEVPQKD 101


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 10/64 (15%), Positives = 37/64 (57%)
 Frame = +3

Query: 207 HKQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKT 386
           H+Q + +   ++ QQ+  + ++  +Q +Q+  +  Q+  + Q+Q  + ++++  ++  + 
Sbjct: 311 HQQQQQQQQ-QQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQW 369

Query: 387 KEKQ 398
           +++Q
Sbjct: 370 QQQQ 373



 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/63 (14%), Positives = 35/63 (55%)
 Frame = +3

Query: 210 KQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTK 389
           +Q +     ++ QQ+  + ++  +Q +Q+  +  Q+  + Q+Q  + ++++  ++  + +
Sbjct: 306 RQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQ 365

Query: 390 EKQ 398
           ++Q
Sbjct: 366 QQQ 368



 Score = 23.8 bits (49), Expect = 3.6
 Identities = 7/54 (12%), Positives = 33/54 (61%)
 Frame = +3

Query: 237 EECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQ 398
           ++ QQ+ ++ ++  +Q +++  +  Q+  + Q+Q  + ++++  ++  + +++Q
Sbjct: 304 QQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQ 357


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
            protein.
          Length = 1087

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 294  EMDELSQKITKLQKQTAKLKEKEMIE 371
            EM E +QK+ +++KQ  K+ E+ +I+
Sbjct: 948  EMQEFAQKVQRIEKQ-QKIDEEALID 972


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 11/64 (17%), Positives = 34/64 (53%)
 Frame = +3

Query: 207 HKQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKT 386
           H+Q E +   ++ QQ+  + ++  +Q   +  E  Q+  + Q Q  + ++++ +++  + 
Sbjct: 229 HQQREQQQ--QQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQQNQQ 286

Query: 387 KEKQ 398
            ++Q
Sbjct: 287 HQRQ 290


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 15/76 (19%), Positives = 31/76 (40%)
 Frame = +3

Query: 210 KQAENELNIEECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTAKLKEKEMIEENLKTK 389
           KQA  E  +    + +   +K   Q EQ++ E ++      +Q  +  E E  +   +  
Sbjct: 397 KQAAIERGMRNASERVTRIQKDARQIEQDLQERNRDGLSQVEQRKQAVETEKAQLKERND 456

Query: 390 EKQLIVLKNKHKTALM 437
           E   ++   + +  LM
Sbjct: 457 ELASMIASAQREVDLM 472


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = +3

Query: 303 ELSQKITKLQKQT--AKLKEKEMIEENLK 383
           E S++ TK + +    KL+EK+ IEE+L+
Sbjct: 382 EFSKERTKAKNRGDFQKLREKQQIEEDLR 410


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 288  EQEMDELSQKITKLQKQTAKLKEKEMIEENLKTKEKQLIVLK 413
            E+E  E S+K  K      + K ++ ++E L  K+K  I+ K
Sbjct: 972  EEEEGEGSRKRKKKGASGGQKKRQKAMDEGLSQKQKGRILSK 1013


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +3

Query: 237 EECQQEINEDEKAVEQYEQEMDELSQKITKLQKQTA 344
           E C  EI    + + Q+ Q MD+ + +  + + + A
Sbjct: 483 ERCVDEIEAASQKLHQWRQAMDKFADRPAREKTEPA 518


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +3

Query: 240 ECQQEINED-EKAV---EQYEQEMDELSQKITKLQKQTAKLK 353
           E ++E   D EKA+   E+Y ++M  + ++ TKL  Q   +K
Sbjct: 86  ETKEEARRDKEKAIRHREEYRRDMALIREENTKLLAQLMAMK 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,070
Number of Sequences: 2352
Number of extensions: 4170
Number of successful extensions: 44
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)