Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305A11f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 252 1e-67
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 244 3e-65
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 200 7e-52
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 169 2e-42
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 98 4e-21
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 5e-18
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 85 3e-17
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 83 2e-16
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 81 5e-16
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 77 7e-15
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 5e-11
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 52 2e-07
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 39 0.002
SB_24028| Best HMM Match : DNA_photolyase (HMM E-Value=1.3e-39) 35 0.047
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 32 0.33
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 31 0.44
SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_19689| Best HMM Match : VWA (HMM E-Value=0.0035) 30 1.0
SB_3760| Best HMM Match : SVA (HMM E-Value=0.19) 30 1.0
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 30 1.3
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_26973| Best HMM Match : DUF471 (HMM E-Value=1.1) 28 4.1
SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085) 28 4.1
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 5.4
SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5) 28 5.4
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 27 7.1
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 27 7.1
SB_43146| Best HMM Match : Ank (HMM E-Value=0) 27 7.1
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_43957| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.6e-13) 27 9.4
SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56) 27 9.4
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 27 9.4
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 27 9.4
SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_12627| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_8905| Best HMM Match : FYVE (HMM E-Value=0.13) 27 9.4
SB_1649| Best HMM Match : ANF_receptor (HMM E-Value=1.2e-05) 27 9.4
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 252 bits (618), Expect = 1e-67
Identities = 112/151 (74%), Positives = 127/151 (84%)
Frame = +1
Query: 67 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQ 246
PRVFFD+T+ + G+IV+ELRSDV P T ENFR LCT EKGFGYKGS FHR+IP FM Q
Sbjct: 137 PRVFFDITIGERSAGRIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQFMCQ 196
Query: 247 GGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLD 426
GGDFT HNGTGGKSIYG KFEDENF LKHTG GVLSMAN+G +TNGSQFF+TT KT WLD
Sbjct: 197 GGDFTKHNGTGGKSIYGAKFEDENFVLKHTGAGVLSMANSGPNTNGSQFFLTTEKTDWLD 256
Query: 427 GRHVVFGNVVEGMEVVKQIETFGSQSGKPLK 519
G+HVVFGNV+EG +VV+++E GSQSGK K
Sbjct: 257 GKHVVFGNVIEGFDVVRKMEAVGSQSGKASK 287
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 244 bits (597), Expect = 3e-65
Identities = 110/148 (74%), Positives = 123/148 (83%)
Frame = +1
Query: 76 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 255
+FD+ + AP G+IV+ELR DV PKT ENFRALCTGEKGFGYKGS FHRVIP FM QGGD
Sbjct: 6 YFDIEIGGAPAGRIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQGGD 65
Query: 256 FTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRH 435
FT +GTGGKSIYG KF DENF LKHTGPG+LSMANAG TNGSQFF+ T KTSWLDG+H
Sbjct: 66 FTRGDGTGGKSIYGAKFADENFNLKHTGPGILSMANAGPGTNGSQFFLCTAKTSWLDGKH 125
Query: 436 VVFGNVVEGMEVVKQIETFGSQSGKPLK 519
VVFG+V +GM+VVK+IE GS SGK K
Sbjct: 126 VVFGSVKDGMDVVKKIEKVGSDSGKTSK 153
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 200 bits (487), Expect = 7e-52
Identities = 93/150 (62%), Positives = 112/150 (74%), Gaps = 1/150 (0%)
Frame = +1
Query: 70 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 249
+V+ DV++ P G++++ L D PKT NF AL E+GFGYK SIFHRVI NFM+QG
Sbjct: 27 KVWMDVSIGGQPAGRVILGLFGDTAPKTVANFVALADKEQGFGYKDSIFHRVIKNFMIQG 86
Query: 250 GDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDG 429
