Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305A02f
         (436 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   3.6  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   3.6  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   4.7  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    22   8.2  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -2

Query: 420 ITERDR-PYRPLIPDHVFVVTVYVPFLTHSGNISVRPHN 307
           IT  D+ P  P     VFV  VY   + H  N  VRP N
Sbjct: 322 ITPYDKYPEGPADDRQVFVDLVYSYNMAHDKNNFVRPAN 360


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -2

Query: 420 ITERDR-PYRPLIPDHVFVVTVYVPFLTHSGNISVRPHN 307
           IT  D+ P  P     VFV  VY   + H  N  VRP N
Sbjct: 322 ITPYDKYPEGPADDRQVFVDLVYSYNMAHDKNNFVRPAN 360


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 252 GDPAVGDDPTEGV 214
           GDP + D+PTE V
Sbjct: 574 GDPKIEDNPTESV 586


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 208 ILFRPSFRGIIFARSQRLHSAIA*F*FIGQ 119
           +LFR   R I++ RS   HS++    F+ Q
Sbjct: 7   LLFRQFCRDIVWLRSCSCHSSVCAVSFVMQ 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,926
Number of Sequences: 2352
Number of extensions: 8674
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)