Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305A08f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035026-1|AAH35026.1| 645|Homo sapiens family with sequence si... 33 0.61
AL645585-1|CAI41598.1| 645|Homo sapiens family with sequence si... 33 0.61
BX842568-3|CAI40150.1| 1035|Homo sapiens family with sequence si... 31 1.9
AK125992-1|BAC86381.1| 910|Homo sapiens protein ( Homo sapiens ... 31 1.9
AK093101-1|BAC04056.1| 645|Homo sapiens protein ( Homo sapiens ... 30 5.7
U52153-1|AAB07044.1| 423|Homo sapiens inwardly rectifying potas... 29 9.9
U24660-1|AAC50258.1| 423|Homo sapiens hiGIRK2 protein. 29 9.9
S78685-1|AAB34738.2| 407|Homo sapiens ATP-sensitive inwardly re... 29 9.9
L78480-1|AAB02277.1| 423|Homo sapiens inwardly rectifying K+ ch... 29 9.9
D87327-1|BAA13331.1| 423|Homo sapiens G protein-coupled inward ... 29 9.9
BC101547-1|AAI01548.1| 423|Homo sapiens potassium inwardly-rect... 29 9.9
>BC035026-1|AAH35026.1| 645|Homo sapiens family with sequence
similarity 47, member B protein.
Length = 645
Score = 33.1 bits (72), Expect = 0.61
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 243 RPSNLAPLPPSTSPRHVRAEPSKTTIN 163
R S+L P PP T H+R EPSKT ++
Sbjct: 291 RVSHLHPEPPETGVSHLRPEPSKTQVS 317
>AL645585-1|CAI41598.1| 645|Homo sapiens family with sequence
similarity 47, member B protein.
Length = 645
Score = 33.1 bits (72), Expect = 0.61
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 243 RPSNLAPLPPSTSPRHVRAEPSKTTIN 163
R S+L P PP T H+R EPSKT ++
Sbjct: 291 RVSHLHPEPPETGVSHLRPEPSKTQVS 317
>BX842568-3|CAI40150.1| 1035|Homo sapiens family with sequence
similarity 47, member C protein.
Length = 1035
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 243 RPSNLAPLPPSTSPRHVRAEPSKTTIN 163
R S+L P PP T H+R EP KT ++
Sbjct: 434 RGSHLRPEPPETGVSHLRPEPPKTRVS 460
Score = 30.3 bits (65), Expect = 4.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 237 SNLAPLPPSTSPRHVRAEPSKTTIN 163
S+L P PP T H+R EPS+T ++
Sbjct: 496 SHLCPEPPKTRVSHLRPEPSETGVS 520
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 243 RPSNLAPLPPSTSPRHVRAEPSKT 172
R S+L P PP T H+R EP KT
Sbjct: 614 RVSHLRPEPPETGVSHLRPEPPKT 637
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 243 RPSNLAPLPPSTSPRHVRAEPSKTTIN 163
R S+L P PP T H+R EP K ++
Sbjct: 722 RVSHLCPEPPETGVSHLRPEPPKPRVS 748
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 237 SNLAPLPPSTSPRHVRAEPSKTTIN 163
S+L P PP T H+R +P KT ++
Sbjct: 208 SSLRPEPPETGVSHLRPQPPKTQVS 232
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 237 SNLAPLPPSTSPRHVRAEPSKT 172
S+L P PP T H+R EP KT
Sbjct: 544 SHLRPEPPETGVSHLRPEPPKT 565
>AK125992-1|BAC86381.1| 910|Homo sapiens protein ( Homo sapiens
cDNA FLJ44004 fis, clone TESTI4023546, weakly similar
to Sialidase (EC 3.2.1.18). ).
Length = 910
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 243 RPSNLAPLPPSTSPRHVRAEPSKTTIN 163
R S+L P PP T H+R EP KT ++
Sbjct: 309 RGSHLRPEPPETGVSHLRPEPPKTRVS 335
Score = 30.3 bits (65), Expect = 4.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 237 SNLAPLPPSTSPRHVRAEPSKTTIN 163
S+L P PP T H+R EPS+T ++
Sbjct: 371 SHLCPEPPKTRVSHLRPEPSETGVS 395
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 243 RPSNLAPLPPSTSPRHVRAEPSKT 172
R S+L P PP T H+R EP KT
Sbjct: 489 RVSHLRPEPPETGVSHLRPEPPKT 512
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 243 RPSNLAPLPPSTSPRHVRAEPSKTTIN 163
R S+L P PP T H+R EP K ++
Sbjct: 597 RVSHLCPEPPETGVSHLRPEPPKPRVS 623
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 237 SNLAPLPPSTSPRHVRAEPSKTTIN 163
S+L P PP T H+R +P KT ++
Sbjct: 83 SSLRPEPPETGVSHLRPQPPKTQVS 107
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 237 SNLAPLPPSTSPRHVRAEPSKT 172
S+L P PP T H+R EP KT
Sbjct: 419 SHLRPEPPETGVSHLRPEPPKT 440
>AK093101-1|BAC04056.1| 645|Homo sapiens protein ( Homo sapiens
cDNA FLJ35782 fis, clone TESTI2005470, weakly similar to
Streptococcus pneumoniae strain g375 surface protein
PspC ).
Length = 645
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 243 RPSNLAPLPPSTSPRHVRAEPSKTTIN 163
R S+L P P T H+R EPSKT ++
Sbjct: 291 RVSHLHPESPETGVSHLRPEPSKTQVS 317
>U52153-1|AAB07044.1| 423|Homo sapiens inwardly rectifying
potassium channel Kir3.2 protein.
Length = 423
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 268 PRPLHELSPPLQPRPAAPEHVSAPRESRTIKDYYKYD 158
P +H+ P Q R P H+S R R I+ Y + D
Sbjct: 24 PVAIHQPKLPKQARDDLPRHISRDRTKRKIQRYVRKD 60
>U24660-1|AAC50258.1| 423|Homo sapiens hiGIRK2 protein.
Length = 423
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 268 PRPLHELSPPLQPRPAAPEHVSAPRESRTIKDYYKYD 158
P +H+ P Q R P H+S R R I+ Y + D
Sbjct: 24 PVAIHQPKLPKQARDDLPRHISRDRTKRKIQRYVRKD 60
>S78685-1|AAB34738.2| 407|Homo sapiens ATP-sensitive inwardly
rectifying K-channel subunit protein.
Length = 407
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 268 PRPLHELSPPLQPRPAAPEHVSAPRESRTIKDYYKYD 158
P +H+ P Q R P H+S R R I+ Y + D
Sbjct: 8 PVAIHQPKLPKQARDDLPRHISRDRTKRKIQRYVRKD 44
>L78480-1|AAB02277.1| 423|Homo sapiens inwardly rectifying K+
channel protein.
Length = 423
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 268 PRPLHELSPPLQPRPAAPEHVSAPRESRTIKDYYKYD 158
P +H+ P Q R P H+S R R I+ Y + D
Sbjct: 24 PVAIHQPKLPKQARDDLPRHISRDRTKRKIQRYVRKD 60
>D87327-1|BAA13331.1| 423|Homo sapiens G protein-coupled inward
rectifier potassium channel protein.
Length = 423
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 268 PRPLHELSPPLQPRPAAPEHVSAPRESRTIKDYYKYD 158
P +H+ P Q R P H+S R R I+ Y + D
Sbjct: 24 PVAIHQPKLPKQARDDLPRHISRDRTKRKIQRYVRKD 60
>BC101547-1|AAI01548.1| 423|Homo sapiens potassium
inwardly-rectifying channel, subfamily J, member 6
protein.
Length = 423
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 268 PRPLHELSPPLQPRPAAPEHVSAPRESRTIKDYYKYD 158
P +H+ P Q R P H+S R R I+ Y + D
Sbjct: 24 PVAIHQPKLPKQARDDLPRHISRDRTKRKIQRYVRKD 60
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,454,970
Number of Sequences: 237096
Number of extensions: 1041982
Number of successful extensions: 5520
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5506
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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