Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304H02f
(405 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical pr... 45 2e-05
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 41 4e-04
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 40 5e-04
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 40 5e-04
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 36 0.015
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 36 0.015
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 35 0.019
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 35 0.026
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 35 0.026
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 34 0.034
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 34 0.034
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 33 0.059
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 33 0.059
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 31 0.42
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 31 0.42
Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical pr... 30 0.73
AF003132-2|AAB54134.2| 568|Caenorhabditis elegans Hypothetical ... 30 0.73
AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 prote... 28 2.2
AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal prote... 28 2.2
AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protei... 28 2.2
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z77663-11|CAB01211.3| 324|Caenorhabditis elegans Hypothetical p... 26 9.0
Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical p... 26 9.0
Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical p... 26 9.0
>Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical
protein M88.6b protein.
Length = 594
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2
Query: 125 GNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSX 304
G S+ LD++ +KI + ELK++++L L +N+I L+ G F +K+++ L
Sbjct: 149 GLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLNENDIRVLKTGTFDGMKNLKKLTLQN 208
Query: 305 XKISYIQPGVFK 340
+ IQ G F+
Sbjct: 209 CNLEIIQKGAFR 220
Score = 44.0 bits (99), Expect = 4e-05
Identities = 31/100 (31%), Positives = 51/100 (51%)
Frame = +2
Query: 38 LSANIVKSSMYLNKLIISGLEPNISLIGLGNSSVAILDISCSKITNVQKLHLNELKRLDD 217
L N+ + L + +S L+PN S LG S+ +L + ++I ++K LK L
Sbjct: 98 LFENVFAKQVKLERCGLSTLQPN-SFQSLGGSA-ELLSLRENRIKKLEKGLFTGLKSLKT 155
Query: 218 LKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQPGVF 337
L L N I +++VGAF +LK + L + I ++ G F
Sbjct: 156 LDLAMNKIQEIDVGAFEELKKVEELLLNENDIRVLKTGTF 195
Score = 37.5 bits (83), Expect = 0.004
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 218 LKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQPGVFKD 343
L L +N I KLE G F+ LKS++ LD + KI I G F++
Sbjct: 132 LSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEE 173
Score = 33.5 bits (73), Expect = 0.059
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 125 GNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSX 304
G ++ L + + +QK L L+ L L NN+ ++ FS LK++R LD
Sbjct: 197 GMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSALKNLRVLDLGS 256
Query: 305 XKISYIQ 325
KIS ++
Sbjct: 257 NKISNVE 263
>Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical
protein M88.6a protein.
Length = 610
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2
Query: 125 GNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSX 304
G S+ LD++ +KI + ELK++++L L +N+I L+ G F +K+++ L
Sbjct: 149 GLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLNENDIRVLKTGTFDGMKNLKKLTLQN 208
Query: 305 XKISYIQPGVFK 340
+ IQ G F+
Sbjct: 209 CNLEIIQKGAFR 220
Score = 44.0 bits (99), Expect = 4e-05
Identities = 31/100 (31%), Positives = 51/100 (51%)
Frame = +2
Query: 38 LSANIVKSSMYLNKLIISGLEPNISLIGLGNSSVAILDISCSKITNVQKLHLNELKRLDD 217
L N+ + L + +S L+PN S LG S+ +L + ++I ++K LK L
Sbjct: 98 LFENVFAKQVKLERCGLSTLQPN-SFQSLGGSA-ELLSLRENRIKKLEKGLFTGLKSLKT 155
Query: 218 LKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQPGVF 337
L L N I +++VGAF +LK + L + I ++ G F
Sbjct: 156 LDLAMNKIQEIDVGAFEELKKVEELLLNENDIRVLKTGTF 195
Score = 37.5 bits (83), Expect = 0.004
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 218 LKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQPGVFKD 343
L L +N I KLE G F+ LKS++ LD + KI I G F++
Sbjct: 132 LSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEE 173
Score = 33.5 bits (73), Expect = 0.059
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 125 GNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSX 304
G ++ L + + +QK L L+ L L NN+ ++ FS LK++R LD
Sbjct: 197 GMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSALKNLRVLDLGS 256
Query: 305 XKISYIQ 325
KIS ++
Sbjct: 257 NKISNVE 263
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 40.7 bits (91), Expect = 4e-04
Identities = 21/67 (31%), Positives = 39/67 (58%)
Frame = +2
