Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304H06f
         (493 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121643-1|AAM51970.1|  254|Drosophila melanogaster LD09733p pro...    30   2.0  
AE014297-824|AAF54294.1|  254|Drosophila melanogaster CG8359-PA ...    30   2.0  
AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB...    28   6.0  
AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA...    28   6.0  

>AY121643-1|AAM51970.1|  254|Drosophila melanogaster LD09733p
           protein.
          Length = 254

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -1

Query: 376 SFFNGIIPTLDKFDDDEVLEFQMGVLQLLKNIK 278
           +FF+ I P + +   D  L+FQ+ VL++L+N K
Sbjct: 220 AFFDTIKPHMQQMCADRKLDFQIEVLKILRNFK 252


>AE014297-824|AAF54294.1|  254|Drosophila melanogaster CG8359-PA
           protein.
          Length = 254

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -1

Query: 376 SFFNGIIPTLDKFDDDEVLEFQMGVLQLLKNIK 278
           +FF+ I P + +   D  L+FQ+ VL++L+N K
Sbjct: 220 AFFDTIKPHMQQMCADRKLDFQIEVLKILRNFK 252


>AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB,
            isoform B protein.
          Length = 4685

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 165  FHPYQDSLVSPASVESSDSNYTEIYFNDFE 76
            F  Y D LV P  ++S  S+  +I+  DFE
Sbjct: 2906 FRVYHDRLVDPYDIKSFKSSIRDIFKKDFE 2935


>AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA,
            isoform A protein.
          Length = 4543

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 165  FHPYQDSLVSPASVESSDSNYTEIYFNDFE 76
            F  Y D LV P  ++S  S+  +I+  DFE
Sbjct: 2764 FRVYHDRLVDPYDIKSFKSSIRDIFKKDFE 2793


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,370,981
Number of Sequences: 53049
Number of extensions: 374807
Number of successful extensions: 806
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)