Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304H12f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8F5M8 Cluster: FemAB family protein; n=9; Leptospira i...    36   0.74 
UniRef50_A0YW39 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  
UniRef50_Q4UJ34 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  
UniRef50_A0CG75 Cluster: Chromosome undetermined scaffold_179, w...    32   9.2  

>UniRef50_Q8F5M8 Cluster: FemAB family protein; n=9; Leptospira
           interrogans|Rep: FemAB family protein - Leptospira
           interrogans
          Length = 709

 Score = 35.5 bits (78), Expect = 0.74
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +1

Query: 328 MQYYITKLISYRKLFVVFFSKNIDQRNIEKIWSKSS*NVTL 450
           + +    L S++ LF +   KNIDQ++I KIW  S+ +++L
Sbjct: 5   LMHLFAPLPSWKNLFSILSFKNIDQKSISKIWLTSTSDISL 45


>UniRef50_A0YW39 Cluster: Putative uncharacterized protein; n=1;
           Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
           protein - Lyngbya sp. PCC 8106
          Length = 198

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 397 DQRNIEKIWSKSS*NVTLCQKYIFVIIFRRLRVK-ASSHPC 516
           D  NIEK+WS     VT   K   +II+ RL++K +SSH C
Sbjct: 129 DFSNIEKVWSFKESKVTPLLK---IIIYERLQLKGSSSHGC 166


>UniRef50_Q4UJ34 Cluster: Putative uncharacterized protein; n=1;
           Theileria annulata|Rep: Putative uncharacterized protein
           - Theileria annulata
          Length = 1179

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 436 MNFCSKFFRYFVDRCFSKKKP 374
           +N+C+K F+YF ++CF K  P
Sbjct: 212 INYCNKCFKYFCNQCFIKHSP 232


>UniRef50_A0CG75 Cluster: Chromosome undetermined scaffold_179,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_179,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 236

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 369 ICGFFFEKHRSTKYRKNLEQKFIKCNFMS 455
           +CG  FE  R  K +KN+EQ+ I+ N  S
Sbjct: 67  VCGVIFEVSRRKKLKKNIEQRLIQENMYS 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,303,300
Number of Sequences: 1657284
Number of extensions: 7059981
Number of successful extensions: 15345
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15342
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)