Query: 128 NSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXX 307
+S + L+++ +KI ++ ++L L L+L NNI + FS+L+++R+LD S
Sbjct: 439 SSELKSLNLAHNKIHSISSRSFSDLDNLQQLRLSHNNIRTITSMTFSNLRNLRYLDLSHN 498
Query: 308 KISYIQP 328
+I I P
Sbjct: 499 RIIKILP 505
Score = 39.9 bits (89), Expect = 7e-04
Identities = 29/99 (29%), Positives = 47/99 (47%)
Frame = +2
Query: 47 NIVKSSMYLNKLIISGLEPNISLIGLGNSSVAILDISCSKITNVQKLHLNELKRLDDLKL 226
NI++ + NKL LE S + +S+ +LD++ + I V L L L
Sbjct: 678 NILQLHVNNNKLSRIPLEALSSTM----ASLHLLDLAHNNIKIVDSSQLTSFGNLSILSF 733
Query: 227 YKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQPGVFKD 343
N + +E GAF +L S++ LD S ++ P F+D
Sbjct: 734 ANNKVDSIEDGAFENLLSLKILDLSNNPVTSWSPTAFRD 772
Score = 33.1 bits (72), Expect = 0.078
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 146 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQ 325
+DIS + I +V E ++L +KL N I L G F +S+ LD S I ++
Sbjct: 611 IDISHNGIIDVDSDAFCECRKLSHIKLSHNYIRNLWKGTFQYQESLHTLDISFNDILFLH 670
Query: 326 PGVF 337
G F
Sbjct: 671 QGTF 674
Score = 31.9 bits (69), Expect = 0.18
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +2
Query: 110 SLIGLGNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRF 289
S+ + S+ L+ISC+KI + + L L ++ L + NN+ ++ AF L ++
Sbjct: 789 SMPKFSHRSIQSLNISCNKIYELSEKDLAPLTKVVALDISHNNLKQISSMAFEPLIHLKQ 848
Query: 290 LDWSXXKISYI 322
L+ S I+++
Sbjct: 849 LNVSANPITHL 859
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 146 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGA---FSDLKSMR 286
LD+S ++I + L +L LD L L NN+ +++ A FSDL+S++
Sbjct: 493 LDLSHNRIIKILPSALYQLPALDVLHLDHNNLNEIDRDAFRSFSDLQSLK 542
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 40.3 bits (90), Expect = 5e-04
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +2
Query: 131 SSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXK 310
S + LD+S +K+ ++ +N L L+ LKL +N + LE G F K ++ LD S
Sbjct: 165 SGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENL 224
Query: 311 ISYIQPG 331
I I+ G
Sbjct: 225 IGDIEEG 231
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 40.3 bits (90), Expect = 5e-04
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +2
Query: 131 SSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXK 310
S + LD+S +K+ ++ +N L L+ LKL +N + LE G F K ++ LD S
Sbjct: 165 SGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENL 224
Query: 311 ISYIQPG 331
I I+ G
Sbjct: 225 IGDIEEG 231
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 35.5 bits (78), Expect = 0.015
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +2
Query: 38 LSANIVKSSMYLNKLIISGLE-PNISLIGLGNSSVAILDISCSKITNVQKLHLNELKRLD 214
+ AN + L +L ++ + NIS NSS+ +L +S +++ + ++ L L
Sbjct: 260 IPANSLSGLKQLRQLYLAHNKISNISSNAFTNSSIVVLVLSSNELKTLTAGIISGLPNLQ 319
Query: 215 DLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQPGVF 337
+ N I + AF D S+ LD + +++ I P F
Sbjct: 320 QVSFRDNQIKTINRNAFYDAASLVMLDLAKNQLTEIAPTTF 360
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 35.5 bits (78), Expect = 0.015
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 146 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQ 325
LD+S + IT +Q L L L LY NNI L+ F L S++ L + +++ I+
Sbjct: 316 LDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIR 375
Query: 326 PGVF 337
G F
Sbjct: 376 RGTF 379
Score = 26.6 bits (56), Expect = 6.8
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 128 NSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXX 307
N + LD+S + IT V L + L+ L L KN+I LE S S+ L +
Sbjct: 115 NLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNGN 174
Query: 308 KIS 316
+++
Sbjct: 175 RLT 177
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 35.5 bits (78), Expect = 0.015
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 146 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQ 325
LD+S + IT +Q L L L LY NNI L+ F L S++ L + +++ I+
Sbjct: 316 LDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIR 375
Query: 326 PGVF 337
G F
Sbjct: 376 RGTF 379
Score = 26.6 bits (56), Expect = 6.8
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 128 NSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXX 307
N + LD+S + IT V L + L+ L L KN+I LE S S+ L +
Sbjct: 115 NLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNGN 174
Query: 308 KIS 316
+++
Sbjct: 175 RLT 177
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 35.1 bits (77), Expect = 0.019
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +2
Query: 125 GNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSX 304
G ++ L I + +T + +L L L L N I +E G F L + +LD S
Sbjct: 363 GMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSN 422
Query: 305 XKISYIQPGVFK 340
KIS + VFK
Sbjct: 423 NKISGFKTSVFK 434
Score = 29.1 bits (62), Expect = 1.3
Identities = 26/92 (28%), Positives = 45/92 (48%)
Frame = +2
Query: 65 MYLNKLIISGLEPNISLIGLGNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNII 244
