Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304H11f
         (393 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   2.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   2.5  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.4  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.4  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.4  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.4  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.4  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   4.4  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    21   5.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   7.6  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 84  VNISFYVLVTLMT**YRSITVTL 152
           VN +F+V+V ++   YR++T  L
Sbjct: 161 VNFAFFVVVKMLLVRYRNLTKQL 183


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 84  VNISFYVLVTLMT**YRSITVTL 152
           VN +F+V+V ++   YR++T  L
Sbjct: 161 VNFAFFVVVKMLLVRYRNLTKQL 183


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 95  FLCTCNTDDLIIPFNNCHADI 157
           F  TC  D    PF++ H D+
Sbjct: 124 FKSTCKMDITWFPFDDQHCDM 144


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 95  FLCTCNTDDLIIPFNNCHADI 157
           F  TC  D    PF++ H D+
Sbjct: 124 FKSTCKMDITWFPFDDQHCDM 144


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 95  FLCTCNTDDLIIPFNNCHADI 157
           F  TC  D    PF++ H D+
Sbjct: 124 FKSTCKMDITWFPFDDQHCDM 144


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 95  FLCTCNTDDLIIPFNNCHADI 157
           F  TC  D    PF++ H D+
Sbjct: 124 FKSTCKIDITWFPFDDQHCDM 144


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 95  FLCTCNTDDLIIPFNNCHADI 157
           F  TC  D    PF++ H D+
Sbjct: 124 FKSTCKMDITWFPFDDQHCDM 144


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 288 NTNSTKNNHYTYSVNYY 238
           +TN T   HYTY +  Y
Sbjct: 142 STNPTPPPHYTYQIIPY 158


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -3

Query: 199 DMSLINLTFR-ATRIYVSVTVIER 131
           +M  + +  + A R+Y SV VIER
Sbjct: 43  EMKYLEMVLKEAQRLYPSVPVIER 66


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 5/20 (25%), Positives = 9/20 (45%)
 Frame = +2

Query: 107 CNTDDLIIPFNNCHADIDPC 166
           CN  + +    +C   + PC
Sbjct: 547 CNNPECLFDGRDCEESLQPC 566


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,991
Number of Sequences: 336
Number of extensions: 1297
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)