Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305A02f
         (436 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456475-1|CAG30361.1|  142|Homo sapiens dJ508I15.5 protein.           54   2e-07
BC009363-1|AAH09363.1|  142|Homo sapiens translocase of outer mi...    54   2e-07
AL021707-3|CAI21602.1|  142|Homo sapiens protein ( Human DNA seq...    54   2e-07
AK024731-1|BAB14979.1|  142|Homo sapiens protein ( Homo sapiens ...    54   2e-07
AB041906-1|BAB16408.1|  142|Homo sapiens Tom22 protein.                54   2e-07
AB040119-1|BAB03306.1|  142|Homo sapiens mitochondrial import re...    54   2e-07
AK223021-1|BAD96741.1|  142|Homo sapiens mitochondrial import re...    51   1e-06

>CR456475-1|CAG30361.1|  142|Homo sapiens dJ508I15.5 protein.
          Length = 142

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +2

Query: 263 LKEYDDEP-DETLSERLWGLTEMFPECVRNGTYTVTTNTWSGIKGLYGLSRSVMW 424
           L+E DDE  DETLSERLWGLTEMFPE VR+        +    + +Y  SR+ +W
Sbjct: 32  LEEDDDEELDETLSERLWGLTEMFPERVRSAAGATFDLSLFVAQKMYRFSRAALW 86


>BC009363-1|AAH09363.1|  142|Homo sapiens translocase of outer
           mitochondrial membrane 22 homolog (yeast) protein.
          Length = 142

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +2

Query: 263 LKEYDDEP-DETLSERLWGLTEMFPECVRNGTYTVTTNTWSGIKGLYGLSRSVMW 424
           L+E DDE  DETLSERLWGLTEMFPE VR+        +    + +Y  SR+ +W
Sbjct: 32  LEEDDDEELDETLSERLWGLTEMFPERVRSAAGATFDLSLFVAQKMYRFSRAALW 86


>AL021707-3|CAI21602.1|  142|Homo sapiens protein ( Human DNA
           sequence from clone RP3-508I15 on chromosome 22q12-13.
           ).
          Length = 142

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +2

Query: 263 LKEYDDEP-DETLSERLWGLTEMFPECVRNGTYTVTTNTWSGIKGLYGLSRSVMW 424
           L+E DDE  DETLSERLWGLTEMFPE VR+        +    + +Y  SR+ +W
Sbjct: 32  LEEDDDEELDETLSERLWGLTEMFPERVRSAAGATFDLSLFVAQKMYRFSRAALW 86


>AK024731-1|BAB14979.1|  142|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21078 fis, clone CAS02162. ).
          Length = 142

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +2

Query: 263 LKEYDDEP-DETLSERLWGLTEMFPECVRNGTYTVTTNTWSGIKGLYGLSRSVMW 424
           L+E DDE  DETLSERLWGLTEMFPE VR+        +    + +Y  SR+ +W
Sbjct: 32  LEEDDDEELDETLSERLWGLTEMFPERVRSAAGATFDLSLFVAQKMYRFSRAALW 86


>AB041906-1|BAB16408.1|  142|Homo sapiens Tom22 protein.
          Length = 142

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +2

Query: 263 LKEYDDEP-DETLSERLWGLTEMFPECVRNGTYTVTTNTWSGIKGLYGLSRSVMW 424
           L+E DDE  DETLSERLWGLTEMFPE VR+        +    + +Y  SR+ +W
Sbjct: 32  LEEDDDEELDETLSERLWGLTEMFPERVRSAAGATFDLSLFVAQKMYRFSRAALW 86


>AB040119-1|BAB03306.1|  142|Homo sapiens mitochondrial import
           receptor Tom22 protein.
          Length = 142

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +2

Query: 263 LKEYDDEP-DETLSERLWGLTEMFPECVRNGTYTVTTNTWSGIKGLYGLSRSVMW 424
           L+E DDE  DETLSERLWGLTEMFPE VR+        +    + +Y  SR+ +W
Sbjct: 32  LEEDDDEELDETLSERLWGLTEMFPERVRSAAGATFDLSLFVAQKMYRFSRAALW 86


>AK223021-1|BAD96741.1|  142|Homo sapiens mitochondrial import
           receptor Tom22 variant protein.
          Length = 142

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +2

Query: 263 LKEYDDEP-DETLSERLWGLTEMFPECVRNGTYTVTTNTWSGIKGLYGLSRSVMW 424
           L+E DDE  DETLSER WGLTEMFPE VR+        +    + +Y  SR+ +W
Sbjct: 32  LEEDDDEELDETLSERPWGLTEMFPERVRSAAGATFDLSLFVAQKMYRFSRAALW 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,459,037
Number of Sequences: 237096
Number of extensions: 1119501
Number of successful extensions: 1880
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1880
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)