Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304H08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   0.41 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.54 
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   1.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.6  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 257 GIKSTFQSRPRPYVSSGAGALNLANSSSNGVIDADSPP 144
           G+ ST  S P P +S+  G    A+++SN +     PP
Sbjct: 126 GVISTNTSPPSPILSNRFGENEEADAASNVISSTPLPP 163


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 241 NVDLIPKFLMANGLLVKLLIHTGVTRYL 324
           N+D IP  ++   L+  +LIH G T+++
Sbjct: 446 NIDPIPLVVVLTHLIPFMLIHQGETQFV 473


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 232 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYL 324
           R W   +I KFL   GL+   L   G+  +L
Sbjct: 181 RKWQNKVIQKFLWTGGLVTSALFAYGLRIWL 211


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 232 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYL 324
           R W   +I KFL   GL+   L   G+  +L
Sbjct: 414 RKWQNKVIQKFLWTGGLVTSALFAYGLRIWL 444


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 232 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYL 324
           R W   +I KFL   GL+   L   G+  +L
Sbjct: 414 RKWQNKVIQKFLWTGGLVTSALFAYGLRIWL 444


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 202 PAP-DETYGRGRDWNVDLIPKFLMANG 279
           P+P  E   R  D N+D   K+ M+NG
Sbjct: 261 PSPLYELVDRRNDENIDAQVKYWMSNG 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,275
Number of Sequences: 336
Number of extensions: 2600
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)