+YL IIS L+ N L G N + +LD+S + + + L +L L +++ N I
Sbjct: 252 LYLQDNIISTLDGN-RLQGFKN--LEVLDVSNNALYALPSL--KDLPNLKQVRVDGNLIT 306
Query: 245 KLEVGAFSDLKSMRFLDWSXXKISYIQPGVFK 340
K+E AFS+ +++ + I I F+
Sbjct: 307 KIETLAFSNNPNLQLISVQNNNIVQISRNSFE 338
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 34.7 bits (76), Expect = 0.026
Identities = 16/62 (25%), Positives = 35/62 (56%)
Frame = +2
Query: 146 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQ 325
LD++ + I V+ L N+L L ++ L +N++ +L+ G F + ++ L+ S ++ +
Sbjct: 224 LDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVT 283
Query: 326 PG 331
G
Sbjct: 284 EG 285
Score = 33.9 bits (74), Expect = 0.045
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 146 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQ 325
LD++ + IT++ H + L LKL +N+I L +FS L+ + LD + I ++
Sbjct: 176 LDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIREVR 235
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 125 GNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSX 304
G +S+ +LD+S ++I + + +L L L+ N I L G+F L+ + L S
Sbjct: 289 GLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSA 348
Query: 305 XKI 313
I
Sbjct: 349 NSI 351
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 34.7 bits (76), Expect = 0.026
Identities = 16/62 (25%), Positives = 35/62 (56%)
Frame = +2
Query: 146 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQ 325
LD++ + I V+ L N+L L ++ L +N++ +L+ G F + ++ L+ S ++ +
Sbjct: 224 LDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVT 283
Query: 326 PG 331
G
Sbjct: 284 EG 285
Score = 33.9 bits (74), Expect = 0.045
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 146 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQ 325
LD++ + IT++ H + L LKL +N+I L +FS L+ + LD + I ++
Sbjct: 176 LDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIREVR 235
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 125 GNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSX 304
G +S+ +LD+S ++I + + +L L L+ N I L G+F L+ + L S
Sbjct: 289 GLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSA 348
Query: 305 XKI 313
I
Sbjct: 349 NSI 351
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 34.3 bits (75), Expect = 0.034
Identities = 23/65 (35%), Positives = 30/65 (46%)
Frame = +2
Query: 146 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQ 325
LD+ + I N+ + L+ L L L N I KLE F L S+ LD +I I
Sbjct: 285 LDLRVNLIENITAYAFDGLESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNEIKTIP 344
Query: 326 PGVFK 340
VFK
Sbjct: 345 TDVFK 349
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 34.3 bits (75), Expect = 0.034
Identities = 23/65 (35%), Positives = 30/65 (46%)
Frame = +2
Query: 146 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQ 325
LD+ + I N+ + L+ L L L N I KLE F L S+ LD +I I
Sbjct: 285 LDLRVNLIENITAYAFDGLESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNEIKTIP 344
Query: 326 PGVFK 340
VFK
Sbjct: 345 TDVFK 349
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 33.5 bits (73), Expect = 0.059
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +2
Query: 146 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQ 325
+D+S ++I V + LN++K+L + L N + + FSD + LD S +IS +
Sbjct: 429 VDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLF 488
Query: 326 PGVF 337
F
Sbjct: 489 KDAF 492
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 33.5 bits (73), Expect = 0.059
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +2
Query: 146 LDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQ 325
+D+S ++I V + LN++K+L + L N + + FSD + LD S +IS +
Sbjct: 429 VDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLF 488
Query: 326 PGVF 337
F
Sbjct: 489 KDAF 492
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 30.7 bits (66), Expect = 0.42
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 191 LNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQPGVF 337
L + K+L L L NN + F L+S++ L+ +IS + PG F
Sbjct: 273 LEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGAF 321
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 143 ILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFS 268
+LD+S + T++ K L+ + L L N I + GAF+
Sbjct: 281 VLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGAFA 322
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 30.7 bits (66), Expect = 0.42
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 191 LNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQPGVF 337
L + K+L L L NN + F L+S++ L+ +IS + PG F
Sbjct: 273 LEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGAF 321
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 143 ILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFS 268
+LD+S + T++ K L+ + L L N I + GAF+
Sbjct: 281 VLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGAFA 322
>Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical
protein T01G9.3 protein.
