Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305A06f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC070388-1|AAH70388.1|   78|Homo sapiens chromosome 1 open readi...    34   0.26 
AL031727-3|CAI19017.1|   78|Homo sapiens chromosome 1 open readi...    34   0.26 

>BC070388-1|AAH70388.1|   78|Homo sapiens chromosome 1 open reading
           frame 151 protein.
          Length = 78

 Score = 34.3 bits (75), Expect = 0.26
 Identities = 16/53 (30%), Positives = 19/53 (35%)
 Frame = +3

Query: 144 KIDMCLTDGIVKTXXXXXXXXXXXXXFLKRRRWPXXXXXXXXXXXXXXNCEHE 302
           K D CL D +VK              F KRR WP              NC+H+
Sbjct: 9   KWDRCLADAVVKIGTGFGLGIVFSLTFFKRRMWPLAFGSGMGLGMAYSNCQHD 61


>AL031727-3|CAI19017.1|   78|Homo sapiens chromosome 1 open reading
           frame 151 protein.
          Length = 78

 Score = 34.3 bits (75), Expect = 0.26
 Identities = 16/53 (30%), Positives = 19/53 (35%)
 Frame = +3

Query: 144 KIDMCLTDGIVKTXXXXXXXXXXXXXFLKRRRWPXXXXXXXXXXXXXXNCEHE 302
           K D CL D +VK              F KRR WP              NC+H+
Sbjct: 9   KWDRCLADAVVKIGTGFGLGIVFSLTFFKRRMWPLAFGSGMGLGMAYSNCQHD 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,612,826
Number of Sequences: 237096
Number of extensions: 1147357
Number of successful extensions: 1992
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)