Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304H06f
         (493 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr...    32   0.26 
Z54237-1|CAA90987.2|  445|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical ...    28   3.2  
AF022967-5|AAB69878.1|  537|Caenorhabditis elegans Hypothetical ...    27   7.4  

>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical
           protein ZK1067.2 protein.
          Length = 2219

 Score = 31.9 bits (69), Expect = 0.26
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -1

Query: 421 DSYSYNESKTMNRHLSFFNG 362
           D Y YNES +M  HL F NG
Sbjct: 406 DQYQYNESTSMENHLGFHNG 425


>Z54237-1|CAA90987.2|  445|Caenorhabditis elegans Hypothetical
           protein T11B7.1 protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 400 SKTMNRHLS-FFNGIIPTLDKFDDDEVLEFQMGVLQLLK 287
           +KT NR  +    G+I  L KF DD+ LE +  +LQL K
Sbjct: 269 NKTENRSPTPTLQGLIEILQKFSDDQKLEPECKMLQLHK 307


>AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical
           protein Y51H7BM.1 protein.
          Length = 433

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = -3

Query: 164 SIPIKILL*VRPLSNPPILTTQKFIL 87
           SI +KIL  ++ +SNPP+L  +KF+L
Sbjct: 119 SICVKILR-IKGISNPPLLPEKKFVL 143


>AF022967-5|AAB69878.1|  537|Caenorhabditis elegans Hypothetical
           protein C13A2.6 protein.
          Length = 537

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -1

Query: 469 YEECSYPLDAKMMKFMDSYSYNESKTMNRHLSFFNGIIPTLDKFDDDEVLEFQMG 305
           Y+  S+PL A  +  + +Y Y  SK++ ++    N ++ +   F  D V+   +G
Sbjct: 79  YDPSSHPLPASHVYIVSAYYYPNSKSLGKNAVALNMVVDS-KNFPVDNVVYSVIG 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,324,886
Number of Sequences: 27780
Number of extensions: 202346
Number of successful extensions: 452
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)