Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305A04f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   1.5  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    25   1.5  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   8.2  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   8.2  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 449 LHHAHHQVDPKETVHR 496
           +HH H Q  P++ +HR
Sbjct: 625 IHHIHQQQYPRQVIHR 640


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 99  NIIFHFLIFVIKTNSLTYT*TR-GFR-WA*KENGVC 200
           NI+F  L + +   S+TYT  R G   W  K  G C
Sbjct: 246 NIVFMLLTYFLPIGSMTYTYARVGLELWGSKSIGEC 281


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/55 (21%), Positives = 26/55 (47%)
 Frame = -1

Query: 242 NCALDSQSRFLFNVAHAIFFLRPTKSSGLRICQRICFNYEYKKMKNNIKPHTGNT 78
           NC L+ +++ +      + +  P      +IC R      Y++++++I   T NT
Sbjct: 365 NCELECEAKLILENCGCVLYYLPKLYEDTKICSRANARC-YEQIRSSI-AFTANT 417


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/55 (21%), Positives = 26/55 (47%)
 Frame = -1

Query: 242 NCALDSQSRFLFNVAHAIFFLRPTKSSGLRICQRICFNYEYKKMKNNIKPHTGNT 78
           NC L+ +++ +      + +  P      +IC R      Y++++++I   T NT
Sbjct: 365 NCELECEAKLILENCGCVLYYLPKLYEDTKICSRANARC-YEQIRSSI-AFTANT 417


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,308
Number of Sequences: 2352
Number of extensions: 10475
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)