Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304H03f
(508 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 160 9e-42
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 71 5e-15
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 57 1e-10
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 25 0.45
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 2.4
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 3.2
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 3.2
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 3.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 9.7
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 160 bits (388), Expect = 9e-42
Identities = 75/131 (57%), Positives = 96/131 (73%)
Frame = +2
Query: 38 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTE 217
+F+GK+YK+ SSENFD+FMK +GVG++TRK ++V+P VEL ++ Y L T+S FK TE
Sbjct: 3 DFLGKRYKLYSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTE 62
Query: 218 MKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAK 397
+KFK GEEFEE+ DG KVKSVCT +GN L QVQK + T REF EMKA+M
Sbjct: 63 IKFKLGEEFEEETVDGRKVKSVCTLDGNKLIQVQKGEK--QTTIEREFSSTEMKAIMKVD 120
Query: 398 DVTCTRVYKVQ 430
D+ CTRVYK+Q
Sbjct: 121 DIICTRVYKIQ 131
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 71.3 bits (167), Expect = 5e-15
Identities = 51/137 (37%), Positives = 70/137 (51%), Gaps = 7/137 (5%)
Frame = +2
Query: 35 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVT---PTVELRKDGDEYNLVTSSTF 205
++F GK ++ S NF+EF K +G + NTV P+ EL K+GDE+ +SS
Sbjct: 2 VQFEGK-FQFVSQNNFEEFAKVLG----DQNLVNTVLQPRPSFELSKNGDEWTFTSSSGD 56
Query: 206 KTTEMKFKPGEEFEE--DRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMK 379
T FK FEE K ++V + EGNT K + D L+VT + EF E+
Sbjct: 57 NTYTKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVTRLYEFSDNELL 116
Query: 380 A-VMTAK-DVTCTRVYK 424
+ T K DV TRVYK
Sbjct: 117 VHISTNKSDVKATRVYK 133
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 56.8 bits (131), Expect = 1e-10
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +2
Query: 38 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVT---PTVELRKDGDEYNLVTSSTFK 208
+F GK ++ S NF+EF K +G + NTV P+ EL K+GDE+ +SS
Sbjct: 1 QFEGK-FQFVSQNNFEEFAKVLG----DQNLVNTVLQPRPSFELSKNGDEWTFTSSSGDN 55
Query: 209 TTEMKFKPGEEFEE--DRADGAKVKSVCTFEGNTLKQVQKAPDGLEVT 346
T FK FEE K ++V + EGNT K + D L+VT
Sbjct: 56 TYTKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVT 103
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 25.0 bits (52), Expect = 0.45
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 411 PESTRSSKDSIPRSGVGAADSRTSRGHNYVYL 506
P ++ +K PR G GAA R SR + YL
Sbjct: 429 PPRSKKNKLKKPRQGDGAAVKRKSREGSTTYL 460
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 222 FISVVLKVEEVTKLYSSPSLRSSTV 148
FIS+++ +E+ + +SP L + T+
Sbjct: 9 FISLIILNDEIYNIIASPQLNNPTL 33
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 22.2 bits (45), Expect = 3.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 284 CTFEGNTLKQVQKAPDGL 337
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 22.2 bits (45), Expect = 3.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 284 CTFEGNTLKQVQKAPDGL 337
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 22.2 bits (45), Expect = 3.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 284 CTFEGNTLKQVQKAPDGL 337
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 92 MKTIGVGLITRKAANTVTPTVELRKDGDEYN 184
MKTI G + V E K G EY+
Sbjct: 513 MKTIKKGSFVTQYVGEVITNEEAEKRGKEYD 543
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,603
Number of Sequences: 438
Number of extensions: 2515
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -