Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305A06f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5TGZ0 Cluster: UPF0327 protein C1orf151; n=12; Eutheri...    34   1.7  
UniRef50_Q9N4K0 Cluster: UPF0327 protein F54A3.5; n=2; Caenorhab...    34   2.3  
UniRef50_Q5BSC7 Cluster: SJCHGC05055 protein; n=1; Schistosoma j...    33   5.2  

>UniRef50_Q5TGZ0 Cluster: UPF0327 protein C1orf151; n=12;
           Eutheria|Rep: UPF0327 protein C1orf151 - Homo sapiens
           (Human)
          Length = 78

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 16/53 (30%), Positives = 19/53 (35%)
 Frame = +3

Query: 144 KIDMCLTDGIVKTXXXXXXXXXXXXXFLKRRRWPXXXXXXXXXXXXXXNCEHE 302
           K D CL D +VK              F KRR WP              NC+H+
Sbjct: 9   KWDRCLADAVVKIGTGFGLGIVFSLTFFKRRMWPLAFGSGMGLGMAYSNCQHD 61


>UniRef50_Q9N4K0 Cluster: UPF0327 protein F54A3.5; n=2;
           Caenorhabditis|Rep: UPF0327 protein F54A3.5 -
           Caenorhabditis elegans
          Length = 105

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 15/62 (24%), Positives = 21/62 (33%)
 Frame = +3

Query: 117 NNTTDDYSAKIDMCLTDGIVKTXXXXXXXXXXXXXFLKRRRWPXXXXXXXXXXXXXXNCE 296
           + + D+   KID C  D ++K              F K R WP              NC 
Sbjct: 11  SRSEDEVGQKIDRCFADSLLKVTGGVAIGIVASVAFFKSRSWPIWFGSGVGLGTGWSNCR 70

Query: 297 HE 302
           H+
Sbjct: 71  HD 72


>UniRef50_Q5BSC7 Cluster: SJCHGC05055 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC05055 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 91

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 14/56 (25%), Positives = 22/56 (39%)
 Frame = +3

Query: 144 KIDMCLTDGIVKTXXXXXXXXXXXXXFLKRRRWPXXXXXXXXXXXXXXNCEHELNK 311
           K+D C++D ++KT             F KRR WP              NC ++  +
Sbjct: 14  KLDRCISDTLIKTGAGLFGGIIFSVVFAKRRPWPLIFGTGFGLGMGISNCNNDFKQ 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,926,943
Number of Sequences: 1657284
Number of extensions: 7668795
Number of successful extensions: 15781
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15770
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)