GDFTN +GTGG SIYG F+DENF LKH GPG L MANAG +TNGSQF+ITT+KTSWLDG
Sbjct: 87 GDFTNKDGTGGYSIYGKYFDDENFNLKHYGPGWLCMANAGKNTNGSQFYITTIKTSWLDG 146
Query: 430 RHVVFGNVVEGMEVVKQIE-TFGSQSGKPL 516
H FG V+EGM+VV++IE T KPL
Sbjct: 147 SHTCFGKVLEGMDVVRRIENTRVDTHDKPL 176
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 169 bits (410), Expect = 2e-42
Identities = 90/152 (59%), Positives = 105/152 (69%), Gaps = 18/152 (11%)
Frame = +1
Query: 70 RVFFDVTVDDAPLGKI------VIELRSDVTPKTCE-----NFRAL-----CT--GEKGF 195
+VFFD+T+ G+I +I+ + + E NFR CT +KGF
Sbjct: 28 KVFFDITIGGEKAGRIEIGLFVIIKTYYLLATRLVESLIGTNFRYFDTYYCCTIESQKGF 87
Query: 196 GYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGAD 375
GYK SIFHRVI +FM+QGGDFT +GTGGKSIYG KF DENF L+H G G LSMANAG D
Sbjct: 88 GYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAGWLSMANAGKD 147
Query: 376 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 471
TNGSQFFITTVKT WLDGRHVVFG V++GMEV
Sbjct: 148 TNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 97.9 bits (233), Expect = 4e-21
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = +1
Query: 268 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 444
+GTGG+SI+G +FEDE + L+H P +SMANAG +TNGSQFFIT V T WLD +H VF
Sbjct: 2 DGTGGESIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVF 61
Query: 445 GNVVEGMEVVKQI 483
G VV+GM+V +QI
Sbjct: 62 GRVVKGMDVAQQI 74
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 87.8 bits (208), Expect = 5e-18
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = +1
Query: 355 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKPLK 519
MANAG DTNGSQFFITTVKTSWLDG+HVVFG V+EGM+VV+++E + P+K
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLENVNVKGSTPVK 55
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +1
Query: 271 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 450
G GG+S+YG FEDE+F++ H GV+ MAN G TNGSQF+IT W+D ++V FG
Sbjct: 46 GIGGESVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQ 105
Query: 451 VVEGMEVVKQIE 486
V+EG+ V+ +E
Sbjct: 106 VIEGLNVLDVLE 117
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = +1
Query: 328 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 507
+H PG+LSMAN+G +TNGSQFFITTV T LDGRHVVFG V++GM+VV+++E
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEATPVDDS 247
Query: 508 KP 513
P
Sbjct: 248 SP 249
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 81.0 bits (191), Expect = 5e-16
Identities = 42/74 (56%), Positives = 51/74 (68%)
Frame = +1
Query: 268 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 447
NGTGG+SIYG F DE F KH P +LSMAN G +TNGSQFFI HVVFG
Sbjct: 25 NGTGGESIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFG 74
Query: 448 NVVEGMEVVKQIET 489
+V++G E+V+QIE+
Sbjct: 75 HVIQGEELVRQIES 88
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 77.4 bits (182), Expect = 7e-15
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +1
Query: 346 VLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 483
+LSMANAG TNGSQFF+ T KTSWLDG+HVVFG+V +GM+VVK++
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 64.5 bits (150), Expect = 5e-11
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Frame = +1
Query: 106 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 285
LG+I IEL +D P + NF A + G+ Y G+ FHRVIP FM+QGG F + +
Sbjct: 32 LGEIEIELDADKAPISTANFLAYV--DSGY-YAGTQFHRVIPGFMVQGGGF---DADMQQ 85
Query: 286 SIYGNKFEDENFTLKHTGPGVLSMANAGA-DTNGSQFFITTVKTSWLDG-----RHVVFG 447
++E H G L+MA D+ SQFFI ++LD + VFG
Sbjct: 86 KDTQAPIKNEADNGLHNVRGTLAMARTQVRDSATSQFFINHKDNAFLDHGSRDFGYAVFG 145
Query: 448 NVVEGMEVVKQI 483
VV+GM+VV +I
Sbjct: 146 KVVKGMDVVDKI 157
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 8/46 (17%)
Frame = +1
Query: 109 GKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSIFHR 222
G+++ EL +D PKT ENFRALCTGEKG G YKG FHR
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 331 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 447
H G +SMAN G ++NGSQFFI K LD ++ +FG
Sbjct: 301 HNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFG 339
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = +1
Query: 106 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 285
+G I IEL TPK C NF LC +G+ Y +IFHR++ +GG+ N G G
