Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304H08f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    26   0.67 
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            25   1.2  
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    23   4.7  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   4.7  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   6.2  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 26.2 bits (55), Expect = 0.67
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -1

Query: 239 QSRPRPY-VSSGAGALNLANSSSNGVIDADSPP*YLLRSMCKTFFPETDNMPLKIHSFKP 63
           QSRP+   V S A  L        GV  + SP   +  S   +   +  ++PL +  F+P
Sbjct: 68  QSRPQAVTVRSSAPMLPKGGLPPKGVPSSASP---VYMSPASSLMTKATSLPLGVPPFRP 124

Query: 62  VPR 54
           +P+
Sbjct: 125 IPK 127


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 15/73 (20%), Positives = 31/73 (42%)
 Frame = +1

Query: 280 LLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLI 459
           + V  + H     + E  ++E         IS  P+D K+  A    G+  + +  N  +
Sbjct: 85  ITVVYVTHKKQAMFNEIPTVEPDISNSSTNISHRPIDLKDIKARGRFGVVWRAQLGNQEV 144

Query: 460 YVQISREEDAKTW 498
            V+I   ++ ++W
Sbjct: 145 AVKIFPMQERQSW 157


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -1

Query: 242 FQSRPRPYVSSGAGALNLANSSSNGV 165
           FQ+RPR Y    A AL     SS  V
Sbjct: 253 FQTRPRFYADRIASALGFGTDSSTYV 278


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -1

Query: 182 SSSNGVIDADSPP*YLLRSMCKTFFPETDNMPLKIHSFKPVPR 54
           S++ GV  + SP   +  S   +   +  ++PL +  F+P+P+
Sbjct: 93  SAAEGVPSSASP---VYMSPASSLMTKATSLPLGVPPFRPIPK 132


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -1

Query: 263 NLGIKSTFQSRPRPYVSSGAGALNLANSSSNGVID 159
           N  I  +  S   P+ S G+G  +   SS + +ID
Sbjct: 5   NGSISPSSSSSSLPFASLGSGKTSSKQSSGSAIID 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,092
Number of Sequences: 2352
Number of extensions: 11123
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)