Length = 603
Score = 29.9 bits (64), Expect = 0.73
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +2
Query: 134 SVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKI 313
S+ +LD+ + I + + + +L L L N++ L G F+ L+++R L S I
Sbjct: 112 SLEVLDLHSNNIEHATMSNFGGMPKLRVLDLSSNHLNILPTGVFTYLRALRSLSLSNNTI 171
Query: 314 SYIQPGVFK 340
S + + +
Sbjct: 172 SDLSTNLLR 180
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 200 LKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYIQPGVF 337
L L+ L L+ NNI + F + +R LD S ++ + GVF
Sbjct: 110 LPSLEVLDLHSNNIEHATMSNFGGMPKLRVLDLSSNHLNILPTGVF 155
>AF003132-2|AAB54134.2| 568|Caenorhabditis elegans Hypothetical
protein F37E3.2 protein.
Length = 568
Score = 29.9 bits (64), Expect = 0.73
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +2
Query: 128 NSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXX 307
N + L +S + IT + H L L L L + I + +F LKS+R+LD
Sbjct: 286 NIKLKWLKLSRTNITTLTPDHFYGLNALKTLSLSRMPIQSISPYSFVPLKSLRYLDMDSC 345
Query: 308 KISYIQPGV 334
++ I V
Sbjct: 346 NLTKIPQAV 354
>AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 protein
protein.
Length = 679
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 203 KRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYI 322
++L+DL L NNI +L+ FS L+ +R LD S +++ +
Sbjct: 36 RKLEDLNLTMNNIKELDHRLFS-LRHLRILDVSDNELAVL 74
>AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal protein
413, isoform a protein.
Length = 679
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 203 KRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYI 322
++L+DL L NNI +L+ FS L+ +R LD S +++ +
Sbjct: 36 RKLEDLNLTMNNIKELDHRLFS-LRHLRILDVSDNELAVL 74
>AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protein
413, isoform b protein.
Length = 699
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 203 KRLDDLKLYKNNIIKLEVGAFSDLKSMRFLDWSXXKISYI 322
++L+DL L NNI +L+ FS L+ +R LD S +++ +
Sbjct: 36 RKLEDLNLTMNNIKELDHRLFS-LRHLRILDVSDNELAVL 74
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 125 GNSSVAILDISCSKITNVQKLHLNELKRLDDLKLYKNNIIKL 250
G S +AI ++ + QK+ N K+LD+ K +N ++ L
Sbjct: 378 GRSGIAITVVTQYDVEAYQKIEANLGKKLDEYKCVENEVMVL 419
>Z77663-11|CAB01211.3| 324|Caenorhabditis elegans Hypothetical
protein F53F4.12 protein.
Length = 324
Score = 26.2 bits (55), Expect = 9.0
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 152 ISCSKITNVQKLHLNELKRLDDLKLYKNNIIK 247
+SCSK+ N + ELKR L L N+IIK
Sbjct: 52 VSCSKVKNGYRNLGAELKRKVPLILVDNDIIK 83
>Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical
protein C08B6.1b protein.
Length = 540
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 135 DEFPRPINDILGSXPEIISLFKYMDDFTIFA 43
DEF + D+ S PEI ++KY + + A
Sbjct: 320 DEFKKSFLDVFASMPEITFIWKYEQENSTIA 350
>Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical
protein C08B6.1a protein.
Length = 536
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 135 DEFPRPINDILGSXPEIISLFKYMDDFTIFA 43
DEF + D+ S PEI ++KY + + A
Sbjct: 320 DEFKKSFLDVFASMPEITFIWKYEQENSTIA 350
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,147,556
Number of Sequences: 27780
Number of extensions: 143149
Number of successful extensions: 555
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -