Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304H12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   2.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   2.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   2.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   8.7  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 140 NRPTVTNNLSTFNKRSGVA 196
           N P+ TNN + FN  S  A
Sbjct: 130 NTPSATNNNTNFNNNSNGA 148


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 140 NRPTVTNNLSTFNKRSGVA 196
           N P+ TNN + FN  S  A
Sbjct: 78  NTPSATNNNTNFNNNSNGA 96


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 140 NRPTVTNNLSTFNKRSGVA 196
           N P+ TNN + FN  S  A
Sbjct: 261 NTPSATNNNTNFNNNSNGA 279


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 410 IFR*SMFFEKKTTNNFL*LISLVI*YCIAL 321
           IF  S+ FE+K   NF     L+I  C+A+
Sbjct: 110 IFDESVIFERKVMKNF---AILIIPTCVAM 136


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 337 YITKLISYRKLFVVFFSKNIDQR 405
           Y+T    YRK    F  ++IDQR
Sbjct: 642 YMTNWAFYRKAEGKFVPEHIDQR 664


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 482 ADCGSRLAVIHAV 520
           A CG++ A++HAV
Sbjct: 358 ATCGTKNALLHAV 370


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,029
Number of Sequences: 336
Number of extensions: 2162
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)