Sbjct: 12 VGDIDIELWGKETPKACRNFIQLCL--EGY-YDNTIFHRIV-----KGGE--NIYGQSGF 61
Query: 286 SIYGN 300
+ GN
Sbjct: 62 KVTGN 66
>SB_24028| Best HMM Match : DNA_photolyase (HMM E-Value=1.3e-39)
Length = 432
Score = 34.7 bits (76), Expect = 0.047
Identities = 26/104 (25%), Positives = 46/104 (44%)
Frame = +2
Query: 5 ALSLWWFCKLLTLLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTSVPCALA 184
ALS C+L L C S +L T E LS V+ + + T+V C L
Sbjct: 326 ALSTTVSCQLKALSTTVSC-----QSKALSTTVSCELKALSTTVSCELKALSTTVSCQLK 380
Query: 185 RKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTR 316
++ +S+ +SC + S T++ ++ ST +S +++
Sbjct: 381 ALSTTVSCELKALSTTVSCQSKALSTTVSCQSKALSTTVSCQSK 424
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +2
Query: 80 STSLLTMPHWEKLLLS*EVTSLPRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTS 259
S +L T + LS V+ + + T+V C L ++ +S+ +SC + S
Sbjct: 324 SKALSTTVSCQLKALSTTVSCQSKALSTTVSCELKALSTTVSCELKALSTTVSCQLKALS 383
Query: 260 PTITALGESPSTAISLKTR 316
T++ ++ ST +S +++
Sbjct: 384 TTVSCELKALSTTVSCQSK 402
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 31.9 bits (69), Expect = 0.33
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = +1
Query: 433 HVVFGNVVEGMEVVKQIET 489
HVVFG+V++G E+V+QIE+
Sbjct: 3 HVVFGHVIQGEELVRQIES 21
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = -1
Query: 473 TTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 336
TT PST P T PS+ E +T WEP P PGP
Sbjct: 34 TTGEPSTWEPMTGA-PSTWEPMTGAPSTWEPWTDGPGPYPTDGPGP 78
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 446 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 336
P TT PS+ E +T WEP+ AP+ T GP
Sbjct: 32 PFTTGEPSTWEPMTGAPSTWEPMTGAPSTWEPWTDGP 68
>SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -1
Query: 476 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 336
L+ + + FP TT P + + T + EPL+ P +R P P
Sbjct: 13 LSATQLTAAFPTTTTTPVTTQTTTTDVSRTEPLIELPTAQEKRKPCP 59
>SB_19689| Best HMM Match : VWA (HMM E-Value=0.0035)
Length = 885
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 100 APLGKIVIELRSDVTPKTCENFRALCTG 183
AP I+I L S V+PKT E+ R LC G
Sbjct: 569 APKIDIIIALDSGVSPKTFEDERQLCAG 596
>SB_3760| Best HMM Match : SVA (HMM E-Value=0.19)
Length = 259
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = -1
Query: 449 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 336
FP+ + LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPSLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 141 DVTSQL-NNNFSQWGIVNSDVEEYSW*RHFAGISNVSNLQNHHNDNA 4
DV S L S WGI + D+E+ W + I+ L++ H D+A
Sbjct: 90 DVCSTLFQEELSYWGINDRDMEQCCWAHYKRQINTEETLKSFHLDSA 136
>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1110
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = -1
Query: 449 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 336
FP+ LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPPLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -1
Query: 494 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 315
P+ TTS PST+ P+T ++ T N AP+ + RT + LR
Sbjct: 87 PRTGSTTTTSAPSTSTPRTGSTTTTSAPSTSTTSN--STTRAPSTSTPRTGSTITLRTST 144
Query: 314 SS 309
+S
Sbjct: 145 TS 146
>SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2014
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 179 VHRARKFSHVLGV--TSLLSSITIFPSGASSTVTSKNTRGRDILPV 48
+ + KF+H+ G+ TS T+F +T T TR RD++ +
Sbjct: 168 IQQLHKFTHIHGMLSTSSRGRYTLFRGQYDTTATQIYTRSRDVIDI 213
>SB_26973| Best HMM Match : DUF471 (HMM E-Value=1.1)
Length = 674
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 185 RKASVTRAPFSIVSSPISCCKEGTSPTITALGESP 289
+K R S V SC +EG SPT T+ G++P
Sbjct: 276 KKPFSNREAHSCVELCRSCVREGCSPTPTSRGDAP 310
>SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085)
Length = 512
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -3
Query: 504 RLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARS 337
R A +GL D F+ K+ MS I+PGG D +EE T S G + E A+S
Sbjct: 444 RRAGEGLPHSDFKSGFSY--KEYMSGIRPGGPDMEEEEKATPQ-SNGDASDEKAQS 496
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = -1
Query: 506 PDWLPKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 336
P P + TT+ P TT P+TT P + T + P + P +T P
Sbjct: 1767 PPHSPPTTTTTTTTTPETTAPRTT-TPETTTPETTTPRTTTPETTKPRTTTPKTTTP 1822
>SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5)
Length = 128
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 170 PCALARKASVTRAPFSIVSSPISCCKE-GTSPTITA-LGESPST 295
PCALA SV+ P S VSS + G S TI+A SP T
Sbjct: 48 PCALATAPSVSEVPASTVSSSSPLRRSPGPSGTISASTSGSPRT 91
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 160 NFRALCTGEKGFGYKGSIF 216
NF + TG+KGFG++G F
Sbjct: 67 NFSSYSTGQKGFGFEGMDF 85
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 160 NFRALCTGEKGFGYKGSIF 216
NF + TG+KGFG++G F
Sbjct: 132 NFSSYSTGQKGFGFEGMDF 150
>SB_43146| Best HMM Match : Ank (HMM E-Value=0)
Length = 282
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 224 TRWKMEPL*PKPFSPVHRARKFSHVLGVTSLL 129
TR+ +EP K F+P+H A ++ HV V LL
Sbjct: 3 TRYPIEPA--KGFTPLHEAARYGHVHIVKLLL 32
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 497 LPKVSICL-TTSMPSTTFPKTTCLPSSQEVLTV-VMKNWEPLVSAPALAMERTPGP 336
+P+ ++ L TT+ P TT P T + S + +V M + S +A E T P
Sbjct: 1626 VPETTLALETTTAPETTLPPETTMASESTLASVTTMAPESTVASVTTMAPESTLAP 1681
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +1
Query: 250 GDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLD 426
G T GTGG S N + T PGV AN G S + ++ TSW +
Sbjct: 313 GAGTGGPGTGGPSGSSNPPTTGTPASASPTAPGVKGGANGGDCFRDSCYIFSSEGTSWTE 372
Query: 427 GR 432
R
Sbjct: 373 NR 374
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +2
Query: 215 SIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTLDLASSPWLMPVLILM 382
SIVS+ IS C T P+ T S+ + K I L D ++ P LIL+
Sbjct: 1087 SIVSNRISFCFNFTGPSFTVDTACSSSLTAFKLAIDNLQNGDCEAAIVCAPNLILI 1142
>SB_43957| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.6e-13)
Length = 560
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/52 (23%), Positives = 20/52 (38%)
Frame = -3
Query: 222 TMENGALVTEAFLASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDVEEYSW 67
T + L F S RLG + ++L F W +++ E +W
Sbjct: 95 TKDKAVLKALHFYDSCMDKAEIERLGGEPLTKLIKEFGSWAVIDKSWNETNW 146
>SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56)
Length = 1566
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 134 VTSLPRRVKTSVPCALARKASVTRAPFSIVSSPIS 238
VT LP VK + + ASVT P S+ P+S
Sbjct: 1224 VTQLPVSVKHLLTSVMHLHASVTHLPASVTQLPVS 1258
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 494 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 336
P TT+ P TT P+TT P + T + P+ + P T P
Sbjct: 155 PSPPTTTTTTTPETTAPRTT-TPETTTPETTTPRTTTPVTTTPRTTTPETTTP 206
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = -1
Query: 473 TTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 306
T TF LP ++ + + + P E+TPG C +VK+ S
Sbjct: 2328 TVGASDNTFVPAFALPEQNKMTATIRR----IAKTPGKHSEKTPGKACKQVKYIMS 2379
>SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 820
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -1
Query: 188 FSPVHRARKFSHVLGVTSLLSSITIFPSGASSTVTSKNTRGRDILPVLAM*AIYKTTTMT 9
FSPV+ A F+ L V LL P+GA T G+ + V M + T+
Sbjct: 16 FSPVNLAPTFNGRLQVAILLKGSRHAPTGAVQVPTQPENGGKVSIHVSVMTYAWSLETVA 75
Query: 8 M 6
M
Sbjct: 76 M 76
>SB_12627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 444
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 200 TRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTL 337
+ A S+ S SC E S + G IS+K+++SPL+ +
Sbjct: 360 SEASVSLTESVSSCSYESGSHLSASPGREEMGEISVKSKVSPLANV 405
>SB_8905| Best HMM Match : FYVE (HMM E-Value=0.13)
Length = 687
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 518 FRGXPDWLPKVSICLTTSMPSTTF-PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTP 342
F G P+WL + ++C+ + P T +P Q T + +P P + +
Sbjct: 62 FSGQPEWLYQAAVCVKCHQGLNSLPPSTVAIPVHQSKATFKVIECDP-QRKPIKEVTTSN 120
Query: 341 GPVCLRVKFSSS 306
V +FSSS
Sbjct: 121 SCVSTSSEFSSS 132
>SB_1649| Best HMM Match : ANF_receptor (HMM E-Value=1.2e-05)
Length = 481
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -1
Query: 188 FSPVHRARKFSHVLGVTSLLSSITIFPSGASSTVTSKNTRGRDILPVL 45
+SPVH K + + V + I + + +S+ RG ++L V+
Sbjct: 321 YSPVHNVEKSKNAITVLDTMKKIKVVGTTGQIHFSSEGERGGEMLDVM 368
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,546,351
Number of Sequences: 59808
Number of extensions: 435737
Number of successful extensions: 1503
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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