Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304H02f
         (405 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   3.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   3.0  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   7.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   9.3  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    20   9.3  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    20   9.3  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 147 RIATDEFPRPINDILGSXPEIISLFKYMD 61
           R   DEFP+P + ++ +   +    KY D
Sbjct: 271 RDVLDEFPQPKHMLIEAYTNLSMTMKYYD 299


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 147 RIATDEFPRPINDILGSXPEIISLFKYMD 61
           R   DEFP+P + ++ +   +    KY D
Sbjct: 271 RDVLDEFPQPKHMLIEAYTNLSMTMKYYD 299


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 351 YCIPLTSHTIY 383
           Y  PLTSH++Y
Sbjct: 267 YYSPLTSHSLY 277


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 179 QKLHLNELKRLDDLKLYKNNIIKLE 253
           +KL L   +     +  KNN++KLE
Sbjct: 505 EKLRLETKELFSSQQKTKNNLMKLE 529


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 158 CSKITNVQKLHLNEL 202
           C K T +QK +L++L
Sbjct: 75  CKKCTEIQKQNLDKL 89


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 158 CSKITNVQKLHLNEL 202
           C K T +QK +L++L
Sbjct: 75  CKKCTEIQKQNLDKL 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,851
Number of Sequences: 438
Number of extensions: 1646
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)