Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305A04f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 28 0.058
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 24 0.71
AM712904-1|CAN84643.1| 86|Tribolium castaneum hypothetical pro... 21 5.0
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 21 6.6
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 6.6
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 21 6.6
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 6.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 21 8.7
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 27.9 bits (59), Expect = 0.058
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +1
Query: 244 PTKRRRCSPFAASPSTSPGLK-----TSESKPSSFGESVSAPVKITPERMAQE 387
P + +P ++S TSP TS P+S + SAP+ I +R A +
Sbjct: 13 PAPQSAATPISSSGMTSPAAAPPPATTSSGSPASVASNASAPLHIPAKRAAYD 65
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 24.2 bits (50), Expect = 0.71
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +2
Query: 311 QNRNHLHLENPLVHL*KLPQNAWHKRFMMRLNDCIDVDSCAWPTALLHH---AHH 466
+ N LH + +H QN H+ +N C + + A+LHH +HH
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNRCHPLSLSSDHQAMLHHNPMSHH 355
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 338 SPNEDGFDSDVFNPGLVLGLAANG 267
SP F S + N G+ G+A NG
Sbjct: 43 SPQGASFGSSMLNSGMPGGMAMNG 66
>AM712904-1|CAN84643.1| 86|Tribolium castaneum hypothetical
protein protein.
Length = 86
Score = 21.4 bits (43), Expect = 5.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 26 LKHRTLL*LENELYIFFVYYLYGA*Y 103
+KH L L N+ I F YY Y A Y
Sbjct: 46 VKHFHPLALSNKNAIDFNYYYYAATY 71
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 195 RHFLFTPNEILWF 157
RH L T N+++WF
Sbjct: 183 RHGLETLNQLIWF 195
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 349 APVKITPERMAQEIYDEIKRLH 414
APVKI+ + + + K+LH
Sbjct: 488 APVKISVQEVLNRVRKPTKKLH 509
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 21.0 bits (42), Expect = 6.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 241 LPTKRRRCSPFAASPSTSPGLKTSESKPSSFGESV 345
LPT CS ++SP+ S ++S S SS+ ++
Sbjct: 191 LPTPT--CSEASSSPTPSHSSESSFSAASSYTNTI 223
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 62 LYIFFVYYLY 91
+Y+F VYY+Y
Sbjct: 151 IYLFTVYYIY 160
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -1
Query: 251 FVGNCALDSQSRFLFNVAHAIFFL 180
FV +D+ + F +N+ +FF+
Sbjct: 935 FVAAFQIDNWTSFYYNIIPILFFM 958
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -1
Query: 251 FVGNCALDSQSRFLFNVAHAIFFL 180
FV +D+ + F +N+ +FF+
Sbjct: 935 FVAAFQIDNWTSFYYNIIPILFFM 958
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -1
Query: 251 FVGNCALDSQSRFLFNVAHAIFFL 180
FV +D+ + F +N+ +FF+
Sbjct: 935 FVAAFQIDNWTSFYYNIIPILFFM 958
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -1
Query: 251 FVGNCALDSQSRFLFNVAHAIFFL 180
FV +D+ + F +N+ +FF+
Sbjct: 935 FVAAFQIDNWTSFYYNIIPILFFM 958
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 20.6 bits (41), Expect = 8.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 193 PFSFYAQRNPLVYVYVNEFV 134
PF +Y + PL Y +FV
Sbjct: 23 PFGYYHEEPPLFYEERPDFV 42
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,370
Number of Sequences: 336
Number of extensions: 2822
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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