Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305A09f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.8  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   8.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.7  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -1

Query: 449 ITMNLMGSENSSTLFNR*PKCASTDLWASFFFFFLYQSVRNVLFMISHKQDFAVW 285
           +TM  +     STLF    K  S DL  +F+ F +   V ++LF++    +   W
Sbjct: 85  VTMMTLKRHKWSTLFEILLKLESKDLSRTFYGFVI---VAHLLFLVIFVLNIWCW 136


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 111 CGYHCRCRHQ 82
           CG +C C HQ
Sbjct: 562 CGQNCMCTHQ 571


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 96  CSGNRNQLSILPSHQQRISCIRCCPCRLCR 185
           C    +Q S + +H +  S  R   CRLC+
Sbjct: 55  CDRRFSQSSSVTTHMRTHSGERPYRCRLCK 84


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 96  CSGNRNQLSILPSHQQRISCIRCCPCRLCR 185
           C    +Q S + +H +  S  R   CRLC+
Sbjct: 311 CDRRFSQSSSVTTHMRTHSGERPYRCRLCK 340


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 409 FLIDNQNALLQTFGRVFFFFFYI 341
           F   N+  LLQ  G V  FF  I
Sbjct: 318 FFSINKTTLLQIIGNVTTFFIII 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,155
Number of Sequences: 336
Number of extensions: 1974
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)