Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304H03f
(508 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g38720.1 68418.m04683 expressed protein predicted protein, Dr... 28 3.1
At5g64260.1 68418.m08073 phosphate-responsive protein, putative ... 27 5.5
At5g63550.1 68418.m07976 expressed protein 27 5.5
At4g31350.1 68417.m04446 expressed protein contains Pfam profile... 27 7.3
At3g19890.1 68416.m02518 F-box family protein contains F-box dom... 27 7.3
At2g17550.1 68415.m02031 expressed protein 27 7.3
At5g09620.1 68418.m01113 octicosapeptide/Phox/Bem1p (PB1) domain... 27 9.6
At4g03480.1 68417.m00475 ankyrin repeat family protein contains ... 27 9.6
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 27 9.6
>At5g38720.1 68418.m04683 expressed protein predicted protein,
Drosophila melanogaster
Length = 306
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 107 VGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADG 265
VG ++ N VEL +D L S+ K K + G+E + ADG
Sbjct: 18 VGKKIQRKKNEKVSNVELSEDPQAAQLQAKSSEKPNRKKIQKGKEIKSSPADG 70
>At5g64260.1 68418.m08073 phosphate-responsive protein, putative
similar to phi-1 (phosphate-induced gene) [Nicotiana
tabacum] GI:3759184; contains Pfam profile PF04674:
Phosphate-induced protein 1 conserved region
Length = 305
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 362 GPEEMKAVMTAKDVTCTRVYKVQ*GLYSEVGSRCRRFTN 478
G + V+TAKDVT R + G + GS RR N
Sbjct: 133 GLRSITVVLTAKDVTVERFCMSRCGTHGSSGSNPRRAAN 171
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 27.5 bits (58), Expect = 5.5
Identities = 29/120 (24%), Positives = 52/120 (43%)
Frame = +2
Query: 44 VGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTEMK 223
+G+K K E+ +E + G G TVTPT E R + + S +T M+
Sbjct: 62 LGEKDKEDDVESEEEEEEEEGSGSKKSSEKETVTPTSE-RPTRERKKVERFSL--STPMR 118
Query: 224 FKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDV 403
P + ++ G ++ + K +KA D L + + FG ++ KA M +++
Sbjct: 119 APPSKSVSIEKGRGTPLREIPNVAHKLSK--RKADDNLMLLHTILFG-KKAKAQMVKRNI 175
>At4g31350.1 68417.m04446 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function, DUF266
Length = 711
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 501 KHNCXRGMFVNRRHRLPTSE*SPYWTL*TLVQVTSLAVITAFISSGPNSL 352
+ +C R + V R P W + TLV + ++ VITAFI NS+
Sbjct: 357 RSHCLRNIAVMSESRQRPPFKGPRWII-TLVVLVTVVVITAFIYPPRNSV 405
>At3g19890.1 68416.m02518 F-box family protein contains F-box domain
Pfam:PF00646
Length = 410
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 152 VELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKV 274
VE+RKD LV SS++ + K EE EED+ K+
Sbjct: 354 VEVRKDVYRSALVCSSSYVPSLEKINQIEEEEEDKCKSIKM 394
>At2g17550.1 68415.m02031 expressed protein
Length = 765
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/85 (18%), Positives = 33/85 (38%)
Frame = +2
Query: 68 SSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFE 247
+ + F + + + G + + N R G ++ L + T T + +PG +
Sbjct: 178 ADKRFKDCSRIVDSGCVVARDENKERLFTRTRSFGRDFTLKSDRTAPTRIVVLRPGLQRA 237
Query: 248 EDRADGAKVKSVCTFEGNTLKQVQK 322
D D S T EG+ +++
Sbjct: 238 YDYEDSLTTSSGTTMEGSRGSSIEE 262
>At5g09620.1 68418.m01113 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein predicted proteins,
Arabidopsis thaliana and Drosophila melanogaster
contains Pfam profile PF00564: PB1 domain
Length = 531
Score = 26.6 bits (56), Expect = 9.6
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +2
Query: 197 STFKTTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYV 352
S+ ++ +++F+ +E+ + KVK +C++ G ++Q P ++TYV
Sbjct: 15 SSPRSRDVEFENPSPWEDQQQQNYKVKLMCSYGG----KIQPRPHDNQLTYV 62
>At4g03480.1 68417.m00475 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 617
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 277 IRMHIRRQHPQASPEGPRRS*SHLRQGIRP 366
+R H+ R P+ASP P S S+ R + P
Sbjct: 2 VRSHLLRATPEASPLKPASSPSNCRLSLSP 31
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc finger
ZZ type
Length = 5098
Score = 26.6 bits (56), Expect = 9.6
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = +2
Query: 167 DGDEYNLVTSSTFKTTEM-KFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEV 343
DG E F E+ + P E D D + CTF+G +K D L +
Sbjct: 156 DGSEKQYDILPDFSPAEVAELWPAFSGEHDNMDAQSLVK-CTFQGGRCSNEEKPVDRLLI 214
Query: 344 TYVREFGPEEMKAVMTAK 397
T + E +++A K
Sbjct: 215 TLMSECIESDVQAQSVVK 232
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,794,751
Number of Sequences: 28952
Number of extensions: 216428
Number of successful extensions: 686
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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