Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304H06f
         (493 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    25   0.58 
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   3.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   5.4  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   5.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   5.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   5.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.1  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   9.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.4  

>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 51  HFNNQLH*YNFNNFNLK 1
           ++NN  + YN+NN+N K
Sbjct: 323 NYNNNNYKYNYNNYNKK 339


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 54  IHFNNQLH*YNFNNFN 7
           IH NN  +  N+NN+N
Sbjct: 90  IHNNNNYNNNNYNNYN 105


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = -2

Query: 198 QEYQNDTTNYKFHPYQDSLVSPASVESSDSNYTEIYFNDFELLLT*IEIHFNNQ 37
           Q+YQ     Y+   Y D ++   ++++ D +     F DF + L  +  H + Q
Sbjct: 446 QQYQQSLPVYQ---YNDLILPGVTIQNVDVSQLVTLFTDFYVDLDAVTGHQSQQ 496


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 51  HFNNQLH*YNFNNFN 7
           ++NN  + YN NN+N
Sbjct: 333 NYNNNYNNYNNNNYN 347


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 112 IGGFDRGRTYKRILIGMEFV 171
           +  +DRG  YK  L+ + F+
Sbjct: 362 MANYDRGVFYKNYLLNVSFI 381


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 112 IGGFDRGRTYKRILIGMEFV 171
           +  +DRG  YK  L+ + F+
Sbjct: 452 MANYDRGVFYKNYLLNVSFI 471


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 292 IIVALPFGIRGLHHHQTYPM 351
           ++V LP     LH+HQ++ M
Sbjct: 348 VVVDLPGVGENLHNHQSFGM 367


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -1

Query: 367 NGIIPTLDKFDDDEVLEFQMGVLQLLKNIK 278
           +G+I  +      ++L F +   QLLK +K
Sbjct: 138 SGLINNVRSVCPPQLLVFDLNTSQLLKQVK 167


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 224 HEFIEDILLRNTKMIPQTT 168
           H F++D+   +   +PQ T
Sbjct: 405 HAFVDDVFQEHKNTLPQYT 423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,977
Number of Sequences: 438
Number of extensions: 2802
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)