Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304H06f
         (493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   4.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   6.1  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.0  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   8.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.0  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 166 FVVCGIILVFLSKMSSMNSWEAYRRRXFP 252
           FVVC ++L+F    +  ++   Y R  FP
Sbjct: 5   FVVCCLLLMFSYTDNVSSTRTKYLRTNFP 33


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 139 YKRILIGMEFVVCGIILVFLSKMSSMNSW 225
           Y  I   ++F +C  ILV    + S  SW
Sbjct: 74  YSAIFTVIDFSLCKAILVHAITIRSTFSW 102


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 322 GLHHHQTYPMLVLSH 366
           G H+HQ Y   VLS+
Sbjct: 63  GYHNHQNYNSNVLSN 77


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 322 GLHHHQTYPMLVLSH 366
           G H+HQ Y   VLS+
Sbjct: 63  GYHNHQNYNSNVLSN 77


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 219 IHRGHFTQEYQNDTTNYKFHPYQDS 145
           I+  ++ Q YQ +  NY  + Y  S
Sbjct: 372 INHQNYVQGYQGEHPNYNHYGYHYS 396


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 322 GLHHHQTYPMLVLSH 366
           G H+HQ Y   VLS+
Sbjct: 63  GYHNHQNYNSNVLSN 77


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 322 GLHHHQTYPMLVLSH 366
           G H+HQ Y   VLS+
Sbjct: 63  GYHNHQNYNSNVLSN 77


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 219 IHRGHFTQEYQNDTTNYKFHPYQDS 145
           I+  ++ Q YQ +  NY  + Y  S
Sbjct: 320 INHQNYVQGYQGEHPNYNHYGYHYS 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,975
Number of Sequences: 336
Number of extensions: 2503
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)